Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= br--1502
(716 letters)
Database: tribolium
336 sequences; 122,585 total letters
Searching.......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase ... 23 1.9
AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase ... 23 1.9
AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase ... 23 1.9
AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase ... 23 1.9
AM292369-1|CAL23181.1| 408|Tribolium castaneum gustatory recept... 23 3.3
AY362543-1|AAQ63455.1| 677|Tribolium castaneum chitin synthase ... 22 4.3
AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase ... 22 4.3
AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase ... 22 4.3
AJ850297-1|CAH64517.1| 539|Tribolium castaneum putative esteras... 22 4.3
AJ850295-1|CAH64515.1| 539|Tribolium castaneum putative esteras... 22 4.3
>AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase
variant 2 protein.
Length = 1558
Score = 23.4 bits (48), Expect = 1.9
Identities = 9/17 (52%), Positives = 10/17 (58%)
Frame = -3
Query: 672 YFFYQHLMVHHCLAFFV 622
YF Y + V CL FFV
Sbjct: 296 YFIYMFVSVWKCLLFFV 312
Score = 22.6 bits (46), Expect = 3.3
Identities = 13/36 (36%), Positives = 17/36 (47%)
Frame = -1
Query: 716 RVPRACDFPKSKGHFISFISI*WFTTVLHFL*FAIV 609
R R C F SK S I +FT LH + A++
Sbjct: 149 RSSRMCFFKSSKKPAFSHFLIVFFTETLHTVGIALL 184
>AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase
variant 1 protein.
Length = 1558
Score = 23.4 bits (48), Expect = 1.9
Identities = 9/17 (52%), Positives = 10/17 (58%)
Frame = -3
Query: 672 YFFYQHLMVHHCLAFFV 622
YF Y + V CL FFV
Sbjct: 296 YFIYMFVSVWKCLLFFV 312
Score = 22.6 bits (46), Expect = 3.3
Identities = 13/36 (36%), Positives = 17/36 (47%)
Frame = -1
Query: 716 RVPRACDFPKSKGHFISFISI*WFTTVLHFL*FAIV 609
R R C F SK S I +FT LH + A++
Sbjct: 149 RSSRMCFFKSSKKPAFSHFLIVFFTETLHTVGIALL 184
>AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase
CHS1B protein.
Length = 1558
Score = 23.4 bits (48), Expect = 1.9
Identities = 9/17 (52%), Positives = 10/17 (58%)
Frame = -3
Query: 672 YFFYQHLMVHHCLAFFV 622
YF Y + V CL FFV
Sbjct: 296 YFIYMFVSVWKCLLFFV 312
Score = 22.6 bits (46), Expect = 3.3
Identities = 13/36 (36%), Positives = 17/36 (47%)
Frame = -1
Query: 716 RVPRACDFPKSKGHFISFISI*WFTTVLHFL*FAIV 609
R R C F SK S I +FT LH + A++
Sbjct: 149 RSSRMCFFKSSKKPAFSHFLIVFFTETLHTVGIALL 184
>AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase
CHS1A protein.
Length = 1558
Score = 23.4 bits (48), Expect = 1.9
Identities = 9/17 (52%), Positives = 10/17 (58%)
Frame = -3
Query: 672 YFFYQHLMVHHCLAFFV 622
YF Y + V CL FFV
Sbjct: 296 YFIYMFVSVWKCLLFFV 312
Score = 22.6 bits (46), Expect = 3.3
Identities = 13/36 (36%), Positives = 17/36 (47%)
Frame = -1
Query: 716 RVPRACDFPKSKGHFISFISI*WFTTVLHFL*FAIV 609
R R C F SK S I +FT LH + A++
Sbjct: 149 RSSRMCFFKSSKKPAFSHFLIVFFTETLHTVGIALL 184
>AM292369-1|CAL23181.1| 408|Tribolium castaneum gustatory receptor
candidate 48 protein.
Length = 408
Score = 22.6 bits (46), Expect = 3.3
Identities = 9/26 (34%), Positives = 16/26 (61%)
Frame = +1
Query: 586 ILIPINSQTMANYKKCKTVVNHQMLI 663
+++PI SQ + KK + HQ+L+
Sbjct: 213 LVLPIYSQLVFMCKKINKLYGHQLLL 238
>AY362543-1|AAQ63455.1| 677|Tribolium castaneum chitin synthase
protein.
Length = 677
Score = 22.2 bits (45), Expect = 4.3
Identities = 12/28 (42%), Positives = 15/28 (53%)
Frame = -3
Query: 672 YFFYQHLMVHHCLAFFVICHSLRIYRYQ 589
YF Y + CLAFF C +L I+ Q
Sbjct: 53 YFIYAFVAPVKCLAFF--CTALVIFYCQ 78
>AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase
protein.
Length = 1464
Score = 22.2 bits (45), Expect = 4.3
Identities = 12/28 (42%), Positives = 15/28 (53%)
Frame = -3
Query: 672 YFFYQHLMVHHCLAFFVICHSLRIYRYQ 589
YF Y + CLAFF C +L I+ Q
Sbjct: 286 YFIYAFVAPVKCLAFF--CTALVIFYCQ 311
>AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase
CHS2 protein.
Length = 1464
Score = 22.2 bits (45), Expect = 4.3
Identities = 12/28 (42%), Positives = 15/28 (53%)
Frame = -3
Query: 672 YFFYQHLMVHHCLAFFVICHSLRIYRYQ 589
YF Y + CLAFF C +L I+ Q
Sbjct: 286 YFIYAFVAPVKCLAFF--CTALVIFYCQ 311
>AJ850297-1|CAH64517.1| 539|Tribolium castaneum putative esterase
protein.
Length = 539
Score = 22.2 bits (45), Expect = 4.3
Identities = 9/31 (29%), Positives = 16/31 (51%)
Frame = +2
Query: 122 DTKWLMPNGNPTGIYVYNCIANQRVPIILND 214
D W++ N G+Y N I + + +L+D
Sbjct: 312 DVPWIVSFTNSEGLYAINEIYDNALLALLDD 342
>AJ850295-1|CAH64515.1| 539|Tribolium castaneum putative esterase
protein.
Length = 539
Score = 22.2 bits (45), Expect = 4.3
Identities = 9/31 (29%), Positives = 16/31 (51%)
Frame = +2
Query: 122 DTKWLMPNGNPTGIYVYNCIANQRVPIILND 214
D W++ N G+Y N I + + +L+D
Sbjct: 312 DVPWIVSFTNSEGLYAINEIYDNALLALLDD 342
Database: tribolium
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 122,585
Number of sequences in database: 336
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 180,187
Number of Sequences: 336
Number of extensions: 4215
Number of successful extensions: 16
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 16
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 19051215
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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