Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= br--1498
(809 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_P78371 Cluster: T-complex protein 1 subunit beta; n=145... 69 1e-10
UniRef50_UPI0000E4850D Cluster: PREDICTED: hypothetical protein;... 56 1e-06
UniRef50_A2XJL6 Cluster: Putative uncharacterized protein; n=1; ... 54 6e-06
UniRef50_Q4MYW8 Cluster: T-complex protein 1, beta subunit, puta... 52 1e-05
UniRef50_Q8SQP2 Cluster: T COMPLEX PROTEIN 1 BETA SUBUNIT; n=1; ... 46 0.001
UniRef50_P50016 Cluster: Thermosome subunit; n=20; Archaea|Rep: ... 44 0.005
UniRef50_Q99832 Cluster: T-complex protein 1 subunit eta; n=135;... 42 0.024
UniRef50_A6R7B6 Cluster: Putative uncharacterized protein; n=1; ... 41 0.032
UniRef50_Q7ZTS3 Cluster: Cct7 protein; n=17; Deuterostomia|Rep: ... 40 0.056
UniRef50_A2FL92 Cluster: TCP-1/cpn60 chaperonin family protein; ... 40 0.074
UniRef50_A7PW56 Cluster: Chromosome chr8 scaffold_34, whole geno... 39 0.13
UniRef50_P50991 Cluster: T-complex protein 1 subunit delta; n=13... 39 0.17
UniRef50_O30560 Cluster: Thermosome subunit 2; n=8; Euryarchaeot... 38 0.30
UniRef50_A2ESJ6 Cluster: T-complex protein 1, alpha subunit; n=8... 38 0.40
UniRef50_Q9HHA2 Cluster: Thermosome subunit 3; n=5; root|Rep: Th... 38 0.40
UniRef50_Q1VNP5 Cluster: HSP60 family chaperonin; n=1; Psychrofl... 37 0.52
UniRef50_Q2FPE0 Cluster: Chaperonin Cpn60/TCP-1; n=4; Methanomic... 37 0.52
UniRef50_Q184X6 Cluster: Transcription antiterminator; n=1; Clos... 37 0.69
UniRef50_A4CH43 Cluster: Putative uncharacterized protein; n=1; ... 36 0.91
UniRef50_A2Z9B2 Cluster: T-complex protein 1, delta subunit; n=1... 36 0.91
UniRef50_Q9V2Q7 Cluster: Thermosome subunit; n=20; Euryarchaeota... 36 0.91
UniRef50_Q4N6Q7 Cluster: Chaperonin 60 kDa, putative; n=3; Pirop... 36 1.2
UniRef50_P17987 Cluster: T-complex protein 1 subunit alpha; n=21... 36 1.2
UniRef50_Q7NEX9 Cluster: 60 kDa chaperonin; n=1; Gloeobacter vio... 36 1.6
UniRef50_A2DR42 Cluster: Chaperonin subunit zeta CCTzeta; n=2; T... 35 2.1
UniRef50_Q0W8R0 Cluster: Chaperonin Hsp60; n=1; uncultured metha... 35 2.1
UniRef50_Q5Z444 Cluster: Putative uncharacterized protein OSJNBa... 35 2.8
UniRef50_Q8Q0R4 Cluster: Thermosome subunit; n=4; Methanosarcina... 35 2.8
UniRef50_Q9V2T7 Cluster: Thermosome subunit gamma; n=10; Sulfolo... 34 3.7
UniRef50_O24734 Cluster: Thermosome subunit alpha; n=24; Thermop... 34 3.7
UniRef50_P40227 Cluster: T-complex protein 1 subunit zeta; n=71;... 34 4.9
UniRef50_P50990 Cluster: T-complex protein 1 subunit theta; n=76... 34 4.9
UniRef50_UPI00005A1481 Cluster: PREDICTED: similar to T-complex ... 33 6.4
UniRef50_Q4S6V3 Cluster: T-complex protein 1, alpha subunit; n=3... 33 6.4
UniRef50_Q54TP7 Cluster: Putative uncharacterized protein; n=1; ... 33 8.5
UniRef50_A6UV07 Cluster: Tetratricopeptide TPR_2 repeat protein;... 33 8.5
UniRef50_Q9HNI0 Cluster: Thermosome subunit beta; n=13; Euryarch... 33 8.5
UniRef50_Q9N358 Cluster: T-complex protein 1 subunit theta; n=1;... 33 8.5
>UniRef50_P78371 Cluster: T-complex protein 1 subunit beta; n=145;
Eukaryota|Rep: T-complex protein 1 subunit beta - Homo
sapiens (Human)
Length = 535
Score = 68.9 bits (161), Expect = 1e-10
Identities = 29/42 (69%), Positives = 35/42 (83%)
Frame = +1
Query: 124 PSAVADNAGYDSADLIARLRAHHSRGENTMGLDMQNGTVGDM 249
P+ +ADNAGYDSADL+A+LRA HS G T GLDM+ GT+GDM
Sbjct: 447 PTIIADNAGYDSADLVAQLRAAHSEGNTTAGLDMREGTIGDM 488
Score = 56.4 bits (130), Expect = 8e-07
Identities = 27/32 (84%), Positives = 31/32 (96%)
Frame = +3
Query: 255 LGVTESYVVKRQVLLSAAEAAEMILRVDNILK 350
LG+TES+ VKRQVLLSAAEAAE+ILRVDNI+K
Sbjct: 491 LGITESFQVKRQVLLSAAEAAEVILRVDNIIK 522
>UniRef50_UPI0000E4850D Cluster: PREDICTED: hypothetical protein;
n=1; Strongylocentrotus purpuratus|Rep: PREDICTED:
hypothetical protein - Strongylocentrotus purpuratus
Length = 437
Score = 56.0 bits (129), Expect = 1e-06
Identities = 23/41 (56%), Positives = 33/41 (80%)
Frame = +1
Query: 124 PSAVADNAGYDSADLIARLRAHHSRGENTMGLDMQNGTVGD 246
P+ +ADNAGYDSA+L+++LRA H+ G MGL+M GT+G+
Sbjct: 351 PTIIADNAGYDSAELVSQLRAAHTAGNYKMGLNMIEGTIGN 391
Score = 55.6 bits (128), Expect = 1e-06
Identities = 27/33 (81%), Positives = 31/33 (93%)
Frame = +3
Query: 252 ELGVTESYVVKRQVLLSAAEAAEMILRVDNILK 350
ELGV ES+ VKRQV+LSA+EAAEMILRVDNI+K
Sbjct: 394 ELGVLESFQVKRQVVLSASEAAEMILRVDNIIK 426
>UniRef50_A2XJL6 Cluster: Putative uncharacterized protein; n=1;
Oryza sativa (indica cultivar-group)|Rep: Putative
uncharacterized protein - Oryza sativa subsp. indica
(Rice)
Length = 449
Score = 53.6 bits (123), Expect = 6e-06
Identities = 23/43 (53%), Positives = 33/43 (76%)
Frame = +1
Query: 124 PSAVADNAGYDSADLIARLRAHHSRGENTMGLDMQNGTVGDMK 252
P+ +ADNAG DSA+LI++LRA H + T G+D+ G+VGDM+
Sbjct: 364 PTIIADNAGLDSAELISQLRAEHHKENCTAGIDVITGSVGDMQ 406
Score = 43.6 bits (98), Expect = 0.006
Identities = 19/33 (57%), Positives = 28/33 (84%)
Frame = +3
Query: 249 EELGVTESYVVKRQVLLSAAEAAEMILRVDNIL 347
++ G++E++ VK+ +LLSA EAAEMILRVD I+
Sbjct: 406 QKRGISEAFKVKQAILLSATEAAEMILRVDEII 438
>UniRef50_Q4MYW8 Cluster: T-complex protein 1, beta subunit,
putative; n=2; Theileria|Rep: T-complex protein 1, beta
subunit, putative - Theileria parva
Length = 664
Score = 52.4 bits (120), Expect = 1e-05
Identities = 20/42 (47%), Positives = 30/42 (71%)
Frame = +1
Query: 124 PSAVADNAGYDSADLIARLRAHHSRGENTMGLDMQNGTVGDM 249
P + N G+DSAD++ +LRA HS+G + G+D+ G+VGDM
Sbjct: 579 PGYILSNGGFDSADVLCKLRAEHSKGNVSAGIDIDKGSVGDM 620
Score = 35.5 bits (78), Expect = 1.6
Identities = 18/33 (54%), Positives = 23/33 (69%)
Frame = +3
Query: 252 ELGVTESYVVKRQVLLSAAEAAEMILRVDNILK 350
+LGV ESY K + A EAAE I+RVD+I+K
Sbjct: 622 KLGVFESYKSKLSQICLATEAAESIVRVDDIIK 654
>UniRef50_Q8SQP2 Cluster: T COMPLEX PROTEIN 1 BETA SUBUNIT; n=1;
Encephalitozoon cuniculi|Rep: T COMPLEX PROTEIN 1 BETA
SUBUNIT - Encephalitozoon cuniculi
Length = 508
Score = 46.0 bits (104), Expect = 0.001
Identities = 18/43 (41%), Positives = 29/43 (67%)
Frame = +1
Query: 124 PSAVADNAGYDSADLIARLRAHHSRGENTMGLDMQNGTVGDMK 252
P +ADN GY+ + A LRA H+ G + G++++NG++G MK
Sbjct: 424 PKILADNGGYNGESIKASLRAEHNSGRTSYGVNVRNGSIGCMK 466
>UniRef50_P50016 Cluster: Thermosome subunit; n=20; Archaea|Rep:
Thermosome subunit - Methanopyrus kandleri
Length = 545
Score = 44.0 bits (99), Expect = 0.005
Identities = 18/42 (42%), Positives = 28/42 (66%)
Frame = +1
Query: 124 PSAVADNAGYDSADLIARLRAHHSRGENTMGLDMQNGTVGDM 249
P +A+N+G D D++ +LRA H G+ T G+D+ +G V DM
Sbjct: 450 PRTLAENSGLDPIDVLVQLRAKHEDGQVTAGIDVYDGDVKDM 491
Score = 39.1 bits (87), Expect = 0.13
Identities = 19/32 (59%), Positives = 23/32 (71%)
Frame = +3
Query: 252 ELGVTESYVVKRQVLLSAAEAAEMILRVDNIL 347
E GV E VK Q L SA EAAEMILR+D+++
Sbjct: 493 EEGVVEPLRVKTQALASATEAAEMILRIDDVI 524
>UniRef50_Q99832 Cluster: T-complex protein 1 subunit eta; n=135;
Eukaryota|Rep: T-complex protein 1 subunit eta - Homo
sapiens (Human)
Length = 543
Score = 41.5 bits (93), Expect = 0.024
Identities = 15/41 (36%), Positives = 27/41 (65%)
Frame = +1
Query: 124 PSAVADNAGYDSADLIARLRAHHSRGENTMGLDMQNGTVGD 246
P + DNAG+D+ +++ +LRA H++G G+D+ N + D
Sbjct: 446 PRQLCDNAGFDATNILNKLRARHAQGGTWYGVDINNEDIAD 486
>UniRef50_A6R7B6 Cluster: Putative uncharacterized protein; n=1;
Ajellomyces capsulatus NAm1|Rep: Putative
uncharacterized protein - Ajellomyces capsulatus NAm1
Length = 187
Score = 41.1 bits (92), Expect = 0.032
Identities = 17/41 (41%), Positives = 24/41 (58%)
Frame = +1
Query: 124 PSAVADNAGYDSADLIARLRAHHSRGENTMGLDMQNGTVGD 246
P + DNAG+D+ D++ RLR H +G G+D N V D
Sbjct: 131 PRQLCDNAGFDATDILNRLRVEHRKGNVWAGVDFDNEGVRD 171
>UniRef50_Q7ZTS3 Cluster: Cct7 protein; n=17; Deuterostomia|Rep:
Cct7 protein - Danio rerio (Zebrafish) (Brachydanio
rerio)
Length = 422
Score = 40.3 bits (90), Expect = 0.056
Identities = 15/41 (36%), Positives = 27/41 (65%)
Frame = +1
Query: 124 PSAVADNAGYDSADLIARLRAHHSRGENTMGLDMQNGTVGD 246
P + DNAG+D+ +++ +LRA H++G G+D+ N + D
Sbjct: 321 PRQLCDNAGFDATNILNKLRAKHAQGGMWYGVDVNNEDIAD 361
>UniRef50_A2FL92 Cluster: TCP-1/cpn60 chaperonin family protein;
n=3; Trichomonas vaginalis G3|Rep: TCP-1/cpn60
chaperonin family protein - Trichomonas vaginalis G3
Length = 537
Score = 39.9 bits (89), Expect = 0.074
Identities = 14/41 (34%), Positives = 30/41 (73%)
Frame = +1
Query: 124 PSAVADNAGYDSADLIARLRAHHSRGENTMGLDMQNGTVGD 246
P +A+N+G ++ +A++RA H++GE++ G+D+ N +G+
Sbjct: 444 PRTIAENSGIRISEFMAKIRASHNKGESSSGVDVINMDIGN 484
>UniRef50_A7PW56 Cluster: Chromosome chr8 scaffold_34, whole genome
shotgun sequence; n=8; Eukaryota|Rep: Chromosome chr8
scaffold_34, whole genome shotgun sequence - Vitis
vinifera (Grape)
Length = 545
Score = 39.1 bits (87), Expect = 0.13
Identities = 15/39 (38%), Positives = 25/39 (64%)
Frame = +1
Query: 124 PSAVADNAGYDSADLIARLRAHHSRGENTMGLDMQNGTV 240
P +A+NAG ++ ++I+ L A HS G +G+D+ G V
Sbjct: 451 PKTLAENAGLNAMEIISSLYAEHSTGNTKVGIDLDQGVV 489
>UniRef50_P50991 Cluster: T-complex protein 1 subunit delta; n=138;
Eukaryota|Rep: T-complex protein 1 subunit delta - Homo
sapiens (Human)
Length = 539
Score = 38.7 bits (86), Expect = 0.17
Identities = 14/42 (33%), Positives = 27/42 (64%)
Frame = +1
Query: 124 PSAVADNAGYDSADLIARLRAHHSRGENTMGLDMQNGTVGDM 249
PS +A+NAG + + LR H++GE T G++++ G + ++
Sbjct: 462 PSTLAENAGLNPISTVTELRNRHAQGEKTAGINVRKGGISNI 503
>UniRef50_O30560 Cluster: Thermosome subunit 2; n=8;
Euryarchaeota|Rep: Thermosome subunit 2 - Halobacterium
volcanii (Haloferax volcanii)
Length = 557
Score = 37.9 bits (84), Expect = 0.30
Identities = 18/41 (43%), Positives = 24/41 (58%)
Frame = +1
Query: 124 PSAVADNAGYDSADLIARLRAHHSRGENTMGLDMQNGTVGD 246
P +A+NAG DS D + LRA H G+ GL++ G V D
Sbjct: 449 PRVLAENAGLDSIDTLVDLRAAHEDGQVRAGLNVFTGEVED 489
>UniRef50_A2ESJ6 Cluster: T-complex protein 1, alpha subunit; n=8;
Eukaryota|Rep: T-complex protein 1, alpha subunit -
Trichomonas vaginalis G3
Length = 543
Score = 37.5 bits (83), Expect = 0.40
Identities = 25/58 (43%), Positives = 33/58 (56%), Gaps = 6/58 (10%)
Frame = +1
Query: 124 PSAVADNAGYDSADLIARLRAHH----SRGENTM-GLDMQNGTVGD-MKNWV*PSRMS 279
P +A+NA DS DL+A+LRA H +GE LD+ NG + D MK+ V MS
Sbjct: 450 PKILANNAALDSIDLVAKLRAAHYEAQQKGEKCFAALDLVNGKIRDGMKDGVIEPGMS 507
>UniRef50_Q9HHA2 Cluster: Thermosome subunit 3; n=5; root|Rep:
Thermosome subunit 3 - Halobacterium volcanii (Haloferax
volcanii)
Length = 524
Score = 37.5 bits (83), Expect = 0.40
Identities = 16/32 (50%), Positives = 24/32 (75%)
Frame = +3
Query: 252 ELGVTESYVVKRQVLLSAAEAAEMILRVDNIL 347
ELGV + VKR+ + SA EAA MI+R+D+++
Sbjct: 490 ELGVIDPVAVKREAIESATEAATMIVRIDDVI 521
>UniRef50_Q1VNP5 Cluster: HSP60 family chaperonin; n=1;
Psychroflexus torquis ATCC 700755|Rep: HSP60 family
chaperonin - Psychroflexus torquis ATCC 700755
Length = 131
Score = 37.1 bits (82), Expect = 0.52
Identities = 16/44 (36%), Positives = 26/44 (59%)
Frame = +1
Query: 124 PSAVADNAGYDSADLIARLRAHHSRGENTMGLDMQNGTVGDMKN 255
P+ +A+NAG+D D + LR S G G D++NG + M++
Sbjct: 52 PATIAENAGHDPLDCLLSLRHAISEGRIQFGPDVENGGITSMQD 95
>UniRef50_Q2FPE0 Cluster: Chaperonin Cpn60/TCP-1; n=4;
Methanomicrobiales|Rep: Chaperonin Cpn60/TCP-1 -
Methanospirillum hungatei (strain JF-1 / DSM 864)
Length = 532
Score = 37.1 bits (82), Expect = 0.52
Identities = 14/43 (32%), Positives = 26/43 (60%)
Frame = +1
Query: 124 PSAVADNAGYDSADLIARLRAHHSRGENTMGLDMQNGTVGDMK 252
P +A+N+GY+ D + L+ H+ G+ GL++ G + DM+
Sbjct: 444 PITLAENSGYNPIDKLVELKKAHAEGKKNFGLNVYTGKLVDMQ 486
Score = 33.9 bits (74), Expect = 4.9
Identities = 17/49 (34%), Positives = 29/49 (59%)
Frame = +3
Query: 201 RKHYGIRYAKRHCW*YEELGVTESYVVKRQVLLSAAEAAEMILRVDNIL 347
+K++G+ ++ GV E KRQ + S+ EA EM+LRVD+++
Sbjct: 470 KKNFGLNVYTGKLVDMQKEGVIEPIRCKRQAIQSSEEAVEMLLRVDDMM 518
>UniRef50_Q184X6 Cluster: Transcription antiterminator; n=1;
Clostridium difficile 630|Rep: Transcription
antiterminator - Clostridium difficile (strain 630)
Length = 277
Score = 36.7 bits (81), Expect = 0.69
Identities = 18/63 (28%), Positives = 34/63 (53%)
Frame = +2
Query: 584 IKKKLM*NIPQSDVNQLALNFLDVPIRECGVQKIIWFTYNTRVISIISKLNYGLNIKAYN 763
++KKL NIP S++ + ++F + + +Q+ + T + I K +YG+ I Y+
Sbjct: 140 LRKKLDKNIPDSEIAFITIHFANAQLETKDMQETLLLTKIIDNVLDIIKYHYGIEINEYS 199
Query: 764 CDY 772
DY
Sbjct: 200 FDY 202
>UniRef50_A4CH43 Cluster: Putative uncharacterized protein; n=1;
Robiginitalea biformata HTCC2501|Rep: Putative
uncharacterized protein - Robiginitalea biformata
HTCC2501
Length = 271
Score = 36.3 bits (80), Expect = 0.91
Identities = 17/42 (40%), Positives = 24/42 (57%)
Frame = -3
Query: 435 VTVLFGMMVFSEEKLNMGDGRVRGVWVLPSECYRHEESSRPL 310
V V F + VF NM + + G+W L + +RH+ESS PL
Sbjct: 187 VLVAFALNVFMVLSRNMREFALVGIWALAAIAFRHQESSGPL 228
>UniRef50_A2Z9B2 Cluster: T-complex protein 1, delta subunit; n=1;
Oryza sativa (indica cultivar-group)|Rep: T-complex
protein 1, delta subunit - Oryza sativa subsp. indica
(Rice)
Length = 517
Score = 36.3 bits (80), Expect = 0.91
Identities = 12/39 (30%), Positives = 24/39 (61%)
Frame = +1
Query: 124 PSAVADNAGYDSADLIARLRAHHSRGENTMGLDMQNGTV 240
P +++NAG D ++ LR H++GE G++++ G +
Sbjct: 440 PYTLSENAGLDPISIVTELRNRHAKGEKNAGINVRKGRI 478
>UniRef50_Q9V2Q7 Cluster: Thermosome subunit; n=20;
Euryarchaeota|Rep: Thermosome subunit - Pyrococcus
abyssi
Length = 550
Score = 36.3 bits (80), Expect = 0.91
Identities = 17/32 (53%), Positives = 24/32 (75%)
Frame = +3
Query: 252 ELGVTESYVVKRQVLLSAAEAAEMILRVDNIL 347
E GV E VK+Q + SA+EAA MILR+D+++
Sbjct: 491 ERGVIEPVRVKKQAIKSASEAAIMILRIDDVI 522
Score = 33.5 bits (73), Expect = 6.4
Identities = 14/42 (33%), Positives = 23/42 (54%)
Frame = +1
Query: 124 PSAVADNAGYDSADLIARLRAHHSRGENTMGLDMQNGTVGDM 249
P +A+NAG D + + ++ A H T+G+D+ G DM
Sbjct: 448 PRTLAENAGLDPIETLVKVIAAHKEKGPTIGIDVYEGEPADM 489
>UniRef50_Q4N6Q7 Cluster: Chaperonin 60 kDa, putative; n=3;
Piroplasmida|Rep: Chaperonin 60 kDa, putative -
Theileria parva
Length = 551
Score = 35.9 bits (79), Expect = 1.2
Identities = 15/41 (36%), Positives = 23/41 (56%)
Frame = +1
Query: 124 PSAVADNAGYDSADLIARLRAHHSRGENTMGLDMQNGTVGD 246
P +A NAG D L+ L + H G+N +D++ G+ GD
Sbjct: 459 PKILATNAGVDCETLLTNLLSLHENGKNNSCVDVETGSCGD 499
>UniRef50_P17987 Cluster: T-complex protein 1 subunit alpha; n=218;
root|Rep: T-complex protein 1 subunit alpha - Homo
sapiens (Human)
Length = 556
Score = 35.9 bits (79), Expect = 1.2
Identities = 20/51 (39%), Positives = 28/51 (54%), Gaps = 8/51 (15%)
Frame = +1
Query: 124 PSAVADNAGYDSADLIARLRAHHSRGE--------NTMGLDMQNGTVGDMK 252
P+ +A NA DS DL+A+LRA H+ + +GLD+ NG D K
Sbjct: 449 PNTLAVNAAQDSTDLVAKLRAFHNEAQVNPERKNLKWIGLDLSNGKPRDNK 499
>UniRef50_Q7NEX9 Cluster: 60 kDa chaperonin; n=1; Gloeobacter
violaceus|Rep: 60 kDa chaperonin - Gloeobacter violaceus
Length = 505
Score = 35.5 bits (78), Expect = 1.6
Identities = 15/40 (37%), Positives = 25/40 (62%), Gaps = 1/40 (2%)
Frame = +1
Query: 133 VADNAGYDSADLIARLRAHHSRGENT-MGLDMQNGTVGDM 249
+ N+GY + + +A+L A H R N +G+D +NG V D+
Sbjct: 423 IVSNSGYSALEKVAQLEAMHQRTANPHLGIDCENGEVVDL 462
>UniRef50_A2DR42 Cluster: Chaperonin subunit zeta CCTzeta; n=2;
Trichomonas vaginalis|Rep: Chaperonin subunit zeta
CCTzeta - Trichomonas vaginalis G3
Length = 528
Score = 35.1 bits (77), Expect = 2.1
Identities = 16/43 (37%), Positives = 26/43 (60%)
Frame = +1
Query: 124 PSAVADNAGYDSADLIARLRAHHSRGENTMGLDMQNGTVGDMK 252
P +A NAG+D+ D + L+A +GE G+D++ G + D K
Sbjct: 447 PRVLAQNAGHDAVDCLVALQAAADKGE-VKGIDLETGELLDPK 488
>UniRef50_Q0W8R0 Cluster: Chaperonin Hsp60; n=1; uncultured
methanogenic archaeon RC-I|Rep: Chaperonin Hsp60 -
Uncultured methanogenic archaeon RC-I
Length = 536
Score = 35.1 bits (77), Expect = 2.1
Identities = 20/48 (41%), Positives = 28/48 (58%)
Frame = +3
Query: 204 KHYGIRYAKRHCW*YEELGVTESYVVKRQVLLSAAEAAEMILRVDNIL 347
K++G+ K + GV E +K Q + SA EAA MILR+D+IL
Sbjct: 476 KNFGLNVYKGKPMDMLKEGVVEPMKLKTQAIQSATEAAIMILRIDDIL 523
>UniRef50_Q5Z444 Cluster: Putative uncharacterized protein
OSJNBa0061G23.31; n=1; Oryza sativa (japonica
cultivar-group)|Rep: Putative uncharacterized protein
OSJNBa0061G23.31 - Oryza sativa subsp. japonica (Rice)
Length = 404
Score = 34.7 bits (76), Expect = 2.8
Identities = 20/45 (44%), Positives = 25/45 (55%)
Frame = +1
Query: 250 KNWV*PSRMS*RDRSCCLRLKRPR*FFVSITF*RQHPDAADPTVA 384
+N + P+R R R+CCLRL PR SITF R A P +A
Sbjct: 240 RNAICPARGELRRRACCLRLPTPRSPNPSITFLRSRRPLAAPLLA 284
>UniRef50_Q8Q0R4 Cluster: Thermosome subunit; n=4;
Methanosarcinaceae|Rep: Thermosome subunit -
Methanosarcina mazei (Methanosarcina frisia)
Length = 567
Score = 34.7 bits (76), Expect = 2.8
Identities = 17/42 (40%), Positives = 24/42 (57%)
Frame = +1
Query: 124 PSAVADNAGYDSADLIARLRAHHSRGENTMGLDMQNGTVGDM 249
P +A NAG D+ + I LRA H+ +N GL++ G DM
Sbjct: 463 PRTIARNAGLDTINTIVNLRAKHADNKNA-GLNVLTGAAEDM 503
>UniRef50_Q9V2T7 Cluster: Thermosome subunit gamma; n=10;
Sulfolobus|Rep: Thermosome subunit gamma - Sulfolobus
solfataricus
Length = 535
Score = 34.3 bits (75), Expect = 3.7
Identities = 17/32 (53%), Positives = 23/32 (71%)
Frame = +3
Query: 252 ELGVTESYVVKRQVLLSAAEAAEMILRVDNIL 347
EL V +S VK QVL SA EAA IL++D+++
Sbjct: 485 ELRVIDSLKVKEQVLKSATEAATAILKIDDMI 516
>UniRef50_O24734 Cluster: Thermosome subunit alpha; n=24;
Thermoprotei|Rep: Thermosome subunit alpha - Sulfolobus
tokodaii
Length = 559
Score = 34.3 bits (75), Expect = 3.7
Identities = 14/41 (34%), Positives = 23/41 (56%)
Frame = +1
Query: 124 PSAVADNAGYDSADLIARLRAHHSRGENTMGLDMQNGTVGD 246
P +A+ AG + + LRA H++G G+D+ NG + D
Sbjct: 454 PMILAETAGMEPIQTLMDLRAKHAKGLINAGVDVMNGKIAD 494
>UniRef50_P40227 Cluster: T-complex protein 1 subunit zeta; n=71;
Eukaryota|Rep: T-complex protein 1 subunit zeta - Homo
sapiens (Human)
Length = 531
Score = 33.9 bits (74), Expect = 4.9
Identities = 11/37 (29%), Positives = 22/37 (59%)
Frame = +1
Query: 124 PSAVADNAGYDSADLIARLRAHHSRGENTMGLDMQNG 234
P +A N+G+D + + +++A HS +G+D+ G
Sbjct: 448 PKVLAQNSGFDLQETLVKIQAEHSESGQLVGVDLNTG 484
>UniRef50_P50990 Cluster: T-complex protein 1 subunit theta; n=76;
Eukaryota|Rep: T-complex protein 1 subunit theta - Homo
sapiens (Human)
Length = 548
Score = 33.9 bits (74), Expect = 4.9
Identities = 13/35 (37%), Positives = 24/35 (68%)
Frame = +1
Query: 124 PSAVADNAGYDSADLIARLRAHHSRGENTMGLDMQ 228
P A+A+N+G + ++I++L A H G +GLD++
Sbjct: 449 PRALAENSGVKANEVISKLYAVHQEGNKNVGLDIE 483
>UniRef50_UPI00005A1481 Cluster: PREDICTED: similar to T-complex
protein 1, zeta subunit (TCP-1-zeta) (CCT-zeta)
(CCT-zeta-1); n=3; Canis lupus familiaris|Rep:
PREDICTED: similar to T-complex protein 1, zeta subunit
(TCP-1-zeta) (CCT-zeta) (CCT-zeta-1) - Canis familiaris
Length = 514
Score = 33.5 bits (73), Expect = 6.4
Identities = 11/37 (29%), Positives = 22/37 (59%)
Frame = +1
Query: 124 PSAVADNAGYDSADLIARLRAHHSRGENTMGLDMQNG 234
P +A N+G+D + + +++A HS +G+D+ G
Sbjct: 431 PKVLAQNSGFDLQETLVKVQAEHSESGQLVGVDLNTG 467
>UniRef50_Q4S6V3 Cluster: T-complex protein 1, alpha subunit; n=3;
Euteleostomi|Rep: T-complex protein 1, alpha subunit -
Tetraodon nigroviridis (Green puffer)
Length = 532
Score = 33.5 bits (73), Expect = 6.4
Identities = 19/49 (38%), Positives = 26/49 (53%), Gaps = 8/49 (16%)
Frame = +1
Query: 124 PSAVADNAGYDSADLIARLRAHHSRGE--------NTMGLDMQNGTVGD 246
P +A NA DS DL+A+LRA H+ + +GLD+ NG D
Sbjct: 428 PKTLAVNAAQDSTDLVAKLRAFHNEAQVNPERKNLKWIGLDLVNGKPRD 476
>UniRef50_Q54TP7 Cluster: Putative uncharacterized protein; n=1;
Dictyostelium discoideum AX4|Rep: Putative
uncharacterized protein - Dictyostelium discoideum AX4
Length = 804
Score = 33.1 bits (72), Expect = 8.5
Identities = 17/49 (34%), Positives = 24/49 (48%)
Frame = +3
Query: 408 KPSSQIKQ*H*GKPYNRGHSNILIQLAPKNNISIYMGIKVLYSFPGIFS 554
K ++KQ H P+N+GH +LI KN I + + F IFS
Sbjct: 112 KLEKEVKQQHDNNPFNKGHPILLINNDNKNEILFWKVFRNKLIFKNIFS 160
>UniRef50_A6UV07 Cluster: Tetratricopeptide TPR_2 repeat protein;
n=1; Methanococcus aeolicus Nankai-3|Rep:
Tetratricopeptide TPR_2 repeat protein - Methanococcus
aeolicus Nankai-3
Length = 723
Score = 33.1 bits (72), Expect = 8.5
Identities = 13/26 (50%), Positives = 19/26 (73%)
Frame = +2
Query: 668 CGVQKIIWFTYNTRVISIISKLNYGL 745
CG++KI++ YN I+ IS+ NYGL
Sbjct: 247 CGLKKIVYEIYNEEGINAISEFNYGL 272
>UniRef50_Q9HNI0 Cluster: Thermosome subunit beta; n=13;
Euryarchaeota|Rep: Thermosome subunit beta -
Halobacterium salinarium (Halobacterium halobium)
Length = 556
Score = 33.1 bits (72), Expect = 8.5
Identities = 14/32 (43%), Positives = 22/32 (68%)
Frame = +3
Query: 252 ELGVTESYVVKRQVLLSAAEAAEMILRVDNIL 347
E GV E K Q + SA+EAA ++L++D+I+
Sbjct: 494 EAGVVEPAHAKEQAVTSASEAANLVLKIDDII 525
>UniRef50_Q9N358 Cluster: T-complex protein 1 subunit theta; n=1;
Caenorhabditis elegans|Rep: T-complex protein 1 subunit
theta - Caenorhabditis elegans
Length = 581
Score = 33.1 bits (72), Expect = 8.5
Identities = 12/34 (35%), Positives = 21/34 (61%)
Frame = +1
Query: 124 PSAVADNAGYDSADLIARLRAHHSRGENTMGLDM 225
P A+A+NAG + + + +L A H G+ G+D+
Sbjct: 482 PKAIAENAGMPTTETLTKLYAEHVAGKKNAGIDI 515
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 711,493,041
Number of Sequences: 1657284
Number of extensions: 14444563
Number of successful extensions: 38931
Number of sequences better than 10.0: 38
Number of HSP's better than 10.0 without gapping: 36967
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 38886
length of database: 575,637,011
effective HSP length: 99
effective length of database: 411,565,895
effective search space used: 69966202150
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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