Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= br--1497
         (832 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292377-1|CAL23189.2|  358|Tribolium castaneum gustatory recept...    23   3.9  
AM292342-1|CAL23154.2|  386|Tribolium castaneum gustatory recept...    23   3.9  
AF322227-1|AAK01654.1|  782|Tribolium castaneum cell surface pro...    23   3.9  
AY618898-1|AAU87291.1|  803|Tribolium castaneum receptor tyrosin...    21   9.1  
AJ876407-1|CAI45288.1|  590|Tribolium castaneum phosphatase prot...    21   9.1  

>AM292377-1|CAL23189.2|  358|Tribolium castaneum gustatory receptor
           candidate 56 protein.
          Length = 358

 Score = 22.6 bits (46), Expect = 3.9
 Identities = 9/20 (45%), Positives = 14/20 (70%)
 Frame = +2

Query: 77  ILPCSFYRKQKEICNVYTSI 136
           +LP  F +  K+ C+VYT+I
Sbjct: 1   MLPKQFLKLFKDPCDVYTAI 20


>AM292342-1|CAL23154.2|  386|Tribolium castaneum gustatory receptor
           candidate 21 protein.
          Length = 386

 Score = 22.6 bits (46), Expect = 3.9
 Identities = 9/20 (45%), Positives = 14/20 (70%)
 Frame = +2

Query: 77  ILPCSFYRKQKEICNVYTSI 136
           +LP  F +  K+ C+VYT+I
Sbjct: 1   MLPKQFLKLFKDPCDVYTAI 20


>AF322227-1|AAK01654.1|  782|Tribolium castaneum cell surface
           protein chaoptin protein.
          Length = 782

 Score = 22.6 bits (46), Expect = 3.9
 Identities = 14/44 (31%), Positives = 21/44 (47%)
 Frame = -1

Query: 718 NIKTLKSSGLKLRSLHRFSMPSAKIASSIESLYWLNNRFILVSD 587
           ++ TLK +     S+  F   + KI + +E L   NNR   V D
Sbjct: 16  SLLTLKLTHALSSSVQNFPSDAIKILNRLEELDLSNNRLRNVPD 59


>AY618898-1|AAU87291.1|  803|Tribolium castaneum receptor tyrosine
           kinase Torso-likeprotein protein.
          Length = 803

 Score = 21.4 bits (43), Expect = 9.1
 Identities = 8/20 (40%), Positives = 11/20 (55%)
 Frame = +3

Query: 669 LCNDLNLSPDDFKVLILAWK 728
           L    N SPD + V++  WK
Sbjct: 713 LARPANCSPDLYAVMLNCWK 732


>AJ876407-1|CAI45288.1|  590|Tribolium castaneum phosphatase
           protein.
          Length = 590

 Score = 21.4 bits (43), Expect = 9.1
 Identities = 6/19 (31%), Positives = 13/19 (68%)
 Frame = +2

Query: 20  KINSIWYWWILVHIISITE 76
           K+N++   W++ H+ +I E
Sbjct: 444 KLNALCMTWLMDHVFAIRE 462


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 180,206
Number of Sequences: 336
Number of extensions: 3934
Number of successful extensions: 11
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 22829180
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)