Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= br--1497
         (832 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY075303-1|AAL68170.1|  334|Drosophila melanogaster AT31457p pro...    80   3e-15
AE013599-1616|AAF58439.2|  334|Drosophila melanogaster CG13322-P...    80   3e-15
AE013599-1615|AAM68619.1|  334|Drosophila melanogaster CG13322-P...    80   3e-15
AE013599-1614|AAM68618.1|  334|Drosophila melanogaster CG13322-P...    80   3e-15
AY118412-1|AAM48441.1|  288|Drosophila melanogaster RE66446p pro...    45   1e-04
AE014296-2535|AAF49617.2|  288|Drosophila melanogaster CG7427-PA...    45   1e-04
BT012470-1|AAS93741.1|  248|Drosophila melanogaster RE34983p pro...    42   8e-04
AE014296-3319|AAN11626.2|  248|Drosophila melanogaster CG6597-PB...    42   8e-04
AE014296-3318|AAF49037.2|  248|Drosophila melanogaster CG6597-PA...    42   8e-04

>AY075303-1|AAL68170.1|  334|Drosophila melanogaster AT31457p
           protein.
          Length = 334

 Score = 80.2 bits (189), Expect = 3e-15
 Identities = 41/93 (44%), Positives = 60/93 (64%), Gaps = 2/93 (2%)
 Frame = +3

Query: 486 CAEKLSL*KTPKLFNPKLPSIPRTMSS-LGSSEKISETKINLLFNQYKD-SIEDAILAEG 659
           C  K +  K+  L N   P++   +++ +  S ++S   ++ LF+ YKD   E+ IL +G
Sbjct: 78  CDTKRNSFKSLGLLNGSAPTMSDIITTAVQESMEVSHQTLSKLFDVYKDPDDEEMILTDG 137

Query: 660 IENLCNDLNLSPDDFKVLILAWKLNASQMCRFT 758
           IE LCNDLN  PD+F +L+LAW L+ASQMCRFT
Sbjct: 138 IERLCNDLNYQPDEFAILVLAWCLDASQMCRFT 170


>AE013599-1616|AAF58439.2|  334|Drosophila melanogaster CG13322-PC,
           isoform C protein.
          Length = 334

 Score = 80.2 bits (189), Expect = 3e-15
 Identities = 41/93 (44%), Positives = 60/93 (64%), Gaps = 2/93 (2%)
 Frame = +3

Query: 486 CAEKLSL*KTPKLFNPKLPSIPRTMSS-LGSSEKISETKINLLFNQYKD-SIEDAILAEG 659
           C  K +  K+  L N   P++   +++ +  S ++S   ++ LF+ YKD   E+ IL +G
Sbjct: 78  CDTKRNSFKSLGLLNGSAPTMSDIITTAVQESMEVSHQTLSKLFDVYKDPDDEEMILTDG 137

Query: 660 IENLCNDLNLSPDDFKVLILAWKLNASQMCRFT 758
           IE LCNDLN  PD+F +L+LAW L+ASQMCRFT
Sbjct: 138 IERLCNDLNYQPDEFAILVLAWCLDASQMCRFT 170


>AE013599-1615|AAM68619.1|  334|Drosophila melanogaster CG13322-PB,
           isoform B protein.
          Length = 334

 Score = 80.2 bits (189), Expect = 3e-15
 Identities = 41/93 (44%), Positives = 60/93 (64%), Gaps = 2/93 (2%)
 Frame = +3

Query: 486 CAEKLSL*KTPKLFNPKLPSIPRTMSS-LGSSEKISETKINLLFNQYKD-SIEDAILAEG 659
           C  K +  K+  L N   P++   +++ +  S ++S   ++ LF+ YKD   E+ IL +G
Sbjct: 78  CDTKRNSFKSLGLLNGSAPTMSDIITTAVQESMEVSHQTLSKLFDVYKDPDDEEMILTDG 137

Query: 660 IENLCNDLNLSPDDFKVLILAWKLNASQMCRFT 758
           IE LCNDLN  PD+F +L+LAW L+ASQMCRFT
Sbjct: 138 IERLCNDLNYQPDEFAILVLAWCLDASQMCRFT 170


>AE013599-1614|AAM68618.1|  334|Drosophila melanogaster CG13322-PA,
           isoform A protein.
          Length = 334

 Score = 80.2 bits (189), Expect = 3e-15
 Identities = 41/93 (44%), Positives = 60/93 (64%), Gaps = 2/93 (2%)
 Frame = +3

Query: 486 CAEKLSL*KTPKLFNPKLPSIPRTMSS-LGSSEKISETKINLLFNQYKD-SIEDAILAEG 659
           C  K +  K+  L N   P++   +++ +  S ++S   ++ LF+ YKD   E+ IL +G
Sbjct: 78  CDTKRNSFKSLGLLNGSAPTMSDIITTAVQESMEVSHQTLSKLFDVYKDPDDEEMILTDG 137

Query: 660 IENLCNDLNLSPDDFKVLILAWKLNASQMCRFT 758
           IE LCNDLN  PD+F +L+LAW L+ASQMCRFT
Sbjct: 138 IERLCNDLNYQPDEFAILVLAWCLDASQMCRFT 170


>AY118412-1|AAM48441.1|  288|Drosophila melanogaster RE66446p
           protein.
          Length = 288

 Score = 44.8 bits (101), Expect = 1e-04
 Identities = 21/60 (35%), Positives = 35/60 (58%), Gaps = 1/60 (1%)
 Frame = +3

Query: 582 KISETKINLLFNQYKDSIEDA-ILAEGIENLCNDLNLSPDDFKVLILAWKLNASQMCRFT 758
           ++   +I  LF +Y+D  +   I ++G+ +   DL+L PD   VLI+AWK +A   C F+
Sbjct: 55  ELDRKRIEQLFMRYRDPSDPLKIGSQGVIHFLEDLDLKPDSKLVLIIAWKFHAEVQCEFS 114


>AE014296-2535|AAF49617.2|  288|Drosophila melanogaster CG7427-PA
           protein.
          Length = 288

 Score = 44.8 bits (101), Expect = 1e-04
 Identities = 21/60 (35%), Positives = 35/60 (58%), Gaps = 1/60 (1%)
 Frame = +3

Query: 582 KISETKINLLFNQYKDSIEDA-ILAEGIENLCNDLNLSPDDFKVLILAWKLNASQMCRFT 758
           ++   +I  LF +Y+D  +   I ++G+ +   DL+L PD   VLI+AWK +A   C F+
Sbjct: 55  ELDRKRIEQLFMRYRDPSDPLKIGSQGVIHFLEDLDLKPDSKLVLIIAWKFHAEVQCEFS 114


>BT012470-1|AAS93741.1|  248|Drosophila melanogaster RE34983p
           protein.
          Length = 248

 Score = 42.3 bits (95), Expect = 8e-04
 Identities = 25/85 (29%), Positives = 42/85 (49%), Gaps = 4/85 (4%)
 Frame = +3

Query: 516 PKLFNPKLPSIPRTMSS---LGSSEKISETKINLLFNQYKDSIEDAILA-EGIENLCNDL 683
           PK       SIP   SS   +   +  S+ +    F +Y    E   L  +G+E  C D+
Sbjct: 21  PKRARTSYTSIPTQQSSRRHIRLEDGFSQKRCMAWFQEYTTPDEPETLGPDGMEKFCEDI 80

Query: 684 NLSPDDFKVLILAWKLNASQMCRFT 758
            + P++  +L+LA+K+ A+QM  F+
Sbjct: 81  GVEPENIVMLVLAYKMGATQMGFFS 105


>AE014296-3319|AAN11626.2|  248|Drosophila melanogaster CG6597-PB,
           isoform B protein.
          Length = 248

 Score = 42.3 bits (95), Expect = 8e-04
 Identities = 25/85 (29%), Positives = 42/85 (49%), Gaps = 4/85 (4%)
 Frame = +3

Query: 516 PKLFNPKLPSIPRTMSS---LGSSEKISETKINLLFNQYKDSIEDAILA-EGIENLCNDL 683
           PK       SIP   SS   +   +  S+ +    F +Y    E   L  +G+E  C D+
Sbjct: 21  PKRARTSYTSIPTQQSSRRHIRLEDGFSQKRCMAWFQEYTTPDEPETLGPDGMEKFCEDI 80

Query: 684 NLSPDDFKVLILAWKLNASQMCRFT 758
            + P++  +L+LA+K+ A+QM  F+
Sbjct: 81  GVEPENIVMLVLAYKMGATQMGFFS 105


>AE014296-3318|AAF49037.2|  248|Drosophila melanogaster CG6597-PA,
           isoform A protein.
          Length = 248

 Score = 42.3 bits (95), Expect = 8e-04
 Identities = 25/85 (29%), Positives = 42/85 (49%), Gaps = 4/85 (4%)
 Frame = +3

Query: 516 PKLFNPKLPSIPRTMSS---LGSSEKISETKINLLFNQYKDSIEDAILA-EGIENLCNDL 683
           PK       SIP   SS   +   +  S+ +    F +Y    E   L  +G+E  C D+
Sbjct: 21  PKRARTSYTSIPTQQSSRRHIRLEDGFSQKRCMAWFQEYTTPDEPETLGPDGMEKFCEDI 80

Query: 684 NLSPDDFKVLILAWKLNASQMCRFT 758
            + P++  +L+LA+K+ A+QM  F+
Sbjct: 81  GVEPENIVMLVLAYKMGATQMGFFS 105


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 31,004,572
Number of Sequences: 53049
Number of extensions: 575071
Number of successful extensions: 1207
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 1177
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1207
length of database: 24,988,368
effective HSP length: 84
effective length of database: 20,532,252
effective search space used: 3942192384
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)