Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= br--1494X
         (346 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY293621-1|AAP46162.1|  392|Tribolium castaneum glass protein pr...    22   2.0  
AF217810-1|AAF71998.1|  431|Tribolium castaneum fork head orthol...    22   2.0  
AY887136-1|AAW78361.1|  580|Tribolium castaneum vasa RNA helicas...    21   2.7  
DQ855493-1|ABH88180.1|  127|Tribolium castaneum chemosensory pro...    21   3.6  
AY873913-1|AAW67569.2|  377|Tribolium castaneum chitinase 2 prot...    21   3.6  
DQ855490-1|ABH88177.1|  133|Tribolium castaneum chemosensory pro...    20   6.2  
AM292374-1|CAL23186.2|  659|Tribolium castaneum gustatory recept...    20   6.2  
AM292345-1|CAL23157.2|  384|Tribolium castaneum gustatory recept...    20   6.2  
AF260820-1|AAG02018.1|  139|Tribolium castaneum alpha-esterase l...    20   6.2  

>AY293621-1|AAP46162.1|  392|Tribolium castaneum glass protein
           protein.
          Length = 392

 Score = 21.8 bits (44), Expect = 2.0
 Identities = 11/35 (31%), Positives = 19/35 (54%)
 Frame = -1

Query: 190 PVE*LARATFVQVDLSFCLEVYHHTCSLLKHDHQQ 86
           P E    A++  V +SF      H+ +LL+ D+Q+
Sbjct: 214 PQETPVLASYKSVPMSFSSPRRRHSINLLEEDNQK 248


>AF217810-1|AAF71998.1|  431|Tribolium castaneum fork head
           orthologue protein.
          Length = 431

 Score = 21.8 bits (44), Expect = 2.0
 Identities = 10/31 (32%), Positives = 16/31 (51%)
 Frame = +1

Query: 52  WGYNAIAEDLVLAGDHVSIANKYGDTPLDKT 144
           +GYN ++        H +I N Y ++PL  T
Sbjct: 394 YGYNTLSPLPSSVHSHSTIGNDYYNSPLYHT 424


>AY887136-1|AAW78361.1|  580|Tribolium castaneum vasa RNA helicase
           protein.
          Length = 580

 Score = 21.4 bits (43), Expect = 2.7
 Identities = 10/32 (31%), Positives = 16/32 (50%)
 Frame = +1

Query: 100 VSIANKYGDTPLDKTRGQLVQRLHELATQQGQ 195
           V +A  YG T  +  RG+++   H L    G+
Sbjct: 264 VKVAVIYGGTSTNHQRGRILGGCHILVATPGR 295


>DQ855493-1|ABH88180.1|  127|Tribolium castaneum chemosensory
           protein 7 protein.
          Length = 127

 Score = 21.0 bits (42), Expect = 3.6
 Identities = 7/25 (28%), Positives = 14/25 (56%)
 Frame = -1

Query: 307 CSANSLMLMPLWRESVASGCESCSQ 233
           C++    L     ++++SGC  C+Q
Sbjct: 55  CTSEGRELKKTLPDALSSGCTKCNQ 79


>AY873913-1|AAW67569.2|  377|Tribolium castaneum chitinase 2
           protein.
          Length = 377

 Score = 21.0 bits (42), Expect = 3.6
 Identities = 8/22 (36%), Positives = 14/22 (63%), Gaps = 2/22 (9%)
 Frame = +1

Query: 181 TQQGQDLKKI--QFKDQSWLGY 240
           T+   D +K+  ++KD  W+GY
Sbjct: 307 TRVFDDQQKVPYKYKDDQWIGY 328


>DQ855490-1|ABH88177.1|  133|Tribolium castaneum chemosensory
           protein 4 protein.
          Length = 133

 Score = 20.2 bits (40), Expect = 6.2
 Identities = 7/25 (28%), Positives = 13/25 (52%)
 Frame = -1

Query: 307 CSANSLMLMPLWRESVASGCESCSQ 233
           CS + L L     +++ + C  CS+
Sbjct: 58  CSPDGLELKKNMPDAIETDCSKCSE 82


>AM292374-1|CAL23186.2|  659|Tribolium castaneum gustatory receptor
           candidate 53 protein.
          Length = 659

 Score = 20.2 bits (40), Expect = 6.2
 Identities = 11/44 (25%), Positives = 21/44 (47%)
 Frame = +1

Query: 79  LVLAGDHVSIANKYGDTPLDKTRGQLVQRLHELATQQGQDLKKI 210
           +V+ G    IAN  GDT + +    ++  ++     Q  +L K+
Sbjct: 420 VVIIGTLAIIANLNGDTMIVEAMAYILLAMNSAVCHQTIELVKM 463


>AM292345-1|CAL23157.2|  384|Tribolium castaneum gustatory receptor
           candidate 24 protein.
          Length = 384

 Score = 20.2 bits (40), Expect = 6.2
 Identities = 11/44 (25%), Positives = 21/44 (47%)
 Frame = +1

Query: 79  LVLAGDHVSIANKYGDTPLDKTRGQLVQRLHELATQQGQDLKKI 210
           +V+ G    IAN  GDT + +    ++  ++     Q  +L K+
Sbjct: 145 VVIIGTLAIIANLNGDTMIVEAMAYILLAMNSAVCHQTIELVKM 188


>AF260820-1|AAG02018.1|  139|Tribolium castaneum alpha-esterase like
           protein E1 protein.
          Length = 139

 Score = 20.2 bits (40), Expect = 6.2
 Identities = 8/20 (40%), Positives = 11/20 (55%)
 Frame = +3

Query: 180 YSTGARPEENTI*GPVLAWL 239
           Y+   R + N I  PVL W+
Sbjct: 61  YTKNLRTDTNRITQPVLFWI 80


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 80,242
Number of Sequences: 336
Number of extensions: 1480
Number of successful extensions: 13
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13
length of database: 122,585
effective HSP length: 50
effective length of database: 105,785
effective search space used:  6770240
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 38 (20.3 bits)