Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= br--1493
         (772 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ459779-1|CAD30839.1|  405|Anopheles gambiae clip-domain serine...    27   0.64 
AB097148-2|BAC82628.1| 1077|Anopheles gambiae pol-like protein p...    26   1.5  
AB097148-1|BAC82627.1|  357|Anopheles gambiae gag-like protein p...    25   3.4  
AF269153-1|AAF91398.1|  109|Anopheles gambiae labial homeotic pr...    23   7.9  
AB090820-2|BAC57916.1| 1222|Anopheles gambiae reverse transcript...    23   7.9  

>AJ459779-1|CAD30839.1|  405|Anopheles gambiae clip-domain serine
           protease protein.
          Length = 405

 Score = 27.1 bits (57), Expect = 0.64
 Identities = 18/52 (34%), Positives = 25/52 (48%), Gaps = 1/52 (1%)
 Frame = +2

Query: 599 CLAVGYISDQMEPKCTFDRIVCPALKKDDCQGF-TAPGACCPRCGGALRILY 751
           C+A G I+D +    + +R     +K+  C G  T P  CCPR   A R  Y
Sbjct: 58  CVAYGKIND-VSSLSSIERF--SFIKQIQCNGSDTVPYVCCPRDSDAYREPY 106


>AB097148-2|BAC82628.1| 1077|Anopheles gambiae pol-like protein
            protein.
          Length = 1077

 Score = 25.8 bits (54), Expect = 1.5
 Identities = 15/52 (28%), Positives = 22/52 (42%)
 Frame = +1

Query: 61   VTCACPPPTYACLVSKHPALNTFV*IQQTAIRKPLCRCVTLMAEHMRTPAIL 216
            ++CA  PP  A + S +P L   + IQQ   + P     T       T  +L
Sbjct: 878  ISCAGNPPNIAAVSSTYPCLR--IVIQQLGYQPPSATITTRWIRQTMTEVLL 927


>AB097148-1|BAC82627.1|  357|Anopheles gambiae gag-like protein
           protein.
          Length = 357

 Score = 24.6 bits (51), Expect = 3.4
 Identities = 10/24 (41%), Positives = 16/24 (66%)
 Frame = +1

Query: 43  ESRVRDVTCACPPPTYACLVSKHP 114
           +SR R ++ A P PT+A +  +HP
Sbjct: 91  KSRSRFLSAATPAPTHANVEDQHP 114


>AF269153-1|AAF91398.1|  109|Anopheles gambiae labial homeotic
           protein protein.
          Length = 109

 Score = 23.4 bits (48), Expect = 7.9
 Identities = 11/19 (57%), Positives = 12/19 (63%)
 Frame = -2

Query: 732 PPHLGQQAPGAVNP*QSSF 676
           P H    AP AV+P QSSF
Sbjct: 30  PNHTTVVAPSAVSPHQSSF 48


>AB090820-2|BAC57916.1| 1222|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1222

 Score = 23.4 bits (48), Expect = 7.9
 Identities = 10/16 (62%), Positives = 12/16 (75%)
 Frame = +2

Query: 692 GFTAPGACCPRCGGAL 739
           GF AP A CPRC G++
Sbjct: 943 GF-APSAECPRCPGSV 957


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 880,343
Number of Sequences: 2352
Number of extensions: 19968
Number of successful extensions: 74
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 73
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 74
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 80249979
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)