Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= br--1491
         (792 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_UPI0000DB7AA3 Cluster: PREDICTED: similar to CG16953-PA...    98   2e-19
UniRef50_UPI00015B4274 Cluster: PREDICTED: similar to GA14233-PA...    98   3e-19
UniRef50_UPI0000D55AC5 Cluster: PREDICTED: similar to CG16953-PA...    97   4e-19
UniRef50_Q29BR6 Cluster: GA14233-PA; n=1; Drosophila pseudoobscu...    91   3e-17
UniRef50_Q17FJ9 Cluster: Putative uncharacterized protein; n=1; ...    86   8e-16
UniRef50_Q8T0R9 Cluster: GH12359p; n=2; Drosophila melanogaster|...    85   1e-15
UniRef50_Q7PYC8 Cluster: ENSANGP00000020146; n=1; Anopheles gamb...    84   4e-15
UniRef50_Q058G0 Cluster: DNA polymerase III, b subunit; n=1; Buc...    38   0.22 
UniRef50_A3K6V9 Cluster: Putative uncharacterized protein; n=1; ...    35   2.7  
UniRef50_UPI0000E809A4 Cluster: PREDICTED: hypothetical protein;...    34   4.7  
UniRef50_Q55CZ1 Cluster: Putative transmembrane protein; n=1; Di...    34   4.7  
UniRef50_P70975 Cluster: Putative uncharacterized protein orf9; ...    33   8.2  

>UniRef50_UPI0000DB7AA3 Cluster: PREDICTED: similar to CG16953-PA
           isoform 1; n=1; Apis mellifera|Rep: PREDICTED: similar
           to CG16953-PA isoform 1 - Apis mellifera
          Length = 422

 Score = 98.3 bits (234), Expect = 2e-19
 Identities = 48/80 (60%), Positives = 59/80 (73%), Gaps = 3/80 (3%)
 Frame = +1

Query: 13  TVTIYRAAVPTQLSVIVVPVFFCLVAVILVVFGIAYY-QHRSRYTIEVADFDFGQENP-- 183
           T+ IY+     QLSVIVVPV   L AV+L++FGIAYY Q+R+++TIEVADFDFGQ NP  
Sbjct: 326 TINIYKVTTKPQLSVIVVPVSCSLAAVVLIIFGIAYYIQNRAKFTIEVADFDFGQNNPEM 385

Query: 184 EYKTFSERLHDSFRDAFHFG 243
           EYKTF+ERL DS  +    G
Sbjct: 386 EYKTFTERLRDSINNTIRSG 405


>UniRef50_UPI00015B4274 Cluster: PREDICTED: similar to GA14233-PA;
           n=1; Nasonia vitripennis|Rep: PREDICTED: similar to
           GA14233-PA - Nasonia vitripennis
          Length = 413

 Score = 97.9 bits (233), Expect = 3e-19
 Identities = 51/84 (60%), Positives = 62/84 (73%), Gaps = 3/84 (3%)
 Frame = +1

Query: 16  VTIYRAAVPTQLSVIVVPVFFCLVAVILVVFGIAYY-QHRSRYTIEVADFDFGQE--NPE 186
           V IY+     QLSVIVVPV   LVA++L++FGIAYY Q+RSR+T+EVADFDFGQ   + E
Sbjct: 316 VNIYKLMPKPQLSVIVVPVSCSLVAIVLIIFGIAYYVQNRSRFTVEVADFDFGQSTADME 375

Query: 187 YKTFSERLHDSFRDAFHFGRGDER 258
           YKTF+ERL DSF +A   G   ER
Sbjct: 376 YKTFTERLRDSFNNAVRPGSQHER 399


>UniRef50_UPI0000D55AC5 Cluster: PREDICTED: similar to CG16953-PA;
           n=1; Tribolium castaneum|Rep: PREDICTED: similar to
           CG16953-PA - Tribolium castaneum
          Length = 395

 Score = 97.1 bits (231), Expect = 4e-19
 Identities = 48/77 (62%), Positives = 60/77 (77%), Gaps = 3/77 (3%)
 Frame = +1

Query: 13  TVTIYRAAVPTQLSVIVVPVFFCLVAVILVVFGIAYY-QHRSRYTIEVADFDFGQ--ENP 183
           TVT+Y+     QLSVIVVPV F LVAV+L+VFG+AYY Q+RSR+ +EVADF+FGQ   + 
Sbjct: 293 TVTVYKVKKQAQLSVIVVPVAFSLVAVVLIVFGVAYYLQNRSRFVVEVADFNFGQNYSDM 352

Query: 184 EYKTFSERLHDSFRDAF 234
           EYKTF ERL D+  +AF
Sbjct: 353 EYKTFKERLRDAIANAF 369


>UniRef50_Q29BR6 Cluster: GA14233-PA; n=1; Drosophila
           pseudoobscura|Rep: GA14233-PA - Drosophila pseudoobscura
           (Fruit fly)
          Length = 496

 Score = 91.1 bits (216), Expect = 3e-17
 Identities = 50/97 (51%), Positives = 67/97 (69%), Gaps = 4/97 (4%)
 Frame = +1

Query: 1   VSRETVTIYRAAVPTQLSVIVVPVFFCLVAVILVVFGIAYY-QHRSRYTIEVADFDFGQE 177
           V++ T+ +Y A   +QLSV+VVPV   L+AVILVVFG+AYY Q R+R+T+EVADF+FG  
Sbjct: 370 VNQVTINMYEAQKQSQLSVVVVPVTCTLMAVILVVFGVAYYIQSRNRFTVEVADFNFGDT 429

Query: 178 ---NPEYKTFSERLHDSFRDAFHFGRGDERSRSHRTL 279
              + EYKTFS+RL DS RD + +      S+S   L
Sbjct: 430 QSVDMEYKTFSQRLIDSIRDVWAWPGPRRHSQSSTDL 466


>UniRef50_Q17FJ9 Cluster: Putative uncharacterized protein; n=1;
           Aedes aegypti|Rep: Putative uncharacterized protein -
           Aedes aegypti (Yellowfever mosquito)
          Length = 541

 Score = 86.2 bits (204), Expect = 8e-16
 Identities = 50/98 (51%), Positives = 62/98 (63%), Gaps = 8/98 (8%)
 Frame = +1

Query: 22  IYRAAVPTQLSVIVVPVFFCLVAVILVVFGIAYY-QHRSRYTIEVADFDFG-----QENP 183
           IY     +QLSVIVVP+ FCL+AVILVVFG+AYY Q+R R+ +EVADF+FG      ++ 
Sbjct: 430 IYENQPKSQLSVIVVPIGFCLLAVILVVFGVAYYIQNRERFIVEVADFNFGDTSSLDDDM 489

Query: 184 EYKTFSERLHDSFRDAFHFGRG--DERSRSHRTLDMIP 291
           EYKTF +RL DS R+     R        SH   DM P
Sbjct: 490 EYKTFRQRLVDSLRNTIQLPRFRLGSSGASHDGDDMSP 527


>UniRef50_Q8T0R9 Cluster: GH12359p; n=2; Drosophila
           melanogaster|Rep: GH12359p - Drosophila melanogaster
           (Fruit fly)
          Length = 573

 Score = 85.4 bits (202), Expect = 1e-15
 Identities = 48/100 (48%), Positives = 68/100 (68%), Gaps = 4/100 (4%)
 Frame = +1

Query: 1   VSRETVTIYRAAVPTQLSVIVVPVFFCLVAVILVVFGIAYY-QHRSRYTIEVADFDFGQE 177
           +++ T+ +Y A   +QLSV+VVPV   LVAVILVVFG+AYY Q  +R+ +EVADF+FG  
Sbjct: 448 LNQVTINMYEAQRQSQLSVVVVPVSCTLVAVILVVFGVAYYIQRGNRFNVEVADFNFGDT 507

Query: 178 ---NPEYKTFSERLHDSFRDAFHFGRGDERSRSHRTLDMI 288
              + EYKTF +RL DS RDA  +    +R  S  ++D++
Sbjct: 508 QSVDMEYKTFPQRLIDSIRDACTW--PGQRRHSQSSVDLM 545


>UniRef50_Q7PYC8 Cluster: ENSANGP00000020146; n=1; Anopheles gambiae
           str. PEST|Rep: ENSANGP00000020146 - Anopheles gambiae
           str. PEST
          Length = 388

 Score = 83.8 bits (198), Expect = 4e-15
 Identities = 46/99 (46%), Positives = 65/99 (65%), Gaps = 7/99 (7%)
 Frame = +1

Query: 16  VTIYRAAVPTQLSVIVVPVFFCLVAVILVVFGIAYY-QHRSRYTIEVADFDFG-----QE 177
           +  Y     +QLSVI+VP+ F L+AV++VVFG+AYY Q+R R+ +EVADF+FG      +
Sbjct: 274 IQFYENQPKSQLSVIIVPIAFGLLAVLMVVFGMAYYIQNRDRFIVEVADFNFGDTSSLDD 333

Query: 178 NPEYKTFSERLHDSFRDAFHFGRGD-ERSRSHRTLDMIP 291
           + EYKTF +RL DS RD+    R +  RS +H   D+ P
Sbjct: 334 DMEYKTFHQRLVDSLRDSVRIPRFNFRRSSAHDVDDISP 372


>UniRef50_Q058G0 Cluster: DNA polymerase III, b subunit; n=1;
           Buchnera aphidicola str. Cc (Cinara cedri)|Rep: DNA
           polymerase III, b subunit - Buchnera aphidicola subsp.
           Cinara cedri
          Length = 368

 Score = 38.3 bits (85), Expect = 0.22
 Identities = 20/62 (32%), Positives = 32/62 (51%), Gaps = 3/62 (4%)
 Frame = +3

Query: 585 LFWGNNCISTCQAKFMNVPFFFT-DLSLVFR--QAKGRICVIKKLFELKTSYCNGFSLFN 755
           + + + C++    K +N+    + D  L F+    K RIC++  LFEL T  C  F +FN
Sbjct: 63  ILYKSGCVAISGKKILNICRNISKDAILHFKIINKKMRICILNSLFELNTMICTNFPIFN 122

Query: 756 AF 761
            F
Sbjct: 123 DF 124


>UniRef50_A3K6V9 Cluster: Putative uncharacterized protein; n=1;
           Sagittula stellata E-37|Rep: Putative uncharacterized
           protein - Sagittula stellata E-37
          Length = 215

 Score = 34.7 bits (76), Expect = 2.7
 Identities = 15/40 (37%), Positives = 21/40 (52%)
 Frame = +1

Query: 151 VADFDFGQENPEYKTFSERLHDSFRDAFHFGRGDERSRSH 270
           V D DF + +P +    E LHD+ RD FH  + D    S+
Sbjct: 156 VGDLDFSETDPAFLIIPEDLHDAARDFFHSAKVDHVGPSY 195


>UniRef50_UPI0000E809A4 Cluster: PREDICTED: hypothetical protein;
           n=1; Gallus gallus|Rep: PREDICTED: hypothetical protein
           - Gallus gallus
          Length = 404

 Score = 33.9 bits (74), Expect = 4.7
 Identities = 16/30 (53%), Positives = 20/30 (66%)
 Frame = -2

Query: 377 SIPRSVKALISRRQPHFFNLTSKRQGLRHG 288
           S+P   +A + RRQPH  NL SKR+G R G
Sbjct: 213 SLPLRPRAALPRRQPHDTNLPSKRRGGRGG 242


>UniRef50_Q55CZ1 Cluster: Putative transmembrane protein; n=1;
            Dictyostelium discoideum AX4|Rep: Putative transmembrane
            protein - Dictyostelium discoideum AX4
          Length = 1637

 Score = 33.9 bits (74), Expect = 4.7
 Identities = 14/38 (36%), Positives = 25/38 (65%), Gaps = 3/38 (7%)
 Frame = +1

Query: 58   IVVPV---FFCLVAVILVVFGIAYYQHRSRYTIEVADF 162
            I+VP+      L+++++V FG  YY+H+ R  +E+A F
Sbjct: 897  IIVPICVTVLVLLSILIVFFGARYYKHKKRRRLEIAVF 934


>UniRef50_P70975 Cluster: Putative uncharacterized protein orf9;
           n=1; Bacillus subtilis|Rep: Putative uncharacterized
           protein orf9 - Bacillus subtilis
          Length = 74

 Score = 33.1 bits (72), Expect = 8.2
 Identities = 14/33 (42%), Positives = 20/33 (60%)
 Frame = +3

Query: 675 QAKGRICVIKKLFELKTSYCNGFSLFNAFAIGS 773
           Q  GR+  + KLF  K S CN    F++++IGS
Sbjct: 37  QLNGRLTGLSKLFVYKRSLCNNHGRFHSYSIGS 69


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 744,064,020
Number of Sequences: 1657284
Number of extensions: 14624592
Number of successful extensions: 40610
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 38389
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 40468
length of database: 575,637,011
effective HSP length: 99
effective length of database: 411,565,895
effective search space used: 67496806780
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)