BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= br--1488
(845 letters)
Database: mosquito
2352 sequences; 563,979 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
EF426178-1|ABO26421.1| 155|Anopheles gambiae unknown protein. 25 2.2
EF426177-1|ABO26420.1| 155|Anopheles gambiae unknown protein. 25 2.2
EF426176-1|ABO26419.1| 155|Anopheles gambiae unknown protein. 25 2.2
EF426175-1|ABO26418.1| 155|Anopheles gambiae unknown protein. 25 2.2
EF426174-1|ABO26417.1| 155|Anopheles gambiae unknown protein. 25 2.2
EF426173-1|ABO26416.1| 155|Anopheles gambiae unknown protein. 25 2.2
EF426172-1|ABO26415.1| 155|Anopheles gambiae unknown protein. 25 2.2
EF426171-1|ABO26414.1| 155|Anopheles gambiae unknown protein. 25 2.2
EF426170-1|ABO26413.1| 155|Anopheles gambiae unknown protein. 25 2.2
EF426169-1|ABO26412.1| 155|Anopheles gambiae unknown protein. 25 2.2
EF426168-1|ABO26411.1| 155|Anopheles gambiae unknown protein. 25 2.2
EF426167-1|ABO26410.1| 155|Anopheles gambiae unknown protein. 25 2.2
EF426164-1|ABO26407.1| 155|Anopheles gambiae unknown protein. 25 2.2
EF426162-1|ABO26405.1| 155|Anopheles gambiae unknown protein. 25 2.2
EF426161-1|ABO26404.1| 155|Anopheles gambiae unknown protein. 25 2.2
AY027891-1|AAK15783.1| 801|Anopheles gambiae collagen IV alpha ... 25 2.2
EF426166-1|ABO26409.1| 155|Anopheles gambiae unknown protein. 25 2.9
EF426165-1|ABO26408.1| 155|Anopheles gambiae unknown protein. 25 2.9
EF426163-1|ABO26406.1| 155|Anopheles gambiae unknown protein. 25 3.8
AJ441131-2|CAD29631.1| 208|Anopheles gambiae hypothetical prote... 25 3.8
AJ439398-1|CAD28124.1| 208|Anopheles gambiae hypothetical prote... 25 3.8
AJ439061-1|CAD27770.1| 89|Anopheles gambiae hypothetical prote... 25 3.8
Z71480-1|CAA96104.1| 209|Anopheles gambiae GSTD2 protein protein. 24 6.7
AJ439353-6|CAD27928.1| 695|Anopheles gambiae putative G-protein... 23 8.8
>EF426178-1|ABO26421.1| 155|Anopheles gambiae unknown protein.
Length = 155
Score = 25.4 bits (53), Expect = 2.2
Identities = 10/31 (32%), Positives = 18/31 (58%)
Frame = +1
Query: 67 FNFYSMCMAVKLEIPSVVTLMEFRLDSAEYC 159
FN SMC ++ +PS + +++ L + E C
Sbjct: 100 FNDKSMCSLIQSALPSEIRIVDCDLCTTELC 130
>EF426177-1|ABO26420.1| 155|Anopheles gambiae unknown protein.
Length = 155
Score = 25.4 bits (53), Expect = 2.2
Identities = 10/31 (32%), Positives = 18/31 (58%)
Frame = +1
Query: 67 FNFYSMCMAVKLEIPSVVTLMEFRLDSAEYC 159
FN SMC ++ +PS + +++ L + E C
Sbjct: 100 FNDKSMCSLIQSALPSEIRIVDCDLCTTELC 130
>EF426176-1|ABO26419.1| 155|Anopheles gambiae unknown protein.
Length = 155
Score = 25.4 bits (53), Expect = 2.2
Identities = 10/31 (32%), Positives = 18/31 (58%)
Frame = +1
Query: 67 FNFYSMCMAVKLEIPSVVTLMEFRLDSAEYC 159
FN SMC ++ +PS + +++ L + E C
Sbjct: 100 FNDKSMCSLIQSALPSEIRIVDCDLCTTELC 130
>EF426175-1|ABO26418.1| 155|Anopheles gambiae unknown protein.
Length = 155
Score = 25.4 bits (53), Expect = 2.2
Identities = 10/31 (32%), Positives = 18/31 (58%)
Frame = +1
Query: 67 FNFYSMCMAVKLEIPSVVTLMEFRLDSAEYC 159
FN SMC ++ +PS + +++ L + E C
Sbjct: 100 FNDKSMCSLIQSALPSEIRIVDCDLCTTELC 130
>EF426174-1|ABO26417.1| 155|Anopheles gambiae unknown protein.
Length = 155
Score = 25.4 bits (53), Expect = 2.2
Identities = 10/31 (32%), Positives = 18/31 (58%)
Frame = +1
Query: 67 FNFYSMCMAVKLEIPSVVTLMEFRLDSAEYC 159
FN SMC ++ +PS + +++ L + E C
Sbjct: 100 FNDKSMCSLIQSALPSEIRIVDCDLCTTELC 130
>EF426173-1|ABO26416.1| 155|Anopheles gambiae unknown protein.
Length = 155
Score = 25.4 bits (53), Expect = 2.2
Identities = 10/31 (32%), Positives = 18/31 (58%)
Frame = +1
Query: 67 FNFYSMCMAVKLEIPSVVTLMEFRLDSAEYC 159
FN SMC ++ +PS + +++ L + E C
Sbjct: 100 FNDKSMCSLIQSALPSEIRIVDCDLCTTELC 130
>EF426172-1|ABO26415.1| 155|Anopheles gambiae unknown protein.
Length = 155
Score = 25.4 bits (53), Expect = 2.2
Identities = 10/31 (32%), Positives = 18/31 (58%)
Frame = +1
Query: 67 FNFYSMCMAVKLEIPSVVTLMEFRLDSAEYC 159
FN SMC ++ +PS + +++ L + E C
Sbjct: 100 FNDKSMCSLIQSALPSEIRIVDCDLCTTELC 130
>EF426171-1|ABO26414.1| 155|Anopheles gambiae unknown protein.
Length = 155
Score = 25.4 bits (53), Expect = 2.2
Identities = 10/31 (32%), Positives = 18/31 (58%)
Frame = +1
Query: 67 FNFYSMCMAVKLEIPSVVTLMEFRLDSAEYC 159
FN SMC ++ +PS + +++ L + E C
Sbjct: 100 FNDKSMCSLIQSALPSEIRIVDCDLCTTELC 130
>EF426170-1|ABO26413.1| 155|Anopheles gambiae unknown protein.
Length = 155
Score = 25.4 bits (53), Expect = 2.2
Identities = 10/31 (32%), Positives = 18/31 (58%)
Frame = +1
Query: 67 FNFYSMCMAVKLEIPSVVTLMEFRLDSAEYC 159
FN SMC ++ +PS + +++ L + E C
Sbjct: 100 FNDKSMCSLIQSALPSEIRIVDCDLCTTELC 130
>EF426169-1|ABO26412.1| 155|Anopheles gambiae unknown protein.
Length = 155
Score = 25.4 bits (53), Expect = 2.2
Identities = 10/31 (32%), Positives = 18/31 (58%)
Frame = +1
Query: 67 FNFYSMCMAVKLEIPSVVTLMEFRLDSAEYC 159
FN SMC ++ +PS + +++ L + E C
Sbjct: 100 FNDKSMCSLIQSALPSEIRIVDCDLCTTELC 130
>EF426168-1|ABO26411.1| 155|Anopheles gambiae unknown protein.
Length = 155
Score = 25.4 bits (53), Expect = 2.2
Identities = 10/31 (32%), Positives = 18/31 (58%)
Frame = +1
Query: 67 FNFYSMCMAVKLEIPSVVTLMEFRLDSAEYC 159
FN SMC ++ +PS + +++ L + E C
Sbjct: 100 FNDKSMCSLIQSALPSEIRIVDCDLCTTELC 130
>EF426167-1|ABO26410.1| 155|Anopheles gambiae unknown protein.
Length = 155
Score = 25.4 bits (53), Expect = 2.2
Identities = 10/31 (32%), Positives = 18/31 (58%)
Frame = +1
Query: 67 FNFYSMCMAVKLEIPSVVTLMEFRLDSAEYC 159
FN SMC ++ +PS + +++ L + E C
Sbjct: 100 FNDKSMCSLIQSALPSEIRIVDCDLCTTELC 130
>EF426164-1|ABO26407.1| 155|Anopheles gambiae unknown protein.
Length = 155
Score = 25.4 bits (53), Expect = 2.2
Identities = 10/31 (32%), Positives = 18/31 (58%)
Frame = +1
Query: 67 FNFYSMCMAVKLEIPSVVTLMEFRLDSAEYC 159
FN SMC ++ +PS + +++ L + E C
Sbjct: 100 FNDKSMCSLIQSALPSEIRIVDCDLCTTELC 130
>EF426162-1|ABO26405.1| 155|Anopheles gambiae unknown protein.
Length = 155
Score = 25.4 bits (53), Expect = 2.2
Identities = 10/31 (32%), Positives = 18/31 (58%)
Frame = +1
Query: 67 FNFYSMCMAVKLEIPSVVTLMEFRLDSAEYC 159
FN SMC ++ +PS + +++ L + E C
Sbjct: 100 FNDKSMCSLIQSALPSEIRIVDCDLCTTELC 130
>EF426161-1|ABO26404.1| 155|Anopheles gambiae unknown protein.
Length = 155
Score = 25.4 bits (53), Expect = 2.2
Identities = 10/31 (32%), Positives = 18/31 (58%)
Frame = +1
Query: 67 FNFYSMCMAVKLEIPSVVTLMEFRLDSAEYC 159
FN SMC ++ +PS + +++ L + E C
Sbjct: 100 FNDKSMCSLIQSALPSEIRIVDCDLCTTELC 130
>AY027891-1|AAK15783.1| 801|Anopheles gambiae collagen IV alpha 1
chain precursor protein.
Length = 801
Score = 25.4 bits (53), Expect = 2.2
Identities = 12/31 (38%), Positives = 16/31 (51%), Gaps = 1/31 (3%)
Frame = -2
Query: 163 PGST-PRCPSGTPSMSPQKGSPASQPYTLNR 74
PG+ PR +G P +KG PA P N+
Sbjct: 195 PGNPGPRGYAGIPGTKGEKGEPARHPENYNK 225
>EF426166-1|ABO26409.1| 155|Anopheles gambiae unknown protein.
Length = 155
Score = 25.0 bits (52), Expect = 2.9
Identities = 10/31 (32%), Positives = 18/31 (58%)
Frame = +1
Query: 67 FNFYSMCMAVKLEIPSVVTLMEFRLDSAEYC 159
FN SMC ++ +PS + +++ L + E C
Sbjct: 100 FNDKSMCSLIQNALPSEIRIVDCDLCTTELC 130
>EF426165-1|ABO26408.1| 155|Anopheles gambiae unknown protein.
Length = 155
Score = 25.0 bits (52), Expect = 2.9
Identities = 10/31 (32%), Positives = 18/31 (58%)
Frame = +1
Query: 67 FNFYSMCMAVKLEIPSVVTLMEFRLDSAEYC 159
FN SMC ++ +PS + +++ L + E C
Sbjct: 100 FNDKSMCSLIQNALPSEIRIVDCDLCTTELC 130
>EF426163-1|ABO26406.1| 155|Anopheles gambiae unknown protein.
Length = 155
Score = 24.6 bits (51), Expect = 3.8
Identities = 10/31 (32%), Positives = 18/31 (58%)
Frame = +1
Query: 67 FNFYSMCMAVKLEIPSVVTLMEFRLDSAEYC 159
FN SMC ++ +PS + +++ L + E C
Sbjct: 100 FNDKSMCSLMQSALPSEIRIVDCDLCTTELC 130
>AJ441131-2|CAD29631.1| 208|Anopheles gambiae hypothetical protein
protein.
Length = 208
Score = 24.6 bits (51), Expect = 3.8
Identities = 10/19 (52%), Positives = 13/19 (68%)
Frame = -1
Query: 845 SGAVS*LGSHTRTTVHTLC 789
SG V GSH +++VH LC
Sbjct: 31 SGFVRRQGSHAKSSVHKLC 49
>AJ439398-1|CAD28124.1| 208|Anopheles gambiae hypothetical protein
protein.
Length = 208
Score = 24.6 bits (51), Expect = 3.8
Identities = 10/19 (52%), Positives = 13/19 (68%)
Frame = -1
Query: 845 SGAVS*LGSHTRTTVHTLC 789
SG V GSH +++VH LC
Sbjct: 31 SGFVRRQGSHAKSSVHKLC 49
>AJ439061-1|CAD27770.1| 89|Anopheles gambiae hypothetical protein
protein.
Length = 89
Score = 24.6 bits (51), Expect = 3.8
Identities = 10/19 (52%), Positives = 13/19 (68%)
Frame = -1
Query: 845 SGAVS*LGSHTRTTVHTLC 789
SG V GSH +++VH LC
Sbjct: 31 SGFVRRQGSHAKSSVHKLC 49
>Z71480-1|CAA96104.1| 209|Anopheles gambiae GSTD2 protein protein.
Length = 209
Score = 23.8 bits (49), Expect = 6.7
Identities = 9/21 (42%), Positives = 15/21 (71%)
Frame = -2
Query: 220 DGALLLSPSRKHFLFICVEPG 158
DG+L+LS SR +++C + G
Sbjct: 58 DGSLVLSESRAALIYLCDQYG 78
>AJ439353-6|CAD27928.1| 695|Anopheles gambiae putative G-protein
coupled receptor protein.
Length = 695
Score = 23.4 bits (48), Expect = 8.8
Identities = 7/11 (63%), Positives = 11/11 (100%)
Frame = +3
Query: 393 ICFHILNFCLI 425
ICF+ILN+C++
Sbjct: 541 ICFNILNWCML 551
Database: mosquito
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 563,979
Number of sequences in database: 2352
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 972,865
Number of Sequences: 2352
Number of extensions: 21904
Number of successful extensions: 62
Number of sequences better than 10.0: 24
Number of HSP's better than 10.0 without gapping: 60
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 62
length of database: 563,979
effective HSP length: 64
effective length of database: 413,451
effective search space used: 89718867
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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