Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= br--1485
         (688 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY600513-1|AAT11861.1|  314|Tribolium castaneum spalt-like prote...    23   1.8  
AY531876-2|AAT08871.1|  340|Tribolium castaneum tyrosine recombi...    22   4.1  
AY362544-1|AAQ63456.1|  268|Tribolium castaneum chitin synthase ...    22   5.4  
AY362543-1|AAQ63455.1|  677|Tribolium castaneum chitin synthase ...    22   5.4  
AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase ...    22   5.4  
AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase ...    22   5.4  
AM292382-1|CAL23194.2|  670|Tribolium castaneum gustatory recept...    22   5.4  
AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like pr...    21   7.2  
DQ659248-1|ABG47446.1|  496|Tribolium castaneum chitinase 8 prot...    21   9.5  
AM292375-1|CAL23187.2|  311|Tribolium castaneum gustatory recept...    21   9.5  
AM292336-1|CAL23148.2|  455|Tribolium castaneum gustatory recept...    21   9.5  

>AY600513-1|AAT11861.1|  314|Tribolium castaneum spalt-like protein
           protein.
          Length = 314

 Score = 23.4 bits (48), Expect = 1.8
 Identities = 11/32 (34%), Positives = 16/32 (50%)
 Frame = -1

Query: 355 TPEGSHHTQTTLRGHSIVHVCHRKFSKELQVQ 260
           T  G H  +  +R      VCH+KF+  L +Q
Sbjct: 180 THMGVHRAKPPMRVLHQCPVCHKKFTNALVLQ 211


>AY531876-2|AAT08871.1|  340|Tribolium castaneum tyrosine
           recombinase protein.
          Length = 340

 Score = 22.2 bits (45), Expect = 4.1
 Identities = 8/16 (50%), Positives = 10/16 (62%)
 Frame = -2

Query: 525 FCTHRKPINPIDAGTL 478
           F THRKP +P    +L
Sbjct: 251 FLTHRKPFHPASTQSL 266


>AY362544-1|AAQ63456.1|  268|Tribolium castaneum chitin synthase
           protein.
          Length = 268

 Score = 21.8 bits (44), Expect = 5.4
 Identities = 8/18 (44%), Positives = 12/18 (66%)
 Frame = -3

Query: 602 LVNYRRNGKTVEAVCERL 549
           LV+Y +  KT+ A C R+
Sbjct: 174 LVDYMKKNKTLGAACGRI 191


>AY362543-1|AAQ63455.1|  677|Tribolium castaneum chitin synthase
           protein.
          Length = 677

 Score = 21.8 bits (44), Expect = 5.4
 Identities = 8/18 (44%), Positives = 12/18 (66%)
 Frame = -3

Query: 602 LVNYRRNGKTVEAVCERL 549
           LV+Y +  KT+ A C R+
Sbjct: 488 LVDYMKKNKTLGAACGRI 505


>AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase
           protein.
          Length = 1464

 Score = 21.8 bits (44), Expect = 5.4
 Identities = 8/18 (44%), Positives = 12/18 (66%)
 Frame = -3

Query: 602 LVNYRRNGKTVEAVCERL 549
           LV+Y +  KT+ A C R+
Sbjct: 721 LVDYMKKNKTLGAACGRI 738


>AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase
           CHS2 protein.
          Length = 1464

 Score = 21.8 bits (44), Expect = 5.4
 Identities = 8/18 (44%), Positives = 12/18 (66%)
 Frame = -3

Query: 602 LVNYRRNGKTVEAVCERL 549
           LV+Y +  KT+ A C R+
Sbjct: 721 LVDYMKKNKTLGAACGRI 738


>AM292382-1|CAL23194.2|  670|Tribolium castaneum gustatory receptor
           candidate 61 protein.
          Length = 670

 Score = 21.8 bits (44), Expect = 5.4
 Identities = 7/10 (70%), Positives = 9/10 (90%)
 Frame = +1

Query: 481 CASINRIYGF 510
           C S+NRI+GF
Sbjct: 527 CDSVNRIFGF 536


>AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like
           protein protein.
          Length = 1156

 Score = 21.4 bits (43), Expect = 7.2
 Identities = 7/20 (35%), Positives = 13/20 (65%)
 Frame = -1

Query: 376 LRGRDSWTPEGSHHTQTTLR 317
           +RG+D W  +G+  T+  L+
Sbjct: 461 VRGQDVWLGKGAEQTRQILK 480


>DQ659248-1|ABG47446.1|  496|Tribolium castaneum chitinase 8
           protein.
          Length = 496

 Score = 21.0 bits (42), Expect = 9.5
 Identities = 7/14 (50%), Positives = 9/14 (64%)
 Frame = +3

Query: 378 LCGPWQAVVGNNMP 419
           L G W++V G N P
Sbjct: 213 LHGSWESVTGQNAP 226


>AM292375-1|CAL23187.2|  311|Tribolium castaneum gustatory receptor
           candidate 54 protein.
          Length = 311

 Score = 21.0 bits (42), Expect = 9.5
 Identities = 9/26 (34%), Positives = 15/26 (57%)
 Frame = -3

Query: 104 LPSDILYVYEIWLNRIGKRREMFKIF 27
           +PS ++Y    WL++I    E+  IF
Sbjct: 98  VPSGVVYKIGYWLHQICHICELHTIF 123


>AM292336-1|CAL23148.2|  455|Tribolium castaneum gustatory receptor
           candidate 15 protein.
          Length = 455

 Score = 21.0 bits (42), Expect = 9.5
 Identities = 8/15 (53%), Positives = 11/15 (73%)
 Frame = -3

Query: 170 SHLVLLVIFLLRYRC 126
           +HL+ LVIF+L   C
Sbjct: 121 AHLLFLVIFVLNIWC 135


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 167,938
Number of Sequences: 336
Number of extensions: 3672
Number of successful extensions: 12
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 18010165
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)