Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= br--1478X
(512 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_A2F043 Cluster: Putative uncharacterized protein; n=1; ... 34 1.7
UniRef50_Q5DBY9 Cluster: SJCHGC09411 protein; n=1; Schistosoma j... 34 2.2
UniRef50_O88291 Cluster: Zinc finger protein 326; n=27; Tetrapod... 34 2.2
UniRef50_Q5AWD3 Cluster: Putative uncharacterized protein; n=1; ... 33 2.9
UniRef50_UPI00015B4E13 Cluster: PREDICTED: similar to conserved ... 33 3.8
UniRef50_UPI0000D574D0 Cluster: PREDICTED: similar to CG6143-PB,... 33 3.8
UniRef50_Q5BKZ1 Cluster: Zinc finger protein 326; n=7; Amniota|R... 33 3.8
UniRef50_Q5DFM7 Cluster: SJCHGC09123 protein; n=1; Schistosoma j... 33 5.0
UniRef50_UPI00015B62F8 Cluster: PREDICTED: hypothetical protein;... 32 6.7
UniRef50_Q4N1W8 Cluster: Putative uncharacterized protein; n=2; ... 32 6.7
UniRef50_Q9C0A1 Cluster: Zinc finger homeobox protein 2; n=20; T... 32 6.7
UniRef50_A0BQD0 Cluster: Chromosome undetermined scaffold_120, w... 32 8.8
UniRef50_Q5U3C1 Cluster: ZFHX4 protein; n=11; Tetrapoda|Rep: ZFH... 32 8.8
UniRef50_Q86UP3 Cluster: Zinc finger homeobox protein 4; n=18; E... 32 8.8
>UniRef50_A2F043 Cluster: Putative uncharacterized protein; n=1;
Trichomonas vaginalis G3|Rep: Putative uncharacterized
protein - Trichomonas vaginalis G3
Length = 521
Score = 34.3 bits (75), Expect = 1.7
Identities = 16/59 (27%), Positives = 33/59 (55%)
Frame = -3
Query: 309 SSGRTSLMNSFSTESITIMGFPSSQLRVSQ*PCGRQFDQTLIRTRKLDISKCPCSLPNK 133
+ +S++N F+T S+T G S + ++ CG F +T + ++I+KC C + ++
Sbjct: 251 NDSNSSMLNIFNTTSVTFDGVKSLKSKI----CGFHFIETSSKHNNINITKCICRIDDQ 305
>UniRef50_Q5DBY9 Cluster: SJCHGC09411 protein; n=1; Schistosoma
japonicum|Rep: SJCHGC09411 protein - Schistosoma
japonicum (Blood fluke)
Length = 359
Score = 33.9 bits (74), Expect = 2.2
Identities = 20/73 (27%), Positives = 38/73 (52%)
Frame = +2
Query: 263 IDSVENEFIREVRPEEYHCGFCNIIIPGLDAIVEHLKTLVHKKAKNSASWRLQRHLLRKR 442
ID +E+ +RE + Y C CN + G+D + HL ++ H++ S R+ + ++
Sbjct: 103 IDELESTPLREKK--FYRCSLCNTNLIGVDNLENHLHSVEHQEQYKS---RVDPQWIIQK 157
Query: 443 LSEFSLND*IMEI 481
+ S +D I +I
Sbjct: 158 VESLSFSDVIFDI 170
>UniRef50_O88291 Cluster: Zinc finger protein 326; n=27;
Tetrapoda|Rep: Zinc finger protein 326 - Mus musculus
(Mouse)
Length = 580
Score = 33.9 bits (74), Expect = 2.2
Identities = 15/44 (34%), Positives = 26/44 (59%), Gaps = 1/44 (2%)
Frame = +2
Query: 296 VRPEEYHCGFCNIIIPGLDAIVE-HLKTLVHKKAKNSASWRLQR 424
++ E HC C++ IP L + V+ HLK+ H K K + +++R
Sbjct: 400 MKVETVHCSACSVYIPALHSSVQLHLKSPDHSKGKQAYKEQIKR 443
>UniRef50_Q5AWD3 Cluster: Putative uncharacterized protein; n=1;
Emericella nidulans|Rep: Putative uncharacterized
protein - Emericella nidulans (Aspergillus nidulans)
Length = 852
Score = 33.5 bits (73), Expect = 2.9
Identities = 22/65 (33%), Positives = 33/65 (50%), Gaps = 3/65 (4%)
Frame = -2
Query: 454 ELRKPLPQKMSL*TPRSTVLGFLVDECLQVLYDRVQARYNNIA---EAAVVLLWTYLSDE 284
+LR+P L R+ +LG+LVD C V DR+Q Y ++A + + +LW L
Sbjct: 423 QLRQPEKALQILEYGRALILGYLVDSCSDV--DRLQEDYPDLAKEYDQLLFILWQRLDSV 480
Query: 283 FVFNR 269
NR
Sbjct: 481 HAENR 485
>UniRef50_UPI00015B4E13 Cluster: PREDICTED: similar to conserved
hypothetical protein; n=1; Nasonia vitripennis|Rep:
PREDICTED: similar to conserved hypothetical protein -
Nasonia vitripennis
Length = 826
Score = 33.1 bits (72), Expect = 3.8
Identities = 16/40 (40%), Positives = 20/40 (50%)
Frame = +2
Query: 278 NEFIREVRPEEYHCGFCNIIIPGLDAIVEHLKTLVHKKAK 397
N I V EY C FC+ IP L + EH+ H KA+
Sbjct: 68 NNGIIPVSSREYKCTFCSSTIPNLVHVSEHINGKKHIKAR 107
>UniRef50_UPI0000D574D0 Cluster: PREDICTED: similar to CG6143-PB,
isoform B; n=1; Tribolium castaneum|Rep: PREDICTED:
similar to CG6143-PB, isoform B - Tribolium castaneum
Length = 352
Score = 33.1 bits (72), Expect = 3.8
Identities = 15/42 (35%), Positives = 25/42 (59%)
Frame = +2
Query: 272 VENEFIREVRPEEYHCGFCNIIIPGLDAIVEHLKTLVHKKAK 397
++N+FIR+ + E HC C++ L I+ H KT H++ K
Sbjct: 56 LKNKFIRKFQEPESHCNMCDLKF--LGKIITHRKTEGHQRLK 95
>UniRef50_Q5BKZ1 Cluster: Zinc finger protein 326; n=7; Amniota|Rep:
Zinc finger protein 326 - Homo sapiens (Human)
Length = 582
Score = 33.1 bits (72), Expect = 3.8
Identities = 20/70 (28%), Positives = 37/70 (52%), Gaps = 3/70 (4%)
Frame = +2
Query: 224 ETRSCDEGNPIIVIDSVENEFIRE--VRPEEYHCGFCNIIIPGL-DAIVEHLKTLVHKKA 394
+T + E II D +E + + ++ E HC C++ IP L ++ +HLK+ H K
Sbjct: 374 QTNNQTEVVKIIEKDVMEGVTVDDHMMKVETVHCSACSVYIPALHSSVQQHLKSPDHIKG 433
Query: 395 KNSASWRLQR 424
K + +++R
Sbjct: 434 KQAYKEQIKR 443
>UniRef50_Q5DFM7 Cluster: SJCHGC09123 protein; n=1; Schistosoma
japonicum|Rep: SJCHGC09123 protein - Schistosoma
japonicum (Blood fluke)
Length = 408
Score = 32.7 bits (71), Expect = 5.0
Identities = 17/57 (29%), Positives = 31/57 (54%), Gaps = 3/57 (5%)
Frame = +2
Query: 263 IDSVENEFIREVRPEEYHCGFCNIIIPGLDAIVEHLKTLVHK---KAKNSASWRLQR 424
ID +E+ +RE + Y C CN + G+D + HL ++ H+ K++ W +Q+
Sbjct: 339 IDELESTPLREKK--FYRCSLCNTNLIGVDNLENHLHSVEHQEQYKSRVDPQWIIQK 393
>UniRef50_UPI00015B62F8 Cluster: PREDICTED: hypothetical protein; n=1;
Nasonia vitripennis|Rep: PREDICTED: hypothetical protein
- Nasonia vitripennis
Length = 3949
Score = 32.3 bits (70), Expect = 6.7
Identities = 15/45 (33%), Positives = 24/45 (53%)
Frame = +2
Query: 293 EVRPEEYHCGFCNIIIPGLDAIVEHLKTLVHKKAKNSASWRLQRH 427
E + Y+C +CN+ LDAI H K ++H SA ++ + H
Sbjct: 3616 EKKATVYYCYYCNMGSTSLDAIRSHWK-MIHTNDSKSAIFKYKEH 3659
>UniRef50_Q4N1W8 Cluster: Putative uncharacterized protein; n=2;
Theileria|Rep: Putative uncharacterized protein -
Theileria parva
Length = 921
Score = 32.3 bits (70), Expect = 6.7
Identities = 22/77 (28%), Positives = 42/77 (54%), Gaps = 2/77 (2%)
Frame = -1
Query: 245 LHRSFVSHSSLVGVNLIKR*FELASLTFQSVRVRYQIKAEYIHNNSPVNDDV-FVSCRIM 69
L RS ++ VNL KR L+S +F + + YQ+++E + N +V F++ RI+
Sbjct: 161 LSRSTINSPYFYEVNLSKRKPNLSSASFYDLNLAYQMESEKKKGETHFNRNVSFINLRIL 220
Query: 68 FNHENGIDELMQRL-PF 21
+ + +++R+ PF
Sbjct: 221 SDSNDVWKHIVKRVEPF 237
>UniRef50_Q9C0A1 Cluster: Zinc finger homeobox protein 2; n=20;
Theria|Rep: Zinc finger homeobox protein 2 - Homo sapiens
(Human)
Length = 1427
Score = 32.3 bits (70), Expect = 6.7
Identities = 9/27 (33%), Positives = 18/27 (66%)
Frame = +2
Query: 311 YHCGFCNIIIPGLDAIVEHLKTLVHKK 391
YHC C +++ G +A+ HL++ H++
Sbjct: 1350 YHCLACEVLLSGREALASHLRSSAHRR 1376
>UniRef50_A0BQD0 Cluster: Chromosome undetermined scaffold_120,
whole genome shotgun sequence; n=3; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_120,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 609
Score = 31.9 bits (69), Expect = 8.8
Identities = 14/45 (31%), Positives = 25/45 (55%)
Frame = +2
Query: 329 NIIIPGLDAIVEHLKTLVHKKAKNSASWRLQRHLLRKRLSEFSLN 463
NI+ PG++ +EH + LV K K S + ++K++ +F N
Sbjct: 370 NILAPGINEFIEHQRQLVAKNMKKQISLIQLLNKIKKKVEKFGPN 414
>UniRef50_Q5U3C1 Cluster: ZFHX4 protein; n=11; Tetrapoda|Rep: ZFHX4
protein - Homo sapiens (Human)
Length = 578
Score = 31.9 bits (69), Expect = 8.8
Identities = 16/52 (30%), Positives = 28/52 (53%)
Frame = +2
Query: 236 CDEGNPIIVIDSVENEFIREVRPEEYHCGFCNIIIPGLDAIVEHLKTLVHKK 391
C G P+I E + V +Y C C++ I G +A+ +HL++ +HK+
Sbjct: 388 CYFGQPLID----PQETVLRVPVSKYQCLACDVAISGNEALSQHLQSSLHKE 435
>UniRef50_Q86UP3 Cluster: Zinc finger homeobox protein 4; n=18;
Eukaryota|Rep: Zinc finger homeobox protein 4 - Homo
sapiens (Human)
Length = 3567
Score = 31.9 bits (69), Expect = 8.8
Identities = 16/52 (30%), Positives = 28/52 (53%)
Frame = +2
Query: 236 CDEGNPIIVIDSVENEFIREVRPEEYHCGFCNIIIPGLDAIVEHLKTLVHKK 391
C G P+I E + V +Y C C++ I G +A+ +HL++ +HK+
Sbjct: 3377 CYFGQPLID----PQETVLRVPVSKYQCLACDVAISGNEALSQHLQSSLHKE 3424
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 471,245,763
Number of Sequences: 1657284
Number of extensions: 8793171
Number of successful extensions: 24399
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 23712
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 24398
length of database: 575,637,011
effective HSP length: 95
effective length of database: 418,195,031
effective search space used: 31364627325
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -