Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= br--1478X
         (512 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ342040-1|ABC69932.1|  822|Tribolium castaneum STIP protein.          24   0.69 
EU019709-1|ABU25221.1|  540|Tribolium castaneum aspartate 1-deca...    24   0.91 
AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase ...    22   2.8  
AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase ...    22   2.8  
AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase ...    22   2.8  
AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase ...    22   2.8  
AM292377-1|CAL23189.2|  358|Tribolium castaneum gustatory recept...    22   2.8  
AM292342-1|CAL23154.2|  386|Tribolium castaneum gustatory recept...    22   2.8  
EF125544-1|ABL73928.1|  279|Tribolium castaneum obstractor B pro...    22   3.7  
AM292334-1|CAL23146.2|  390|Tribolium castaneum gustatory recept...    21   4.9  
AM292333-1|CAL23145.2|  316|Tribolium castaneum gustatory recept...    21   4.9  
AJ518941-1|CAD57735.1|  456|Tribolium castaneum homothorax protein.    21   8.5  

>DQ342040-1|ABC69932.1|  822|Tribolium castaneum STIP protein.
          Length = 822

 Score = 24.2 bits (50), Expect = 0.69
 Identities = 10/24 (41%), Positives = 14/24 (58%)
 Frame = +2

Query: 359 VEHLKTLVHKKAKNSASWRLQRHL 430
           VEH + +VHKK  N     +Q +L
Sbjct: 298 VEHFEDVVHKKCSNFTLPEIQHNL 321


>EU019709-1|ABU25221.1|  540|Tribolium castaneum aspartate
           1-decarboxylase protein.
          Length = 540

 Score = 23.8 bits (49), Expect = 0.91
 Identities = 16/63 (25%), Positives = 27/63 (42%), Gaps = 1/63 (1%)
 Frame = +1

Query: 277 KRIHQRGTSRGVPLRLLQYYYTGLGRDRRALEDTRPQESQE-QCFVASTKTSSEEEAF*V 453
           +R+H+      V + L +  + G  R  R L+   P+E +    F   +  S+ EE   V
Sbjct: 59  RRLHEEFLRSSVDVLLQEAVFEGTNRKNRVLQWREPEELRRLMDFGVRSAPSTHEELLEV 118

Query: 454 QPK 462
             K
Sbjct: 119 LKK 121


>AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase
           variant 2 protein.
          Length = 1558

 Score = 22.2 bits (45), Expect = 2.8
 Identities = 12/52 (23%), Positives = 23/52 (44%)
 Frame = -3

Query: 408 EALFLAFLWTSVFKCSTIASKPGIIILQKPQWYSSGRTSLMNSFSTESITIM 253
           ++ +  +++ SV+KC         I+L K    +   T     FST  I ++
Sbjct: 293 QSRYFIYMFVSVWKCLLFFVSVLFILLVKEGEVAFFFTQFSEGFSTHQIQVL 344


>AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase
           variant 1 protein.
          Length = 1558

 Score = 22.2 bits (45), Expect = 2.8
 Identities = 12/52 (23%), Positives = 23/52 (44%)
 Frame = -3

Query: 408 EALFLAFLWTSVFKCSTIASKPGIIILQKPQWYSSGRTSLMNSFSTESITIM 253
           ++ +  +++ SV+KC         I+L K    +   T     FST  I ++
Sbjct: 293 QSRYFIYMFVSVWKCLLFFVSVLFILLVKEGEVAFFFTQFSEGFSTHQIQVL 344


>AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase
           CHS1B protein.
          Length = 1558

 Score = 22.2 bits (45), Expect = 2.8
 Identities = 12/52 (23%), Positives = 23/52 (44%)
 Frame = -3

Query: 408 EALFLAFLWTSVFKCSTIASKPGIIILQKPQWYSSGRTSLMNSFSTESITIM 253
           ++ +  +++ SV+KC         I+L K    +   T     FST  I ++
Sbjct: 293 QSRYFIYMFVSVWKCLLFFVSVLFILLVKEGEVAFFFTQFSEGFSTHQIQVL 344


>AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase
           CHS1A protein.
          Length = 1558

 Score = 22.2 bits (45), Expect = 2.8
 Identities = 12/52 (23%), Positives = 23/52 (44%)
 Frame = -3

Query: 408 EALFLAFLWTSVFKCSTIASKPGIIILQKPQWYSSGRTSLMNSFSTESITIM 253
           ++ +  +++ SV+KC         I+L K    +   T     FST  I ++
Sbjct: 293 QSRYFIYMFVSVWKCLLFFVSVLFILLVKEGEVAFFFTQFSEGFSTHQIQVL 344


>AM292377-1|CAL23189.2|  358|Tribolium castaneum gustatory receptor
           candidate 56 protein.
          Length = 358

 Score = 22.2 bits (45), Expect = 2.8
 Identities = 13/46 (28%), Positives = 23/46 (50%), Gaps = 1/46 (2%)
 Frame = +2

Query: 305 EEYHCGFCNIIIPGLDAIVEHLKTLVHKKAKNSA-SWRLQRHLLRK 439
           E  +C + NI+      + E+L+TLV +  + S   W    ++ RK
Sbjct: 195 ELQYCHYLNILRVRYQLLNEYLETLVQETNRTSVEGWTDVSNVKRK 240


>AM292342-1|CAL23154.2|  386|Tribolium castaneum gustatory receptor
           candidate 21 protein.
          Length = 386

 Score = 22.2 bits (45), Expect = 2.8
 Identities = 13/46 (28%), Positives = 23/46 (50%), Gaps = 1/46 (2%)
 Frame = +2

Query: 305 EEYHCGFCNIIIPGLDAIVEHLKTLVHKKAKNSA-SWRLQRHLLRK 439
           E  +C + NI+      + E+L+TLV +  + S   W    ++ RK
Sbjct: 195 ELQYCHYLNILRVRYQLLNEYLETLVQETNRTSVEGWTDVSNVKRK 240


>EF125544-1|ABL73928.1|  279|Tribolium castaneum obstractor B
           protein.
          Length = 279

 Score = 21.8 bits (44), Expect = 3.7
 Identities = 8/24 (33%), Positives = 12/24 (50%)
 Frame = +3

Query: 132 FYLVTNTDTLKCQACEFELTFDQI 203
           FY+  N DT +   C+    FD +
Sbjct: 195 FYVCINGDTPRRSGCKLGQVFDDV 218


>AM292334-1|CAL23146.2|  390|Tribolium castaneum gustatory receptor
           candidate 13 protein.
          Length = 390

 Score = 21.4 bits (43), Expect = 4.9
 Identities = 6/20 (30%), Positives = 15/20 (75%)
 Frame = -3

Query: 408 EALFLAFLWTSVFKCSTIAS 349
           +A+FL F+  +++ C T+++
Sbjct: 186 QAIFLMFVSYNIYVCQTVSN 205


>AM292333-1|CAL23145.2|  316|Tribolium castaneum gustatory receptor
           candidate 12 protein.
          Length = 316

 Score = 21.4 bits (43), Expect = 4.9
 Identities = 6/20 (30%), Positives = 15/20 (75%)
 Frame = -3

Query: 408 EALFLAFLWTSVFKCSTIAS 349
           +A+FL F+  +++ C T+++
Sbjct: 112 QAIFLMFVSYNIYVCQTVSN 131


>AJ518941-1|CAD57735.1|  456|Tribolium castaneum homothorax protein.
          Length = 456

 Score = 20.6 bits (41), Expect = 8.5
 Identities = 8/31 (25%), Positives = 15/31 (48%)
 Frame = -3

Query: 357 IASKPGIIILQKPQWYSSGRTSLMNSFSTES 265
           +A   G+ ILQ   W+ + R  ++     +S
Sbjct: 370 LAQDTGLTILQVNNWFINARRRIVQPMIDQS 400


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 112,675
Number of Sequences: 336
Number of extensions: 2268
Number of successful extensions: 12
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 122,585
effective HSP length: 53
effective length of database: 104,777
effective search space used: 12258909
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)