BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= br--1478X
(512 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC090866-1|AAH90866.1| 582|Homo sapiens zinc finger protein 326... 33 0.59
BC070341-1|AAH70341.1| 508|Homo sapiens ZNF326 protein protein. 33 0.59
AL391497-9|CAH72232.1| 376|Homo sapiens zinc finger protein 326... 33 0.59
AL391497-6|CAH72228.1| 582|Homo sapiens zinc finger protein 326... 33 0.59
AL391497-5|CAH72229.1| 493|Homo sapiens zinc finger protein 326... 33 0.59
AL161797-4|CAI23076.1| 376|Homo sapiens zinc finger protein 326... 33 0.59
AL161797-2|CAI23073.1| 582|Homo sapiens zinc finger protein 326... 33 0.59
AL161797-1|CAI23074.1| 493|Homo sapiens zinc finger protein 326... 33 0.59
AB051549-1|BAB21853.1| 1460|Homo sapiens KIAA1762 protein protein. 32 1.0
BC085610-1|AAH85610.1| 578|Homo sapiens ZFHX4 protein protein. 32 1.4
BC074736-1|AAH74736.2| 332|Homo sapiens ZFHX4 protein protein. 32 1.4
BC047745-1|AAH47745.2| 507|Homo sapiens ZFHX4 protein protein. 32 1.4
AY260762-1|AAP20225.1| 3567|Homo sapiens zinc finger homeodomain... 32 1.4
AK131462-1|BAD18607.1| 1103|Homo sapiens protein ( Homo sapiens ... 32 1.4
AK024633-1|BAB14939.1| 324|Homo sapiens protein ( Homo sapiens ... 32 1.4
AB083343-1|BAE96598.1| 3599|Homo sapiens zinc-finger homeodomain... 32 1.4
BC071589-1|AAH71589.1| 1131|Homo sapiens ADNP homeobox 2 protein. 31 2.4
AB020670-1|BAA74886.2| 1181|Homo sapiens KIAA0863 protein protein. 31 2.4
Z98050-1|CAI21070.1| 2717|Homo sapiens human immunodeficiency vi... 30 4.1
X51435-1|CAA35798.1| 2717|Homo sapiens protein ( Human PRDII-BF1... 30 4.1
M32019-1|AAA17534.1| 1902|Homo sapiens protein ( Human DNA-bindi... 30 4.1
J05011-1|AAA17533.1| 345|Homo sapiens HIV-1 enhancer binding pr... 30 4.1
BC047719-1|AAH47719.1| 723|Homo sapiens transmembrane channel-l... 30 4.1
BC036205-1|AAH36205.1| 723|Homo sapiens transmembrane channel-l... 30 4.1
AY673640-1|AAV85766.1| 684|Homo sapiens cirhin interaction prot... 30 4.1
AY263165-1|AAP78780.1| 723|Homo sapiens TMC7 protein protein. 30 4.1
AY236498-1|AAP69876.1| 723|Homo sapiens transmembrane channel-l... 30 4.1
AL391828-1|CAH73909.1| 2717|Homo sapiens human immunodeficiency ... 30 4.1
AL157373-1|CAH73982.1| 2717|Homo sapiens human immunodeficiency ... 30 4.1
AL137221-1|CAI14768.1| 2717|Homo sapiens human immunodeficiency ... 30 4.1
BC000713-1|AAH00713.1| 646|Homo sapiens A kinase (PRKA) anchor ... 30 5.5
AJ243467-1|CAB65092.1| 646|Homo sapiens LA95 protein protein. 30 5.5
AF199414-1|AAF86048.1| 648|Homo sapiens RNA helicase A binding ... 30 5.5
AB025905-1|BAA85003.1| 646|Homo sapiens neighbor of A-kinase an... 30 5.5
>BC090866-1|AAH90866.1| 582|Homo sapiens zinc finger protein 326
protein.
Length = 582
Score = 33.1 bits (72), Expect = 0.59
Identities = 20/70 (28%), Positives = 37/70 (52%), Gaps = 3/70 (4%)
Frame = +2
Query: 224 ETRSCDEGNPIIVIDSVENEFIRE--VRPEEYHCGFCNIIIPGL-DAIVEHLKTLVHKKA 394
+T + E II D +E + + ++ E HC C++ IP L ++ +HLK+ H K
Sbjct: 374 QTNNQTEVVKIIEKDVMEGVTVDDHMMKVETVHCSACSVYIPALHSSVQQHLKSPDHIKG 433
Query: 395 KNSASWRLQR 424
K + +++R
Sbjct: 434 KQAYKEQIKR 443
>BC070341-1|AAH70341.1| 508|Homo sapiens ZNF326 protein protein.
Length = 508
Score = 33.1 bits (72), Expect = 0.59
Identities = 20/70 (28%), Positives = 37/70 (52%), Gaps = 3/70 (4%)
Frame = +2
Query: 224 ETRSCDEGNPIIVIDSVENEFIRE--VRPEEYHCGFCNIIIPGL-DAIVEHLKTLVHKKA 394
+T + E II D +E + + ++ E HC C++ IP L ++ +HLK+ H K
Sbjct: 374 QTNNQTEVVKIIEKDVMEGVTVDDHMMKVETVHCSACSVYIPALHSSVQQHLKSPDHIKG 433
Query: 395 KNSASWRLQR 424
K + +++R
Sbjct: 434 KQAYKEQIKR 443
>AL391497-9|CAH72232.1| 376|Homo sapiens zinc finger protein 326
protein.
Length = 376
Score = 33.1 bits (72), Expect = 0.59
Identities = 20/70 (28%), Positives = 37/70 (52%), Gaps = 3/70 (4%)
Frame = +2
Query: 224 ETRSCDEGNPIIVIDSVENEFIRE--VRPEEYHCGFCNIIIPGL-DAIVEHLKTLVHKKA 394
+T + E II D +E + + ++ E HC C++ IP L ++ +HLK+ H K
Sbjct: 168 QTNNQTEVVKIIEKDVMEGVTVDDHMMKVETVHCSACSVYIPALHSSVQQHLKSPDHIKG 227
Query: 395 KNSASWRLQR 424
K + +++R
Sbjct: 228 KQAYKEQIKR 237
>AL391497-6|CAH72228.1| 582|Homo sapiens zinc finger protein 326
protein.
Length = 582
Score = 33.1 bits (72), Expect = 0.59
Identities = 20/70 (28%), Positives = 37/70 (52%), Gaps = 3/70 (4%)
Frame = +2
Query: 224 ETRSCDEGNPIIVIDSVENEFIRE--VRPEEYHCGFCNIIIPGL-DAIVEHLKTLVHKKA 394
+T + E II D +E + + ++ E HC C++ IP L ++ +HLK+ H K
Sbjct: 374 QTNNQTEVVKIIEKDVMEGVTVDDHMMKVETVHCSACSVYIPALHSSVQQHLKSPDHIKG 433
Query: 395 KNSASWRLQR 424
K + +++R
Sbjct: 434 KQAYKEQIKR 443
>AL391497-5|CAH72229.1| 493|Homo sapiens zinc finger protein 326
protein.
Length = 493
Score = 33.1 bits (72), Expect = 0.59
Identities = 20/70 (28%), Positives = 37/70 (52%), Gaps = 3/70 (4%)
Frame = +2
Query: 224 ETRSCDEGNPIIVIDSVENEFIRE--VRPEEYHCGFCNIIIPGL-DAIVEHLKTLVHKKA 394
+T + E II D +E + + ++ E HC C++ IP L ++ +HLK+ H K
Sbjct: 285 QTNNQTEVVKIIEKDVMEGVTVDDHMMKVETVHCSACSVYIPALHSSVQQHLKSPDHIKG 344
Query: 395 KNSASWRLQR 424
K + +++R
Sbjct: 345 KQAYKEQIKR 354
>AL161797-4|CAI23076.1| 376|Homo sapiens zinc finger protein 326
protein.
Length = 376
Score = 33.1 bits (72), Expect = 0.59
Identities = 20/70 (28%), Positives = 37/70 (52%), Gaps = 3/70 (4%)
Frame = +2
Query: 224 ETRSCDEGNPIIVIDSVENEFIRE--VRPEEYHCGFCNIIIPGL-DAIVEHLKTLVHKKA 394
+T + E II D +E + + ++ E HC C++ IP L ++ +HLK+ H K
Sbjct: 168 QTNNQTEVVKIIEKDVMEGVTVDDHMMKVETVHCSACSVYIPALHSSVQQHLKSPDHIKG 227
Query: 395 KNSASWRLQR 424
K + +++R
Sbjct: 228 KQAYKEQIKR 237
>AL161797-2|CAI23073.1| 582|Homo sapiens zinc finger protein 326
protein.
Length = 582
Score = 33.1 bits (72), Expect = 0.59
Identities = 20/70 (28%), Positives = 37/70 (52%), Gaps = 3/70 (4%)
Frame = +2
Query: 224 ETRSCDEGNPIIVIDSVENEFIRE--VRPEEYHCGFCNIIIPGL-DAIVEHLKTLVHKKA 394
+T + E II D +E + + ++ E HC C++ IP L ++ +HLK+ H K
Sbjct: 374 QTNNQTEVVKIIEKDVMEGVTVDDHMMKVETVHCSACSVYIPALHSSVQQHLKSPDHIKG 433
Query: 395 KNSASWRLQR 424
K + +++R
Sbjct: 434 KQAYKEQIKR 443
>AL161797-1|CAI23074.1| 493|Homo sapiens zinc finger protein 326
protein.
Length = 493
Score = 33.1 bits (72), Expect = 0.59
Identities = 20/70 (28%), Positives = 37/70 (52%), Gaps = 3/70 (4%)
Frame = +2
Query: 224 ETRSCDEGNPIIVIDSVENEFIRE--VRPEEYHCGFCNIIIPGL-DAIVEHLKTLVHKKA 394
+T + E II D +E + + ++ E HC C++ IP L ++ +HLK+ H K
Sbjct: 285 QTNNQTEVVKIIEKDVMEGVTVDDHMMKVETVHCSACSVYIPALHSSVQQHLKSPDHIKG 344
Query: 395 KNSASWRLQR 424
K + +++R
Sbjct: 345 KQAYKEQIKR 354
>AB051549-1|BAB21853.1| 1460|Homo sapiens KIAA1762 protein protein.
Length = 1460
Score = 32.3 bits (70), Expect = 1.0
Identities = 9/27 (33%), Positives = 18/27 (66%)
Frame = +2
Query: 311 YHCGFCNIIIPGLDAIVEHLKTLVHKK 391
YHC C +++ G +A+ HL++ H++
Sbjct: 1383 YHCLACEVLLSGREALASHLRSSAHRR 1409
>BC085610-1|AAH85610.1| 578|Homo sapiens ZFHX4 protein protein.
Length = 578
Score = 31.9 bits (69), Expect = 1.4
Identities = 16/52 (30%), Positives = 28/52 (53%)
Frame = +2
Query: 236 CDEGNPIIVIDSVENEFIREVRPEEYHCGFCNIIIPGLDAIVEHLKTLVHKK 391
C G P+I E + V +Y C C++ I G +A+ +HL++ +HK+
Sbjct: 388 CYFGQPLID----PQETVLRVPVSKYQCLACDVAISGNEALSQHLQSSLHKE 435
>BC074736-1|AAH74736.2| 332|Homo sapiens ZFHX4 protein protein.
Length = 332
Score = 31.9 bits (69), Expect = 1.4
Identities = 16/52 (30%), Positives = 28/52 (53%)
Frame = +2
Query: 236 CDEGNPIIVIDSVENEFIREVRPEEYHCGFCNIIIPGLDAIVEHLKTLVHKK 391
C G P+I E + V +Y C C++ I G +A+ +HL++ +HK+
Sbjct: 142 CYFGQPLID----PQETVLRVPVSKYQCLACDVAISGNEALSQHLQSSLHKE 189
>BC047745-1|AAH47745.2| 507|Homo sapiens ZFHX4 protein protein.
Length = 507
Score = 31.9 bits (69), Expect = 1.4
Identities = 16/52 (30%), Positives = 28/52 (53%)
Frame = +2
Query: 236 CDEGNPIIVIDSVENEFIREVRPEEYHCGFCNIIIPGLDAIVEHLKTLVHKK 391
C G P+I E + V +Y C C++ I G +A+ +HL++ +HK+
Sbjct: 317 CYFGQPLID----PQETVLRVPVSKYQCLACDVAISGNEALSQHLQSSLHKE 364
>AY260762-1|AAP20225.1| 3567|Homo sapiens zinc finger homeodomain 4
protein protein.
Length = 3567
Score = 31.9 bits (69), Expect = 1.4
Identities = 16/52 (30%), Positives = 28/52 (53%)
Frame = +2
Query: 236 CDEGNPIIVIDSVENEFIREVRPEEYHCGFCNIIIPGLDAIVEHLKTLVHKK 391
C G P+I E + V +Y C C++ I G +A+ +HL++ +HK+
Sbjct: 3377 CYFGQPLID----PQETVLRVPVSKYQCLACDVAISGNEALSQHLQSSLHKE 3424
>AK131462-1|BAD18607.1| 1103|Homo sapiens protein ( Homo sapiens cDNA
FLJ16624 fis, clone TESTI4015442, moderately similar to
Mus musculus zinc finger homeodomain 4 (Zfh4-pending). ).
Length = 1103
Score = 31.9 bits (69), Expect = 1.4
Identities = 16/52 (30%), Positives = 28/52 (53%)
Frame = +2
Query: 236 CDEGNPIIVIDSVENEFIREVRPEEYHCGFCNIIIPGLDAIVEHLKTLVHKK 391
C G P+I E + V +Y C C++ I G +A+ +HL++ +HK+
Sbjct: 913 CYFGQPLID----PQETVLRVPVSKYQCLACDVAISGNEALSQHLQSSLHKE 960
>AK024633-1|BAB14939.1| 324|Homo sapiens protein ( Homo sapiens
cDNA: FLJ20980 fis, clone ADSU01986. ).
Length = 324
Score = 31.9 bits (69), Expect = 1.4
Identities = 16/52 (30%), Positives = 28/52 (53%)
Frame = +2
Query: 236 CDEGNPIIVIDSVENEFIREVRPEEYHCGFCNIIIPGLDAIVEHLKTLVHKK 391
C G P+I E + V +Y C C++ I G +A+ +HL++ +HK+
Sbjct: 134 CYFGQPLID----PQETVLRVPVSKYQCLACDVAISGNEALSQHLQSSLHKE 181
>AB083343-1|BAE96598.1| 3599|Homo sapiens zinc-finger homeodomain
protein 4 protein.
Length = 3599
Score = 31.9 bits (69), Expect = 1.4
Identities = 16/52 (30%), Positives = 28/52 (53%)
Frame = +2
Query: 236 CDEGNPIIVIDSVENEFIREVRPEEYHCGFCNIIIPGLDAIVEHLKTLVHKK 391
C G P+I E + V +Y C C++ I G +A+ +HL++ +HK+
Sbjct: 3409 CYFGQPLID----PQETVLRVPVSKYQCLACDVAISGNEALSQHLQSSLHKE 3456
>BC071589-1|AAH71589.1| 1131|Homo sapiens ADNP homeobox 2 protein.
Length = 1131
Score = 31.1 bits (67), Expect = 2.4
Identities = 14/49 (28%), Positives = 25/49 (51%), Gaps = 1/49 (2%)
Frame = +2
Query: 302 PEEYHCGFCNIIIPGLDAIVEHLKTL-VHKKAKNSASWRLQRHLLRKRL 445
P++Y+C CN DA++ H+ T +H+ +N + H+ R L
Sbjct: 212 PDKYYCKKCNANASSQDALMYHILTSDIHRDLENKLRSVISEHIKRTGL 260
>AB020670-1|BAA74886.2| 1181|Homo sapiens KIAA0863 protein protein.
Length = 1181
Score = 31.1 bits (67), Expect = 2.4
Identities = 14/49 (28%), Positives = 25/49 (51%), Gaps = 1/49 (2%)
Frame = +2
Query: 302 PEEYHCGFCNIIIPGLDAIVEHLKTL-VHKKAKNSASWRLQRHLLRKRL 445
P++Y+C CN DA++ H+ T +H+ +N + H+ R L
Sbjct: 262 PDKYYCKKCNANASSQDALMYHILTSDIHRDLENKLRSVISEHIKRTGL 310
>Z98050-1|CAI21070.1| 2717|Homo sapiens human immunodeficiency virus
type I enhancer binding protein 1 protein.
Length = 2717
Score = 30.3 bits (65), Expect = 4.1
Identities = 12/33 (36%), Positives = 18/33 (54%)
Frame = +2
Query: 293 EVRPEEYHCGFCNIIIPGLDAIVEHLKTLVHKK 391
+VRP YHC +CN + +H+K+ H K
Sbjct: 2111 DVRP--YHCTYCNFSFKTKGNLTKHMKSKAHSK 2141
>X51435-1|CAA35798.1| 2717|Homo sapiens protein ( Human PRDII-BF1 gene
for a DNA-binding protein. ).
Length = 2717
Score = 30.3 bits (65), Expect = 4.1
Identities = 12/33 (36%), Positives = 18/33 (54%)
Frame = +2
Query: 293 EVRPEEYHCGFCNIIIPGLDAIVEHLKTLVHKK 391
+VRP YHC +CN + +H+K+ H K
Sbjct: 2111 DVRP--YHCTYCNFSFKTKGNLTKHMKSKAHSK 2141
>M32019-1|AAA17534.1| 1902|Homo sapiens protein ( Human DNA-binding
protein (mbp-1) mRNA, complete cds. ).
Length = 1902
Score = 30.3 bits (65), Expect = 4.1
Identities = 12/33 (36%), Positives = 18/33 (54%)
Frame = +2
Query: 293 EVRPEEYHCGFCNIIIPGLDAIVEHLKTLVHKK 391
+VRP YHC +CN + +H+K+ H K
Sbjct: 1296 DVRP--YHCTYCNFSFKTKGNLTKHMKSKAHSK 1326
>J05011-1|AAA17533.1| 345|Homo sapiens HIV-1 enhancer binding
protein protein.
Length = 345
Score = 30.3 bits (65), Expect = 4.1
Identities = 12/33 (36%), Positives = 18/33 (54%)
Frame = +2
Query: 293 EVRPEEYHCGFCNIIIPGLDAIVEHLKTLVHKK 391
+VRP YHC +CN + +H+K+ H K
Sbjct: 65 DVRP--YHCTYCNFSFKTKGNLTKHMKSKAHSK 95
>BC047719-1|AAH47719.1| 723|Homo sapiens transmembrane channel-like
7 protein.
Length = 723
Score = 30.3 bits (65), Expect = 4.1
Identities = 19/67 (28%), Positives = 32/67 (47%), Gaps = 2/67 (2%)
Frame = +2
Query: 257 IVIDSVENEFIREVRPEEYHCGFCNIIIPGLDAIVEH--LKTLVHKKAKNSASWRLQRHL 430
IV SVE I +R EE+ +CN I G D + + + L H + L+
Sbjct: 283 IVKRSVEGFKINLIRSEEHFQSYCNKIFAGWDFCITNRSMADLKHSSLRYELRADLEEER 342
Query: 431 LRKRLSE 451
+R++++E
Sbjct: 343 MRQKIAE 349
>BC036205-1|AAH36205.1| 723|Homo sapiens transmembrane channel-like
7 protein.
Length = 723
Score = 30.3 bits (65), Expect = 4.1
Identities = 19/67 (28%), Positives = 32/67 (47%), Gaps = 2/67 (2%)
Frame = +2
Query: 257 IVIDSVENEFIREVRPEEYHCGFCNIIIPGLDAIVEH--LKTLVHKKAKNSASWRLQRHL 430
IV SVE I +R EE+ +CN I G D + + + L H + L+
Sbjct: 283 IVKRSVEGFKINLIRSEEHFQSYCNKIFAGWDFCITNRSMADLKHSSLRYELRADLEEER 342
Query: 431 LRKRLSE 451
+R++++E
Sbjct: 343 MRQKIAE 349
>AY673640-1|AAV85766.1| 684|Homo sapiens cirhin interaction protein
protein.
Length = 684
Score = 30.3 bits (65), Expect = 4.1
Identities = 12/33 (36%), Positives = 18/33 (54%)
Frame = +2
Query: 293 EVRPEEYHCGFCNIIIPGLDAIVEHLKTLVHKK 391
+VRP YHC +CN + +H+K+ H K
Sbjct: 78 DVRP--YHCTYCNFSFKTKGNLTKHMKSKAHSK 108
>AY263165-1|AAP78780.1| 723|Homo sapiens TMC7 protein protein.
Length = 723
Score = 30.3 bits (65), Expect = 4.1
Identities = 19/67 (28%), Positives = 32/67 (47%), Gaps = 2/67 (2%)
Frame = +2
Query: 257 IVIDSVENEFIREVRPEEYHCGFCNIIIPGLDAIVEH--LKTLVHKKAKNSASWRLQRHL 430
IV SVE I +R EE+ +CN I G D + + + L H + L+
Sbjct: 283 IVKRSVEGFKINLIRSEEHFQSYCNKIFAGWDFCITNRSMADLKHSSLRYELRADLEEER 342
Query: 431 LRKRLSE 451
+R++++E
Sbjct: 343 MRQKIAE 349
>AY236498-1|AAP69876.1| 723|Homo sapiens transmembrane channel-like
protein 7 protein.
Length = 723
Score = 30.3 bits (65), Expect = 4.1
Identities = 19/67 (28%), Positives = 32/67 (47%), Gaps = 2/67 (2%)
Frame = +2
Query: 257 IVIDSVENEFIREVRPEEYHCGFCNIIIPGLDAIVEH--LKTLVHKKAKNSASWRLQRHL 430
IV SVE I +R EE+ +CN I G D + + + L H + L+
Sbjct: 283 IVKRSVEGFKINLIRSEEHFQSYCNKIFAGWDFCITNRSMADLKHSSLRYELRADLEEER 342
Query: 431 LRKRLSE 451
+R++++E
Sbjct: 343 MRQKIAE 349
>AL391828-1|CAH73909.1| 2717|Homo sapiens human immunodeficiency virus
type I enhancer binding protein 1 protein.
Length = 2717
Score = 30.3 bits (65), Expect = 4.1
Identities = 12/33 (36%), Positives = 18/33 (54%)
Frame = +2
Query: 293 EVRPEEYHCGFCNIIIPGLDAIVEHLKTLVHKK 391
+VRP YHC +CN + +H+K+ H K
Sbjct: 2111 DVRP--YHCTYCNFSFKTKGNLTKHMKSKAHSK 2141
>AL157373-1|CAH73982.1| 2717|Homo sapiens human immunodeficiency virus
type I enhancer binding protein 1 protein.
Length = 2717
Score = 30.3 bits (65), Expect = 4.1
Identities = 12/33 (36%), Positives = 18/33 (54%)
Frame = +2
Query: 293 EVRPEEYHCGFCNIIIPGLDAIVEHLKTLVHKK 391
+VRP YHC +CN + +H+K+ H K
Sbjct: 2111 DVRP--YHCTYCNFSFKTKGNLTKHMKSKAHSK 2141
>AL137221-1|CAI14768.1| 2717|Homo sapiens human immunodeficiency virus
type I enhancer binding protein 1 protein.
Length = 2717
Score = 30.3 bits (65), Expect = 4.1
Identities = 12/33 (36%), Positives = 18/33 (54%)
Frame = +2
Query: 293 EVRPEEYHCGFCNIIIPGLDAIVEHLKTLVHKK 391
+VRP YHC +CN + +H+K+ H K
Sbjct: 2111 DVRP--YHCTYCNFSFKTKGNLTKHMKSKAHSK 2141
>BC000713-1|AAH00713.1| 646|Homo sapiens A kinase (PRKA) anchor
protein 8-like protein.
Length = 646
Score = 29.9 bits (64), Expect = 5.5
Identities = 14/37 (37%), Positives = 23/37 (62%), Gaps = 1/37 (2%)
Frame = +2
Query: 284 FIREVRPEEYHCGFCNIIIPGLDAIVE-HLKTLVHKK 391
F+++V E HC C++ IP I++ HLKT+ H +
Sbjct: 475 FVKKV--EAAHCAACDLFIPMQFGIIQKHLKTMDHNR 509
>AJ243467-1|CAB65092.1| 646|Homo sapiens LA95 protein protein.
Length = 646
Score = 29.9 bits (64), Expect = 5.5
Identities = 14/37 (37%), Positives = 23/37 (62%), Gaps = 1/37 (2%)
Frame = +2
Query: 284 FIREVRPEEYHCGFCNIIIPGLDAIVE-HLKTLVHKK 391
F+++V E HC C++ IP I++ HLKT+ H +
Sbjct: 475 FVKKV--EAAHCAACDLFIPMQFGIIQKHLKTMDHNR 509
>AF199414-1|AAF86048.1| 648|Homo sapiens RNA helicase A binding
protein 95 protein.
Length = 648
Score = 29.9 bits (64), Expect = 5.5
Identities = 14/37 (37%), Positives = 23/37 (62%), Gaps = 1/37 (2%)
Frame = +2
Query: 284 FIREVRPEEYHCGFCNIIIPGLDAIVE-HLKTLVHKK 391
F+++V E HC C++ IP I++ HLKT+ H +
Sbjct: 475 FVKKV--EAAHCAACDLFIPMQFGIIQKHLKTMDHNR 509
>AB025905-1|BAA85003.1| 646|Homo sapiens neighbor of A-kinase
anchoring protein 95 protein.
Length = 646
Score = 29.9 bits (64), Expect = 5.5
Identities = 14/37 (37%), Positives = 23/37 (62%), Gaps = 1/37 (2%)
Frame = +2
Query: 284 FIREVRPEEYHCGFCNIIIPGLDAIVE-HLKTLVHKK 391
F+++V E HC C++ IP I++ HLKT+ H +
Sbjct: 475 FVKKV--EAAHCAACDLFIPMQFGIIQKHLKTMDHNR 509
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 67,393,492
Number of Sequences: 237096
Number of extensions: 1348570
Number of successful extensions: 3757
Number of sequences better than 10.0: 34
Number of HSP's better than 10.0 without gapping: 3547
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3757
length of database: 76,859,062
effective HSP length: 85
effective length of database: 56,705,902
effective search space used: 4820001670
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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