Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= br--1476
         (770 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF236124-1|AAF68382.1|  107|Anopheles gambiae thioredoxin 1 prot...    31   0.039

>AF236124-1|AAF68382.1|  107|Anopheles gambiae thioredoxin 1
           protein.
          Length = 107

 Score = 31.1 bits (67), Expect = 0.039
 Identities = 11/32 (34%), Positives = 20/32 (62%)
 Frame = +2

Query: 257 AMPTFIFYRNRTKIDRLEGGNTTVLENKVRQY 352
           +MPTF+F + +  + +  G N   LEN ++Q+
Sbjct: 74  SMPTFLFIKRKEVVGQFSGANAEKLENFIQQH 105



 Score = 26.2 bits (55), Expect = 1.1
 Identities = 11/27 (40%), Positives = 18/27 (66%)
 Frame = +1

Query: 91  VIQNDAHFQTEMANAGTKLVVVDFTAT 171
           ++++   F  ++  AG +LVVVDF AT
Sbjct: 4   MVKDSEDFNNKLEAAGDQLVVVDFFAT 30



 Score = 24.6 bits (51), Expect = 3.4
 Identities = 9/25 (36%), Positives = 14/25 (56%)
 Frame = +3

Query: 192 RAVFLKVDVDRCADTASAQGVVQCP 266
           + V +KVDVD C + A+   +   P
Sbjct: 52  KIVVVKVDVDECEELAAQYNIASMP 76


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 721,132
Number of Sequences: 2352
Number of extensions: 12244
Number of successful extensions: 26
Number of sequences better than 10.0: 1
Number of HSP's better than 10.0 without gapping: 24
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 26
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 80249979
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)