Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= br--1475
(822 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_Q9VQD8 Cluster: Actin-related protein 2/3 complex subun... 114 2e-24
UniRef50_Q7PWP6 Cluster: Actin-related protein 2/3 complex subun... 113 5e-24
UniRef50_Q9BPX5 Cluster: Actin-related protein 2/3 complex subun... 97 5e-19
UniRef50_Q4RIY8 Cluster: Actin-related protein 2/3 complex subun... 84 4e-15
UniRef50_Q86DV5 Cluster: Actin-related protein 2/3 complex subun... 79 1e-13
UniRef50_UPI0001553929 Cluster: PREDICTED: hypothetical protein;... 77 5e-13
UniRef50_Q5EN88 Cluster: Actin-related protein 2/3 complex subun... 77 7e-13
UniRef50_A3QX08 Cluster: Actin-related protein 2/3 complex subun... 75 2e-12
UniRef50_P91167 Cluster: Probable actin-related protein 2/3 comp... 65 2e-09
UniRef50_Q4PBX5 Cluster: Actin-related protein 2/3 complex subun... 63 7e-09
UniRef50_Q10316 Cluster: ARP2/3 complex 16 kDa subunit; n=1; Sch... 63 9e-09
UniRef50_O61861 Cluster: Actin-related protein 2/3 complex subun... 60 7e-08
UniRef50_Q6IPM3 Cluster: Actin-related protein 2/3 complex subun... 57 5e-07
UniRef50_UPI0000E4A8D0 Cluster: PREDICTED: similar to CD40-assoc... 56 1e-06
UniRef50_Q6C6B4 Cluster: Actin-related protein 2/3 complex subun... 52 1e-05
UniRef50_Q5KPF0 Cluster: Actin-related protein 2/3 complex subun... 52 2e-05
UniRef50_O96626 Cluster: Actin-related protein 2/3 complex subun... 47 7e-04
UniRef50_P40518 Cluster: ARP2/3 complex 16 kDa subunit; n=6; Sac... 44 0.005
UniRef50_Q2GV37 Cluster: Actin-related protein 2/3 complex subun... 31 0.050
UniRef50_Q9M117 Cluster: Actin-related protein 2/3 complex subun... 40 0.099
UniRef50_Q22T15 Cluster: Putative uncharacterized protein; n=1; ... 38 0.23
UniRef50_A2F412 Cluster: Actin-related protein 2/3 complex subun... 38 0.23
UniRef50_Q7NNZ9 Cluster: Gll0259 protein; n=1; Gloeobacter viola... 37 0.70
UniRef50_Q1E112 Cluster: Actin-related protein 2/3 complex subun... 34 4.9
UniRef50_Q26I63 Cluster: Putative uncharacterized protein; n=1; ... 33 6.5
UniRef50_A3M4C7 Cluster: PaaC; n=1; Acinetobacter baumannii ATCC... 33 6.5
UniRef50_A2DSM4 Cluster: Putative uncharacterized protein; n=2; ... 33 6.5
>UniRef50_Q9VQD8 Cluster: Actin-related protein 2/3 complex subunit
5; n=2; Sophophora|Rep: Actin-related protein 2/3
complex subunit 5 - Drosophila melanogaster (Fruit fly)
Length = 151
Score = 114 bits (275), Expect = 2e-24
Identities = 52/83 (62%), Positives = 68/83 (81%), Gaps = 1/83 (1%)
Frame = +2
Query: 263 LNNAPLGSSNQQVKENALTLTLKVLLAIKSAQIEEAVGSLSLDD-IDNLMKYIYKGFEFP 439
L NAPL NQ VK++AL +TL+VLL+IKS Q+++A+ +L +D ID LMKYIY+GFE P
Sbjct: 58 LQNAPLRCKNQNVKDHALNITLRVLLSIKSTQMDQAIDTLDQNDLIDVLMKYIYRGFEIP 117
Query: 440 SEGSSGHLLLWHDKAYSVGGLGC 508
SEGSSGHLL WH+KA++ GG+GC
Sbjct: 118 SEGSSGHLLQWHEKAFAKGGVGC 140
Score = 79.8 bits (188), Expect = 8e-14
Identities = 33/54 (61%), Positives = 44/54 (81%)
Frame = +3
Query: 93 MAKNTLSSAFRKIDIDQYNEDNFKEDEAEQAGPTGPDEGEVCSLLNQGRHIDAL 254
MAKNT S+AFRKID+DQYNEDNF+ED+ ++ GPDE E+ +LL QG+ ++AL
Sbjct: 1 MAKNTSSNAFRKIDVDQYNEDNFREDDGVESAAAGPDESEITTLLTQGKSVEAL 54
>UniRef50_Q7PWP6 Cluster: Actin-related protein 2/3 complex subunit
5; n=5; Endopterygota|Rep: Actin-related protein 2/3
complex subunit 5 - Anopheles gambiae str. PEST
Length = 156
Score = 113 bits (272), Expect = 5e-24
Identities = 54/83 (65%), Positives = 68/83 (81%), Gaps = 1/83 (1%)
Frame = +2
Query: 260 VLNNAPLGSSNQQVKENALTLTLKVLLAIKSAQIEEAVGSLSLDDI-DNLMKYIYKGFEF 436
VL NAPL NQQVK+NAL+LTL+VLL+IKS+QI+ A+ SL ++ D LMKYIY+GFE
Sbjct: 62 VLQNAPLMCKNQQVKDNALSLTLRVLLSIKSSQIDAAIESLDDPELCDVLMKYIYRGFEI 121
Query: 437 PSEGSSGHLLLWHDKAYSVGGLG 505
PSEGSSGHLL WH+K ++ GG+G
Sbjct: 122 PSEGSSGHLLTWHEKVFAKGGVG 144
Score = 62.1 bits (144), Expect = 2e-08
Identities = 27/31 (87%), Positives = 30/31 (96%)
Frame = +3
Query: 93 MAKNTLSSAFRKIDIDQYNEDNFKEDEAEQA 185
MAKNT SSAFRKID+DQYNEDNFKED+A+QA
Sbjct: 1 MAKNTSSSAFRKIDVDQYNEDNFKEDDADQA 31
>UniRef50_Q9BPX5 Cluster: Actin-related protein 2/3 complex subunit
5-like protein; n=62; Eumetazoa|Rep: Actin-related
protein 2/3 complex subunit 5-like protein - Homo
sapiens (Human)
Length = 153
Score = 97.1 bits (231), Expect = 5e-19
Identities = 47/81 (58%), Positives = 59/81 (72%)
Frame = +2
Query: 263 LNNAPLGSSNQQVKENALTLTLKVLLAIKSAQIEEAVGSLSLDDIDNLMKYIYKGFEFPS 442
L N+P+ + NQ VKE A + LKVL KS++IE+AV SL + +D LMKYIYKGFE P+
Sbjct: 61 LRNSPVNTKNQAVKERAQGVVLKVLTNFKSSEIEQAVQSLDRNGVDLLMKYIYKGFEKPT 120
Query: 443 EGSSGHLLLWHDKAYSVGGLG 505
E SS LL WH+KA +VGGLG
Sbjct: 121 ENSSAVLLQWHEKALAVGGLG 141
Score = 53.2 bits (122), Expect = 8e-06
Identities = 26/51 (50%), Positives = 35/51 (68%), Gaps = 3/51 (5%)
Frame = +3
Query: 93 MAKNTLSSAFRKIDIDQYNEDNF---KEDEAEQAGPTGPDEGEVCSLLNQG 236
MA+NTLSS FR++DID+++E+ F +E+ A A GPD EV LL QG
Sbjct: 1 MARNTLSSRFRRVDIDEFDENKFVDEQEEAAAAAAEPGPDPSEVDGLLRQG 51
>UniRef50_Q4RIY8 Cluster: Actin-related protein 2/3 complex subunit
5; n=3; Clupeocephala|Rep: Actin-related protein 2/3
complex subunit 5 - Tetraodon nigroviridis (Green
puffer)
Length = 216
Score = 84.2 bits (199), Expect = 4e-15
Identities = 40/76 (52%), Positives = 51/76 (67%)
Frame = +2
Query: 254 QLVLNNAPLGSSNQQVKENALTLTLKVLLAIKSAQIEEAVGSLSLDDIDNLMKYIYKGFE 433
Q VL N P+ + NQ KE A L ++VL + KS+ IE+AV SL +D LMKYIY+GFE
Sbjct: 60 QAVLKNPPINTKNQNTKERAELLVVRVLSSFKSSDIEKAVASLDRSGVDLLMKYIYRGFE 119
Query: 434 FPSEGSSGHLLLWHDK 481
PS+ SS LL WH+K
Sbjct: 120 RPSDNSSAVLLQWHEK 135
Score = 50.4 bits (115), Expect = 5e-05
Identities = 21/47 (44%), Positives = 32/47 (68%)
Frame = +3
Query: 93 MAKNTLSSAFRKIDIDQYNEDNFKEDEAEQAGPTGPDEGEVCSLLNQ 233
M+K+T+S FRK+D+D+Y+E+ F ++E GPDE EV + L Q
Sbjct: 1 MSKSTISDKFRKVDVDEYDENKFVDEEDGGESQGGPDEAEVDAFLRQ 47
>UniRef50_Q86DV5 Cluster: Actin-related protein 2/3 complex subunit
5; n=1; Schistosoma japonicum|Rep: Actin-related protein
2/3 complex subunit 5 - Schistosoma japonicum (Blood
fluke)
Length = 151
Score = 79.4 bits (187), Expect = 1e-13
Identities = 38/83 (45%), Positives = 54/83 (65%), Gaps = 1/83 (1%)
Frame = +2
Query: 260 VLNNAPLGSSNQQVKENALTLTLKVLLAIKSAQ-IEEAVGSLSLDDIDNLMKYIYKGFEF 436
+L NAP+ S + QVK+ A L +++L KS Q I++ + ++ D ID LMKYIY+GFE
Sbjct: 57 ILQNAPINSKDPQVKDTAFKLMMRLLSQFKSNQNIDDFLSTMDQDKIDLLMKYIYRGFEQ 116
Query: 437 PSEGSSGHLLLWHDKAYSVGGLG 505
P E S LL WH+K Y+ G +G
Sbjct: 117 PQEISCATLLTWHEKVYAYGKVG 139
Score = 43.6 bits (98), Expect = 0.006
Identities = 18/54 (33%), Positives = 34/54 (62%)
Frame = +3
Query: 93 MAKNTLSSAFRKIDIDQYNEDNFKEDEAEQAGPTGPDEGEVCSLLNQGRHIDAL 254
M+KNT + FR +D+D+ E F+++ ++A P+ + E+ L++ GR DA+
Sbjct: 1 MSKNTGDTKFRTVDVDRLTEPAFQDELTDEAKPSSLNISEINDLISSGRSTDAI 54
>UniRef50_UPI0001553929 Cluster: PREDICTED: hypothetical protein;
n=1; Mus musculus|Rep: PREDICTED: hypothetical protein -
Mus musculus
Length = 182
Score = 77.0 bits (181), Expect = 5e-13
Identities = 37/71 (52%), Positives = 50/71 (70%)
Frame = +2
Query: 293 QQVKENALTLTLKVLLAIKSAQIEEAVGSLSLDDIDNLMKYIYKGFEFPSEGSSGHLLLW 472
Q VK+ A + TL+V ++ K+ IE+AV SL + +D LMKYIYKGFE PS+ SS LL W
Sbjct: 27 QAVKDRAGSSTLEVFISFKANDIEKAVQSLDKNSVDFLMKYIYKGFESPSDNSSAVLLQW 86
Query: 473 HDKAYSVGGLG 505
H+KA + G +G
Sbjct: 87 HEKALAAGRVG 97
>UniRef50_Q5EN88 Cluster: Actin-related protein 2/3 complex subunit
5; n=2; Eumetazoa|Rep: Actin-related protein 2/3 complex
subunit 5 - Aurelia aurita (Moon jellyfish)
Length = 150
Score = 76.6 bits (180), Expect = 7e-13
Identities = 35/84 (41%), Positives = 52/84 (61%)
Frame = +2
Query: 254 QLVLNNAPLGSSNQQVKENALTLTLKVLLAIKSAQIEEAVGSLSLDDIDNLMKYIYKGFE 433
+L+L+ AP GS N+ K+ A L +VL K+++I A L++ + D LMKYIY+GF
Sbjct: 55 KLLLSQAPAGSKNKDRKDKAFELVTRVLTNYKASEITAAAKDLNIQETDMLMKYIYRGFA 114
Query: 434 FPSEGSSGHLLLWHDKAYSVGGLG 505
PS+ +L WH+K + GGLG
Sbjct: 115 EPSDSYCARILSWHEKVVANGGLG 138
Score = 53.6 bits (123), Expect = 6e-06
Identities = 21/54 (38%), Positives = 38/54 (70%)
Frame = +3
Query: 93 MAKNTLSSAFRKIDIDQYNEDNFKEDEAEQAGPTGPDEGEVCSLLNQGRHIDAL 254
M+K+ + FRK+D+D+++ED F++D+AE+ TGP E ++ LL ++ +AL
Sbjct: 1 MSKSANTREFRKVDVDKFDEDRFQDDQAEEEQDTGPSEADIQQLLMSKKNTEAL 54
>UniRef50_A3QX08 Cluster: Actin-related protein 2/3 complex subunit
5; n=6; Metazoa|Rep: Actin-related protein 2/3 complex
subunit 5 - Suberites domuncula (Sponge)
Length = 153
Score = 75.4 bits (177), Expect = 2e-12
Identities = 34/84 (40%), Positives = 52/84 (61%)
Frame = +2
Query: 254 QLVLNNAPLGSSNQQVKENALTLTLKVLLAIKSAQIEEAVGSLSLDDIDNLMKYIYKGFE 433
++ L + P+G ++ VK+ L VL KS+ +E++V SL + D LMKYIY+GF
Sbjct: 58 KVALKDPPVGVKDKSVKDRNFNTVLDVLTRFKSSDVEKSVNSLDEEQRDTLMKYIYRGFS 117
Query: 434 FPSEGSSGHLLLWHDKAYSVGGLG 505
P+E S G LL+WH+K + G+G
Sbjct: 118 EPTENSCGILLVWHEKNLAKSGVG 141
Score = 50.4 bits (115), Expect = 5e-05
Identities = 22/57 (38%), Positives = 39/57 (68%), Gaps = 3/57 (5%)
Frame = +3
Query: 93 MAKNTLSSAFRKIDIDQYNEDNFKEDEAEQAG---PTGPDEGEVCSLLNQGRHIDAL 254
M+KNT ++ FRK+DID+ +E+NF+++E + G E E+ SL+ G++++AL
Sbjct: 1 MSKNTRAADFRKVDIDELDEENFRDEETQDDGGQDQVSQRESEIKSLMTSGKNLEAL 57
>UniRef50_P91167 Cluster: Probable actin-related protein 2/3 complex
subunit 5; n=2; Caenorhabditis|Rep: Probable
actin-related protein 2/3 complex subunit 5 -
Caenorhabditis elegans
Length = 146
Score = 64.9 bits (151), Expect = 2e-09
Identities = 36/85 (42%), Positives = 50/85 (58%), Gaps = 1/85 (1%)
Frame = +2
Query: 254 QLVLNNAPLGSSNQQVKENALTLTLKVLLAIKSAQIEEAVGSLSLDDIDNLMKYIYKGFE 433
Q VL N P G S Q++K A+ L +V+ A + IEE+V LS ++ D LMKYIYK +
Sbjct: 50 QSVLLNPPFGHSEQELKNRAVLLVAEVIHAFRQTDIEESVHKLSNENGDILMKYIYKAMQ 109
Query: 434 FPSEGSSG-HLLLWHDKAYSVGGLG 505
S+ ++ LLLWH + S G G
Sbjct: 110 LCSDSATCLSLLLWHSQLVSKFGQG 134
>UniRef50_Q4PBX5 Cluster: Actin-related protein 2/3 complex subunit
5; n=1; Ustilago maydis|Rep: Actin-related protein 2/3
complex subunit 5 - Ustilago maydis (Smut fungus)
Length = 156
Score = 63.3 bits (147), Expect = 7e-09
Identities = 35/87 (40%), Positives = 50/87 (57%), Gaps = 3/87 (3%)
Frame = +2
Query: 257 LVLNNAPLGSSNQQVKENALTLTLKVLLAIKSAQIEEAVGSLSLDDIDNLMKYIYKGFEF 436
LVL++ P G + K L L+++ + KS+ I AV S+S+D D LMKY+YKG E
Sbjct: 59 LVLSDYPYGPEVEDAKHVTLQSLLEIVNSTKSSDISNAVKSISIDQRDALMKYLYKGLEL 118
Query: 437 --PSEGSSGHLLL-WHDKAYSVGGLGC 508
EG + +LL WH++ V G GC
Sbjct: 119 GGEREGINCAVLLGWHERLTEVAGTGC 145
>UniRef50_Q10316 Cluster: ARP2/3 complex 16 kDa subunit; n=1;
Schizosaccharomyces pombe|Rep: ARP2/3 complex 16 kDa
subunit - Schizosaccharomyces pombe (Fission yeast)
Length = 152
Score = 62.9 bits (146), Expect = 9e-09
Identities = 29/83 (34%), Positives = 47/83 (56%)
Frame = +2
Query: 260 VLNNAPLGSSNQQVKENALTLTLKVLLAIKSAQIEEAVGSLSLDDIDNLMKYIYKGFEFP 439
+L+ P G+ Q+V+ L + VL I++A I V S ++IDN++ +IY+G P
Sbjct: 59 LLSYVPYGNDVQEVRTQYLNAFVDVLSNIRAADIPAFVKECSTEEIDNIVNFIYRGLANP 118
Query: 440 SEGSSGHLLLWHDKAYSVGGLGC 508
+S LL WH+K + G+GC
Sbjct: 119 QAYNSSVLLNWHEKVVEISGIGC 141
>UniRef50_O61861 Cluster: Actin-related protein 2/3 complex subunit
5; n=2; Caenorhabditis|Rep: Actin-related protein 2/3
complex subunit 5 - Caenorhabditis elegans
Length = 152
Score = 60.1 bits (139), Expect = 7e-08
Identities = 33/88 (37%), Positives = 49/88 (55%), Gaps = 1/88 (1%)
Frame = +2
Query: 263 LNNAPLGSSNQQVKENALTLTLKVLLAIKSAQIEEAVGSLSLDDIDNLMKYIYKGFEFPS 442
L + PL + +Q VK+ A L KVL + K+A+IE V LS+++ D LMKY+YK E +
Sbjct: 59 LLSPPLKTKDQNVKDRATQLVTKVLQSFKNAEIEATVQKLSIEESDILMKYVYKSMEIGA 118
Query: 443 EGS-SGHLLLWHDKAYSVGGLGC*QEFF 523
+ + LL WH + + G G F
Sbjct: 119 DAAVCQSLLAWHAQLVAKFGHGAIMRVF 146
Score = 41.1 bits (92), Expect = 0.033
Identities = 20/55 (36%), Positives = 32/55 (58%), Gaps = 1/55 (1%)
Frame = +3
Query: 93 MAKNTLSSAFRKIDIDQYNEDNFKE-DEAEQAGPTGPDEGEVCSLLNQGRHIDAL 254
M+KN ++++RK+D+D ++ + + E DE GPDE V L+ R DAL
Sbjct: 1 MSKNMQNTSYRKLDVDSFDPEQYDENDETVDTPGLGPDERAVQGFLSSNRLEDAL 55
>UniRef50_Q6IPM3 Cluster: Actin-related protein 2/3 complex subunit
5; n=2; Catarrhini|Rep: Actin-related protein 2/3
complex subunit 5 - Homo sapiens (Human)
Length = 88
Score = 57.2 bits (132), Expect = 5e-07
Identities = 27/48 (56%), Positives = 36/48 (75%), Gaps = 1/48 (2%)
Frame = +3
Query: 93 MAKNTLSSA-FRKIDIDQYNEDNFKEDEAEQAGPTGPDEGEVCSLLNQ 233
M+KNT+SSA FRK+D+D+Y+E+ F ++E G GPDEGEV S L Q
Sbjct: 1 MSKNTVSSARFRKVDVDEYDENKFVDEEDGGDGQAGPDEGEVDSCLRQ 48
>UniRef50_UPI0000E4A8D0 Cluster: PREDICTED: similar to
CD40-associated protein, partial; n=6;
Strongylocentrotus purpuratus|Rep: PREDICTED: similar to
CD40-associated protein, partial - Strongylocentrotus
purpuratus
Length = 530
Score = 56.0 bits (129), Expect = 1e-06
Identities = 26/59 (44%), Positives = 38/59 (64%)
Frame = +2
Query: 305 ENALTLTLKVLLAIKSAQIEEAVGSLSLDDIDNLMKYIYKGFEFPSEGSSGHLLLWHDK 481
+ A L ++VL K++++ +AV SL + ID LMKYIY+ F PSE S+ L WH+K
Sbjct: 1 DKAHQLVIRVLTMFKASEVGDAVNSLDSNSIDILMKYIYREFAAPSEKSASVCLTWHEK 59
>UniRef50_Q6C6B4 Cluster: Actin-related protein 2/3 complex subunit
5; n=1; Yarrowia lipolytica|Rep: Actin-related protein
2/3 complex subunit 5 - Yarrowia lipolytica (Candida
lipolytica)
Length = 155
Score = 52.4 bits (120), Expect = 1e-05
Identities = 31/86 (36%), Positives = 48/86 (55%), Gaps = 3/86 (3%)
Frame = +2
Query: 257 LVLNNAPLGSSNQQVKENALTLTLKVLLAIKSAQIEEAVGSLSLDDIDNLMKYIYKGFEF 436
+ L+ AP G ++ VK+ L ++VL A KSA+I V +L+ + D L+KY+YK
Sbjct: 59 IALDFAPYGGDDK-VKDAHLKSVIEVLSATKSAEIPSVVKALNKEQQDVLIKYLYKAMGS 117
Query: 437 P---SEGSSGHLLLWHDKAYSVGGLG 505
P S+G LL W++K + G G
Sbjct: 118 PQGQSQGVGAILLAWYEKTVDITGQG 143
>UniRef50_Q5KPF0 Cluster: Actin-related protein 2/3 complex subunit
5; n=1; Filobasidiella neoformans|Rep: Actin-related
protein 2/3 complex subunit 5 - Cryptococcus neoformans
(Filobasidiella neoformans)
Length = 158
Score = 52.0 bits (119), Expect = 2e-05
Identities = 28/86 (32%), Positives = 42/86 (48%), Gaps = 3/86 (3%)
Frame = +2
Query: 260 VLNNAPLGSSNQQVKENALTLTLKVLLAIKSAQIEEAVGSLSLDDIDNLMKYIYKGFEFP 439
+L + P G + K + L +L + +SA I + +L D LM Y+YKG
Sbjct: 62 ILTDPPYGDGVDEAKSLTTSSLLLILNSTRSADIPTMIKNLDQVQQDRLMAYLYKGMAVL 121
Query: 440 SEG---SSGHLLLWHDKAYSVGGLGC 508
++G S LL WH+K V G+GC
Sbjct: 122 AQGGEVSGSVLLTWHEKLTEVAGVGC 147
>UniRef50_O96626 Cluster: Actin-related protein 2/3 complex subunit
5; n=2; Dictyostelium discoideum|Rep: Actin-related
protein 2/3 complex subunit 5 - Dictyostelium discoideum
(Slime mold)
Length = 138
Score = 46.8 bits (106), Expect = 7e-04
Identities = 24/83 (28%), Positives = 43/83 (51%)
Frame = +2
Query: 257 LVLNNAPLGSSNQQVKENALTLTLKVLLAIKSAQIEEAVGSLSLDDIDNLMKYIYKGFEF 436
+ L + P+ + +K+ T+ L +L + K +E +V +L+ D +D LMKY+Y+G
Sbjct: 46 VALADPPIYTKTGAIKDQNATIVLNLLGSFKDKDVETSVETLNDDQLDILMKYVYRG--L 103
Query: 437 PSEGSSGHLLLWHDKAYSVGGLG 505
+ +S WH+ GG G
Sbjct: 104 ATGENSPIFFKWHECVLKKGGAG 126
>UniRef50_P40518 Cluster: ARP2/3 complex 16 kDa subunit; n=6;
Saccharomycetales|Rep: ARP2/3 complex 16 kDa subunit -
Saccharomyces cerevisiae (Baker's yeast)
Length = 154
Score = 44.0 bits (99), Expect = 0.005
Identities = 25/82 (30%), Positives = 39/82 (47%), Gaps = 1/82 (1%)
Frame = +2
Query: 260 VLNNAPLGSSNQQVKENALTLTLKVLLAIKSAQIEEAVGSLSLDDIDNLMKYIYKGFEFP 439
+L P S++ KE L+ L ++ A I + +LS D L+KY+YKG P
Sbjct: 60 LLTTDPPYSADAPTKEQYFKSVLEALTQVRQADIGNVIKNLSDSQRDVLVKYLYKGMSVP 119
Query: 440 -SEGSSGHLLLWHDKAYSVGGL 502
+ G LL W ++ V G+
Sbjct: 120 QGQKQGGVLLAWLERITQVSGV 141
>UniRef50_Q2GV37 Cluster: Actin-related protein 2/3 complex subunit
5; n=8; Pezizomycotina|Rep: Actin-related protein 2/3
complex subunit 5 - Chaetomium globosum (Soil fungus)
Length = 208
Score = 31.5 bits (68), Expect(2) = 0.050
Identities = 20/67 (29%), Positives = 34/67 (50%), Gaps = 5/67 (7%)
Frame = +2
Query: 272 APLGSSNQQVKENALTLTLKVLLAIKSAQIEEAVGSL-----SLDDIDNLMKYIYKGFEF 436
+P + +E AL ++VL +IK++ + + + + +D LMKY+YKG
Sbjct: 79 SPAYGAVDAAREAALQTVIEVLQSIKASDMTPMLQRVYASPGGSECLDVLMKYLYKGMAA 138
Query: 437 PSEGSSG 457
S SSG
Sbjct: 139 TSSASSG 145
Score = 28.3 bits (60), Expect(2) = 0.050
Identities = 10/16 (62%), Positives = 11/16 (68%)
Frame = +2
Query: 461 LLLWHDKAYSVGGLGC 508
LL WH+K V GLGC
Sbjct: 182 LLSWHEKVVEVAGLGC 197
>UniRef50_Q9M117 Cluster: Actin-related protein 2/3 complex subunit
5; n=11; Magnoliophyta|Rep: Actin-related protein 2/3
complex subunit 5 - Arabidopsis thaliana (Mouse-ear
cress)
Length = 159
Score = 39.5 bits (88), Expect = 0.099
Identities = 23/82 (28%), Positives = 40/82 (48%)
Frame = +2
Query: 263 LNNAPLGSSNQQVKENALTLTLKVLLAIKSAQIEEAVGSLSLDDIDNLMKYIYKGFEFPS 442
L +P + +++ K + + L+AIK I+ + +L ++ D LMKY+Y+G
Sbjct: 68 LEGSPPKTRDERCKSANWIVVHRALMAIKD--IDGMLNALDVEYYDILMKYLYRGLSTGD 125
Query: 443 EGSSGHLLLWHDKAYSVGGLGC 508
+ L H+K GLGC
Sbjct: 126 RPTCDQCLKIHEKLTERAGLGC 147
>UniRef50_Q22T15 Cluster: Putative uncharacterized protein; n=1;
Tetrahymena thermophila SB210|Rep: Putative
uncharacterized protein - Tetrahymena thermophila SB210
Length = 1145
Score = 38.3 bits (85), Expect = 0.23
Identities = 23/65 (35%), Positives = 34/65 (52%)
Frame = +2
Query: 254 QLVLNNAPLGSSNQQVKENALTLTLKVLLAIKSAQIEEAVGSLSLDDIDNLMKYIYKGFE 433
++V++N P+ S NQ+ E + L VL A K + V +L+ + NL YI K FE
Sbjct: 1028 KIVIDNPPVKSKNQETLEKYVALFHSVLSAAKDRE-RSIVDALNDQEAVNLYDYINKSFE 1086
Query: 434 FPSEG 448
S G
Sbjct: 1087 LISSG 1091
>UniRef50_A2F412 Cluster: Actin-related protein 2/3 complex subunit
5; n=2; Trichomonas vaginalis G3|Rep: Actin-related
protein 2/3 complex subunit 5 - Trichomonas vaginalis G3
Length = 135
Score = 38.3 bits (85), Expect = 0.23
Identities = 19/71 (26%), Positives = 39/71 (54%)
Frame = +2
Query: 293 QQVKENALTLTLKVLLAIKSAQIEEAVGSLSLDDIDNLMKYIYKGFEFPSEGSSGHLLLW 472
+ K+ A L ++ +I+ +++ + L+ ++ D LMK++Y+GF+ E +LL
Sbjct: 55 KDAKDAAAKSVLTIVTSIEKSKLAATIKGLTDEERDTLMKFVYRGFQ--EEYDHMYLLTI 112
Query: 473 HDKAYSVGGLG 505
H++ V LG
Sbjct: 113 HEEICKVSNLG 123
>UniRef50_Q7NNZ9 Cluster: Gll0259 protein; n=1; Gloeobacter
violaceus|Rep: Gll0259 protein - Gloeobacter violaceus
Length = 184
Score = 36.7 bits (81), Expect = 0.70
Identities = 17/53 (32%), Positives = 32/53 (60%)
Frame = +2
Query: 263 LNNAPLGSSNQQVKENALTLTLKVLLAIKSAQIEEAVGSLSLDDIDNLMKYIY 421
+N A +GS +Q++E L + A++SAQ+E AVG + ++D+ + +Y
Sbjct: 10 VNEANIGSDLEQLQETDQPLRSEAPEAVRSAQLEHAVGQFNALEVDDKLAVLY 62
>UniRef50_Q1E112 Cluster: Actin-related protein 2/3 complex subunit
5; n=6; Eurotiomycetidae|Rep: Actin-related protein 2/3
complex subunit 5 - Coccidioides immitis
Length = 195
Score = 33.9 bits (74), Expect = 4.9
Identities = 22/67 (32%), Positives = 36/67 (53%), Gaps = 5/67 (7%)
Frame = +2
Query: 263 LNNAPLGSSNQQVKENALTLTLKVLLAIKSAQIEEAV-----GSLSLDDIDNLMKYIYKG 427
L+ APLG ++ KE L ++VL +I+ A++ + G ++ D LMKY+Y+G
Sbjct: 65 LDTAPLGGDDR-AKEVHLATVVEVLQSIRQAEMARVLEGVCSGEGGVERGDCLMKYLYRG 123
Query: 428 FEFPSEG 448
S G
Sbjct: 124 MASQSSG 130
>UniRef50_Q26I63 Cluster: Putative uncharacterized protein; n=1;
Flavobacteria bacterium BBFL7|Rep: Putative
uncharacterized protein - Flavobacteria bacterium BBFL7
Length = 616
Score = 33.5 bits (73), Expect = 6.5
Identities = 16/48 (33%), Positives = 25/48 (52%), Gaps = 4/48 (8%)
Frame = +2
Query: 578 ETFILNFKEC----WFNFFICLQNDSWFSASKFYLLLNCVVKWLIKFI 709
E F++N C W + + L+N SW ++YL+L+ V I FI
Sbjct: 2 EHFLINSTACLLILWLFYKLLLENTSWHKWKRYYLILSIVTALAIPFI 49
>UniRef50_A3M4C7 Cluster: PaaC; n=1; Acinetobacter baumannii ATCC
17978|Rep: PaaC - Acinetobacter baumannii (strain ATCC
17978 / NCDC KC 755)
Length = 435
Score = 33.5 bits (73), Expect = 6.5
Identities = 18/49 (36%), Positives = 28/49 (57%), Gaps = 1/49 (2%)
Frame = +2
Query: 272 APLGSSNQQVKENALTLTLKVLLAIKSAQIEEAV-GSLSLDDIDNLMKY 415
A G S +K++ LTL+ + + + E ++ G SL+DIDN MKY
Sbjct: 323 AQFGMSVMWIKDHPALLTLRTIALLINEACEASLHGVASLEDIDNAMKY 371
>UniRef50_A2DSM4 Cluster: Putative uncharacterized protein; n=2;
Trichomonas vaginalis G3|Rep: Putative uncharacterized
protein - Trichomonas vaginalis G3
Length = 499
Score = 33.5 bits (73), Expect = 6.5
Identities = 23/64 (35%), Positives = 32/64 (50%), Gaps = 3/64 (4%)
Frame = -1
Query: 753 FGYHFNEQG*YFKCYINFINHLTTQLSNK*N-LDALNHESFCKQIKKLNQHSL--KFRIK 583
F F + YF +IN IN + QL + + LD++ H + KLNQ SL F I
Sbjct: 165 FSDEFTKSFSYFNEFINNINEIKDQLVHYGHPLDSIQHAIATDDVDKLNQFSLAPNFNIN 224
Query: 582 VSLI 571
+ LI
Sbjct: 225 MKLI 228
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 725,026,387
Number of Sequences: 1657284
Number of extensions: 13283254
Number of successful extensions: 28741
Number of sequences better than 10.0: 27
Number of HSP's better than 10.0 without gapping: 27807
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 28726
length of database: 575,637,011
effective HSP length: 100
effective length of database: 409,908,611
effective search space used: 70914189703
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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