Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= br--1475
         (822 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ000038-1|CAA03874.1|   73|Anopheles gambiae F1 protein protein.      24   4.9  
Y17717-1|CAA76832.1|  101|Anopheles gambiae cE5 protein protein.       23   8.6  
U29486-1|AAC46995.1|  695|Anopheles gambiae ATP-binding-cassette...    23   8.6  
U29485-1|AAC46994.1|  695|Anopheles gambiae ATP-binding-cassette...    23   8.6  
U29484-1|AAC47423.1|  673|Anopheles gambiae ATP-binding-cassette...    23   8.6  

>AJ000038-1|CAA03874.1|   73|Anopheles gambiae F1 protein protein.
          Length = 73

 Score = 24.2 bits (50), Expect = 4.9
 Identities = 8/27 (29%), Positives = 16/27 (59%)
 Frame = +3

Query: 132 DIDQYNEDNFKEDEAEQAGPTGPDEGE 212
           D+  Y+E++F E+  +    +  D+GE
Sbjct: 29  DVPTYDEEDFDEESLKPHSSSSSDDGE 55


>Y17717-1|CAA76832.1|  101|Anopheles gambiae cE5 protein protein.
          Length = 101

 Score = 23.4 bits (48), Expect = 8.6
 Identities = 8/27 (29%), Positives = 16/27 (59%)
 Frame = +3

Query: 132 DIDQYNEDNFKEDEAEQAGPTGPDEGE 212
           D+  Y+E++F E+  +    +  D+GE
Sbjct: 29  DVPTYDEEDFDEESLKPHSSSPSDDGE 55


>U29486-1|AAC46995.1|  695|Anopheles gambiae ATP-binding-cassette
           protein protein.
          Length = 695

 Score = 23.4 bits (48), Expect = 8.6
 Identities = 10/40 (25%), Positives = 17/40 (42%)
 Frame = +2

Query: 557 YTAQPINETFILNFKECWFNFFICLQNDSWFSASKFYLLL 676
           Y  Q +       ++  W+  F C+   SW S  K  +L+
Sbjct: 401 YMLQQVEGVGSTGYRSSWWTQFYCILWRSWLSVLKDPMLV 440


>U29485-1|AAC46994.1|  695|Anopheles gambiae ATP-binding-cassette
           protein protein.
          Length = 695

 Score = 23.4 bits (48), Expect = 8.6
 Identities = 10/40 (25%), Positives = 17/40 (42%)
 Frame = +2

Query: 557 YTAQPINETFILNFKECWFNFFICLQNDSWFSASKFYLLL 676
           Y  Q +       ++  W+  F C+   SW S  K  +L+
Sbjct: 401 YMLQQVEGVGSTGYRSSWWTQFYCILWRSWLSVLKDPMLV 440


>U29484-1|AAC47423.1|  673|Anopheles gambiae ATP-binding-cassette
           protein protein.
          Length = 673

 Score = 23.4 bits (48), Expect = 8.6
 Identities = 10/40 (25%), Positives = 17/40 (42%)
 Frame = +2

Query: 557 YTAQPINETFILNFKECWFNFFICLQNDSWFSASKFYLLL 676
           Y  Q +       ++  W+  F C+   SW S  K  +L+
Sbjct: 379 YMLQQVEGVGSTGYRSSWWTQFYCILWRSWLSVLKDPMLV 418


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 791,273
Number of Sequences: 2352
Number of extensions: 14520
Number of successful extensions: 12
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 87318630
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)