Bombyx BLAST Result against arabidopsis

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= br--1474
         (784 letters)

Database: arabidopsis 
           28,952 sequences; 12,070,560 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

At1g63370.1 68414.m07164 flavin-containing monooxygenase family ...    30   2.0  
At1g62600.1 68414.m07062 flavin-containing monooxygenase family ...    28   8.0  

>At1g63370.1 68414.m07164 flavin-containing monooxygenase family
           protein / FMO family protein similar to FMO5 from Cavia
           porcellus [SP|P49109]; contains Pfam profile: PF00743
           Flavin-binding monooxygenase-like
          Length = 450

 Score = 29.9 bits (64), Expect = 2.0
 Identities = 14/37 (37%), Positives = 19/37 (51%), Gaps = 1/37 (2%)
 Frame = -3

Query: 215 LRTLTCTCNVPVI-RTYTTRQSGINFDLDKWLWTQCG 108
           ++T   T  V  I + YT R     F+ D WL +QCG
Sbjct: 367 IKTFYSTLEVQGIPKRYTHRMGNTQFEYDNWLASQCG 403


>At1g62600.1 68414.m07062 flavin-containing monooxygenase family
           protein / FMO family protein low similarity to
           flavin-containing monooxygenase 2 from Cavia porcellus
           [SP|P36366]; contains Pfam profile PF00743
           Flavin-binding monooxygenase-like
          Length = 452

 Score = 27.9 bits (59), Expect = 8.0
 Identities = 14/37 (37%), Positives = 21/37 (56%), Gaps = 1/37 (2%)
 Frame = -3

Query: 215 LRTLTCTCNVPVIRTYTTRQSGIN-FDLDKWLWTQCG 108
           ++TL  T +   I    T Q GI+ F+ + WL +QCG
Sbjct: 369 IKTLYSTLDAQGIAKRYTHQMGISQFEYNSWLASQCG 405


  Database: arabidopsis
    Posted date:  Oct 4, 2007 10:56 AM
  Number of letters in database: 12,070,560
  Number of sequences in database:  28,952
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,283,197
Number of Sequences: 28952
Number of extensions: 397744
Number of successful extensions: 805
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 772
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 805
length of database: 12,070,560
effective HSP length: 80
effective length of database: 9,754,400
effective search space used: 1755792000
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)