Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= br--1473
         (732 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ659248-1|ABG47446.1|  496|Tribolium castaneum chitinase 8 prot...    24   1.1  
AM292365-1|CAL23177.1|  313|Tribolium castaneum gustatory recept...    22   4.4  
AM292325-1|CAL23137.2|  309|Tribolium castaneum gustatory recept...    22   4.4  
AM292370-1|CAL23182.1|  418|Tribolium castaneum gustatory recept...    21   7.8  
AM292335-1|CAL23147.2|  374|Tribolium castaneum gustatory recept...    21   7.8  
AJ606487-1|CAE55183.1|  203|Tribolium castaneum Giant protein pr...    21   7.8  

>DQ659248-1|ABG47446.1|  496|Tribolium castaneum chitinase 8
           protein.
          Length = 496

 Score = 24.2 bits (50), Expect = 1.1
 Identities = 6/14 (42%), Positives = 9/14 (64%)
 Frame = -2

Query: 638 KICCFWGYWGRLRY 597
           K+ C+WG W   R+
Sbjct: 25  KVVCYWGTWSTYRW 38


>AM292365-1|CAL23177.1|  313|Tribolium castaneum gustatory receptor
           candidate 44 protein.
          Length = 313

 Score = 22.2 bits (45), Expect = 4.4
 Identities = 7/23 (30%), Positives = 13/23 (56%)
 Frame = -2

Query: 431 YQCSVILLFGKYLYYQLHVVFYF 363
           ++  V+ +FG   Y+ +   FYF
Sbjct: 227 FEVQVLTIFGVSFYFFISTFFYF 249


>AM292325-1|CAL23137.2|  309|Tribolium castaneum gustatory receptor
           candidate 4 protein.
          Length = 309

 Score = 22.2 bits (45), Expect = 4.4
 Identities = 7/23 (30%), Positives = 13/23 (56%)
 Frame = -2

Query: 431 YQCSVILLFGKYLYYQLHVVFYF 363
           ++  V+ +FG   Y+ +   FYF
Sbjct: 223 FEVQVLTIFGVSFYFFISTFFYF 245


>AM292370-1|CAL23182.1|  418|Tribolium castaneum gustatory receptor
           candidate 49 protein.
          Length = 418

 Score = 21.4 bits (43), Expect = 7.8
 Identities = 7/14 (50%), Positives = 10/14 (71%)
 Frame = +3

Query: 636 FYMYFYFIKNIKTT 677
           FY YF+++  I TT
Sbjct: 84  FYSYFFYLSYIYTT 97


>AM292335-1|CAL23147.2|  374|Tribolium castaneum gustatory receptor
           candidate 14 protein.
          Length = 374

 Score = 21.4 bits (43), Expect = 7.8
 Identities = 7/14 (50%), Positives = 10/14 (71%)
 Frame = +3

Query: 636 FYMYFYFIKNIKTT 677
           FY YF+++  I TT
Sbjct: 40  FYSYFFYLSYIYTT 53


>AJ606487-1|CAE55183.1|  203|Tribolium castaneum Giant protein
           protein.
          Length = 203

 Score = 21.4 bits (43), Expect = 7.8
 Identities = 8/13 (61%), Positives = 9/13 (69%)
 Frame = -1

Query: 207 TCNKNDETSRWTK 169
           T NKND+ S W K
Sbjct: 129 TQNKNDDPSYWEK 141


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 176,206
Number of Sequences: 336
Number of extensions: 4238
Number of successful extensions: 10
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 19571740
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)