Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= br--1473
         (732 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC054857-1|AAH54857.1|  149|Homo sapiens DC2 protein protein.          30   7.4  
BC016321-1|AAH16321.1|  149|Homo sapiens DC2 protein protein.          30   7.4  
AF343342-1|AAK69656.1|  149|Homo sapiens hydrophobic protein HSF...    30   7.4  
AF201937-1|AAF86873.1|  149|Homo sapiens DC2 protein.                  30   7.4  

>BC054857-1|AAH54857.1|  149|Homo sapiens DC2 protein protein.
          Length = 149

 Score = 30.3 bits (65), Expect = 7.4
 Identities = 14/32 (43%), Positives = 20/32 (62%)
 Frame = +2

Query: 557 FHFTYSHPFFVVICT*DVPNIPKNNRFLHVFL 652
           F FT     F+++   + PNIPK NRFL +F+
Sbjct: 92  FLFTMGGLGFIILDRSNAPNIPKLNRFLLLFI 123


>BC016321-1|AAH16321.1|  149|Homo sapiens DC2 protein protein.
          Length = 149

 Score = 30.3 bits (65), Expect = 7.4
 Identities = 14/32 (43%), Positives = 20/32 (62%)
 Frame = +2

Query: 557 FHFTYSHPFFVVICT*DVPNIPKNNRFLHVFL 652
           F FT     F+++   + PNIPK NRFL +F+
Sbjct: 92  FLFTMGGLGFIILDRSNAPNIPKLNRFLLLFI 123


>AF343342-1|AAK69656.1|  149|Homo sapiens hydrophobic protein HSF-28
           protein.
          Length = 149

 Score = 30.3 bits (65), Expect = 7.4
 Identities = 14/32 (43%), Positives = 20/32 (62%)
 Frame = +2

Query: 557 FHFTYSHPFFVVICT*DVPNIPKNNRFLHVFL 652
           F FT     F+++   + PNIPK NRFL +F+
Sbjct: 92  FLFTMGGLGFIILDRSNAPNIPKLNRFLLLFI 123


>AF201937-1|AAF86873.1|  149|Homo sapiens DC2 protein.
          Length = 149

 Score = 30.3 bits (65), Expect = 7.4
 Identities = 14/32 (43%), Positives = 20/32 (62%)
 Frame = +2

Query: 557 FHFTYSHPFFVVICT*DVPNIPKNNRFLHVFL 652
           F FT     F+++   + PNIPK NRFL +F+
Sbjct: 92  FLFTMGGLGFIILDRSNAPNIPKLNRFLLLFI 123


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 96,599,922
Number of Sequences: 237096
Number of extensions: 1983507
Number of successful extensions: 2626
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 2568
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2626
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 8679165170
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)