Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= br--1472
         (771 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY127579-1|AAN02286.1|  405|Apis mellifera venom protease precur...    24   1.4  
AY500239-1|AAR92109.1|  555|Apis mellifera neuronal nicotinic ac...    23   3.1  
DQ232888-1|ABB36783.1|  499|Apis mellifera cytochrome P450 monoo...    22   7.3  
DQ067178-1|AAZ20250.1|  448|Apis mellifera conserved ATPase doma...    21   9.6  

>AY127579-1|AAN02286.1|  405|Apis mellifera venom protease precursor
           protein.
          Length = 405

 Score = 24.2 bits (50), Expect = 1.4
 Identities = 8/18 (44%), Positives = 11/18 (61%)
 Frame = +2

Query: 206 HCLIDNKNCNIHIVVSDH 259
           HC+ID     + IVV +H
Sbjct: 203 HCIIDENTTKLAIVVGEH 220


>AY500239-1|AAR92109.1|  555|Apis mellifera neuronal nicotinic
           acetylcholine receptoralpha7-1 protein.
          Length = 555

 Score = 23.0 bits (47), Expect = 3.1
 Identities = 8/17 (47%), Positives = 11/17 (64%)
 Frame = -3

Query: 769 PLKKNGVYFNFCMTAYI 719
           P K+N +Y+N C   YI
Sbjct: 203 PGKRNEIYYNCCPEPYI 219


>DQ232888-1|ABB36783.1|  499|Apis mellifera cytochrome P450
           monooxygenase protein.
          Length = 499

 Score = 21.8 bits (44), Expect = 7.3
 Identities = 10/33 (30%), Positives = 17/33 (51%)
 Frame = +1

Query: 64  LKY*NFKLLSFLDKYLLQNLKSMEQIFLRFRKS 162
           LKY + K + +LDK   + L+      +  RK+
Sbjct: 345 LKYDDIKEMEYLDKVFKETLRMYPPASILMRKA 377


>DQ067178-1|AAZ20250.1|  448|Apis mellifera conserved ATPase domain
           protein protein.
          Length = 448

 Score = 21.4 bits (43), Expect = 9.6
 Identities = 7/15 (46%), Positives = 10/15 (66%)
 Frame = -3

Query: 133 PLTLNFVISTYQGTI 89
           P T N++  TY GT+
Sbjct: 356 PATTNYLYLTYNGTV 370


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 209,115
Number of Sequences: 438
Number of extensions: 4692
Number of successful extensions: 11
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 24154023
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)