Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= br--1466
         (734 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ863218-1|ABI94394.1|  399|Apis mellifera tyramine receptor pro...    22   5.2  
DQ863217-1|ABI94393.1|  399|Apis mellifera tyramine receptor pro...    22   5.2  
AY661557-1|AAT74557.1|  411|Apis mellifera yellow-f-like protein...    22   5.2  
AJ245824-1|CAB76374.1|  399|Apis mellifera G-protein coupled rec...    22   5.2  
AF023666-1|AAC14552.1|  363|Apis mellifera sn-glycerol-3-phospha...    22   5.2  
DQ257415-1|ABB81846.1|  430|Apis mellifera yellow-like protein p...    22   6.9  
Z26318-1|CAA81227.1|  544|Apis mellifera royal jelly protein RJP...    21   9.1  

>DQ863218-1|ABI94394.1|  399|Apis mellifera tyramine receptor
           protein.
          Length = 399

 Score = 22.2 bits (45), Expect = 5.2
 Identities = 12/25 (48%), Positives = 16/25 (64%)
 Frame = -2

Query: 271 YTIVPIRNSDIFQDFLIISLAQTDL 197
           +T  P+R   I Q+F I+SLA  DL
Sbjct: 62  FTYRPLR---IVQNFFIVSLAVADL 83


>DQ863217-1|ABI94393.1|  399|Apis mellifera tyramine receptor
           protein.
          Length = 399

 Score = 22.2 bits (45), Expect = 5.2
 Identities = 12/25 (48%), Positives = 16/25 (64%)
 Frame = -2

Query: 271 YTIVPIRNSDIFQDFLIISLAQTDL 197
           +T  P+R   I Q+F I+SLA  DL
Sbjct: 62  FTYRPLR---IVQNFFIVSLAVADL 83


>AY661557-1|AAT74557.1|  411|Apis mellifera yellow-f-like protein
           protein.
          Length = 411

 Score = 22.2 bits (45), Expect = 5.2
 Identities = 9/18 (50%), Positives = 11/18 (61%)
 Frame = +2

Query: 221 NQKILENVGIPNWYNGVP 274
           N K+   + IP W NGVP
Sbjct: 60  NDKVF--ITIPRWKNGVP 75


>AJ245824-1|CAB76374.1|  399|Apis mellifera G-protein coupled
           receptor protein.
          Length = 399

 Score = 22.2 bits (45), Expect = 5.2
 Identities = 12/25 (48%), Positives = 16/25 (64%)
 Frame = -2

Query: 271 YTIVPIRNSDIFQDFLIISLAQTDL 197
           +T  P+R   I Q+F I+SLA  DL
Sbjct: 62  FTYRPLR---IVQNFFIVSLAVADL 83


>AF023666-1|AAC14552.1|  363|Apis mellifera sn-glycerol-3-phosphate
           dehydrogenase protein.
          Length = 363

 Score = 22.2 bits (45), Expect = 5.2
 Identities = 10/32 (31%), Positives = 18/32 (56%)
 Frame = +1

Query: 139 KKINENSEKPIFMTLYCVIINQFVPTK*SENL 234
           K  N  +  P+F T++ + I + +P +  ENL
Sbjct: 312 KAKNMENRFPLFTTVHRICIGETMPMELIENL 343


>DQ257415-1|ABB81846.1|  430|Apis mellifera yellow-like protein
           protein.
          Length = 430

 Score = 21.8 bits (44), Expect = 6.9
 Identities = 7/16 (43%), Positives = 9/16 (56%)
 Frame = +2

Query: 242 VGIPNWYNGVPFFTRY 289
           V +P W NG+P    Y
Sbjct: 81  VTVPRWRNGIPATLTY 96


>Z26318-1|CAA81227.1|  544|Apis mellifera royal jelly protein
           RJP57-1 protein.
          Length = 544

 Score = 21.4 bits (43), Expect = 9.1
 Identities = 7/10 (70%), Positives = 9/10 (90%)
 Frame = +2

Query: 5   NPFNFSDLNF 34
           N FNF+D+NF
Sbjct: 394 NDFNFNDVNF 403


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 217,557
Number of Sequences: 438
Number of extensions: 5378
Number of successful extensions: 11
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 22901220
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)