Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= br--1465
(690 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
M29491-1|AAA27726.1| 79|Apis mellifera protein ( Bee homeobox-... 25 0.51
AY661557-1|AAT74557.1| 411|Apis mellifera yellow-f-like protein... 24 1.2
DQ325101-1|ABD14115.1| 182|Apis mellifera complementary sex det... 23 3.6
DQ325102-1|ABD14116.1| 183|Apis mellifera complementary sex det... 22 4.8
DQ325100-1|ABD14114.1| 183|Apis mellifera complementary sex det... 22 4.8
DQ325099-1|ABD14113.1| 183|Apis mellifera complementary sex det... 22 4.8
DQ325098-1|ABD14112.1| 183|Apis mellifera complementary sex det... 22 4.8
DQ325097-1|ABD14111.1| 183|Apis mellifera complementary sex det... 22 4.8
DQ325096-1|ABD14110.1| 183|Apis mellifera complementary sex det... 22 4.8
DQ325095-1|ABD14109.1| 183|Apis mellifera complementary sex det... 22 4.8
AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein. 22 6.3
D79208-1|BAA11466.1| 567|Apis mellifera alpha-glucosidase protein. 21 8.4
AY336529-1|AAQ02340.1| 712|Apis mellifera transferrin protein. 21 8.4
AY336528-1|AAQ02339.1| 712|Apis mellifera transferrin protein. 21 8.4
AY217097-1|AAO39761.1| 712|Apis mellifera transferrin protein. 21 8.4
AF393496-1|AAL60421.1| 146|Apis mellifera odorant binding prote... 21 8.4
AF339140-1|AAK01304.1| 120|Apis mellifera odorant binding prote... 21 8.4
AB253417-1|BAE86928.1| 567|Apis mellifera alpha-glucosidase pro... 21 8.4
>M29491-1|AAA27726.1| 79|Apis mellifera protein ( Bee
homeobox-containing gene,partial cds, clone H17. ).
Length = 79
Score = 25.4 bits (53), Expect = 0.51
Identities = 16/49 (32%), Positives = 24/49 (48%)
Frame = +1
Query: 223 RHMPRDPSRNPFTTREDLITLIVITTIQPKIIHAERITITLELRLPRTQ 369
+H P R PFTT++ L++L + + AER + L L TQ
Sbjct: 5 KHKPNRKPRTPFTTQQ-LLSLEKKFREKQYLTIAERAEFSSSLHLTETQ 52
>AY661557-1|AAT74557.1| 411|Apis mellifera yellow-f-like protein
protein.
Length = 411
Score = 24.2 bits (50), Expect = 1.2
Identities = 10/38 (26%), Positives = 20/38 (52%)
Frame = +1
Query: 415 TQDQTIRSFLGKITLSRTTLDQIILSDHTIQKNYHYYS 528
T I F +++ ++ +L DHT++K+ YY+
Sbjct: 249 TDGYKILYFHAMSSIAEFSVSTEVLQDHTLEKSNDYYA 286
>DQ325101-1|ABD14115.1| 182|Apis mellifera complementary sex
determiner protein.
Length = 182
Score = 22.6 bits (46), Expect = 3.6
Identities = 11/39 (28%), Positives = 20/39 (51%)
Frame = +2
Query: 287 SSLPQYNRRSSTQNELQLPSN*DYHARNNLPPPIPL*TG 403
S+ YN ++ N +L N +Y + +P P+P+ G
Sbjct: 92 SNYNNYNNNNNYNNYKKLYYNINYIEQIPIPVPVPIYCG 130
>DQ325102-1|ABD14116.1| 183|Apis mellifera complementary sex
determiner protein.
Length = 183
Score = 22.2 bits (45), Expect = 4.8
Identities = 11/39 (28%), Positives = 20/39 (51%)
Frame = +2
Query: 287 SSLPQYNRRSSTQNELQLPSN*DYHARNNLPPPIPL*TG 403
S+ YN ++ N +L N +Y + +P P+P+ G
Sbjct: 92 SNYNNYNNNNNYNNYKKLYYNINYIEQIPVPVPVPIYCG 130
>DQ325100-1|ABD14114.1| 183|Apis mellifera complementary sex
determiner protein.
Length = 183
Score = 22.2 bits (45), Expect = 4.8
Identities = 11/39 (28%), Positives = 20/39 (51%)
Frame = +2
Query: 287 SSLPQYNRRSSTQNELQLPSN*DYHARNNLPPPIPL*TG 403
S+ YN ++ N +L N +Y + +P P+P+ G
Sbjct: 92 SNYNNYNNNNNYNNYKKLYYNINYIEQIPVPVPVPIYCG 130
>DQ325099-1|ABD14113.1| 183|Apis mellifera complementary sex
determiner protein.
Length = 183
Score = 22.2 bits (45), Expect = 4.8
Identities = 11/39 (28%), Positives = 20/39 (51%)
Frame = +2
Query: 287 SSLPQYNRRSSTQNELQLPSN*DYHARNNLPPPIPL*TG 403
S+ YN ++ N +L N +Y + +P P+P+ G
Sbjct: 92 SNYNNYNNNNNYNNYKKLYYNINYIEQIPVPVPVPIYCG 130
>DQ325098-1|ABD14112.1| 183|Apis mellifera complementary sex
determiner protein.
Length = 183
Score = 22.2 bits (45), Expect = 4.8
Identities = 11/39 (28%), Positives = 20/39 (51%)
Frame = +2
Query: 287 SSLPQYNRRSSTQNELQLPSN*DYHARNNLPPPIPL*TG 403
S+ YN ++ N +L N +Y + +P P+P+ G
Sbjct: 92 SNYNNYNNNNNYNNYKKLYYNINYIEQIPVPVPVPIYCG 130
>DQ325097-1|ABD14111.1| 183|Apis mellifera complementary sex
determiner protein.
Length = 183
Score = 22.2 bits (45), Expect = 4.8
Identities = 11/39 (28%), Positives = 20/39 (51%)
Frame = +2
Query: 287 SSLPQYNRRSSTQNELQLPSN*DYHARNNLPPPIPL*TG 403
S+ YN ++ N +L N +Y + +P P+P+ G
Sbjct: 92 SNYNNYNNNNNYNNYKKLYYNINYIEQIPVPVPVPIYCG 130
>DQ325096-1|ABD14110.1| 183|Apis mellifera complementary sex
determiner protein.
Length = 183
Score = 22.2 bits (45), Expect = 4.8
Identities = 11/39 (28%), Positives = 20/39 (51%)
Frame = +2
Query: 287 SSLPQYNRRSSTQNELQLPSN*DYHARNNLPPPIPL*TG 403
S+ YN ++ N +L N +Y + +P P+P+ G
Sbjct: 92 SNYNNYNNNNNYNNYKKLYYNINYIEQIPVPVPVPIYCG 130
>DQ325095-1|ABD14109.1| 183|Apis mellifera complementary sex
determiner protein.
Length = 183
Score = 22.2 bits (45), Expect = 4.8
Identities = 11/39 (28%), Positives = 20/39 (51%)
Frame = +2
Query: 287 SSLPQYNRRSSTQNELQLPSN*DYHARNNLPPPIPL*TG 403
S+ YN ++ N +L N +Y + +P P+P+ G
Sbjct: 92 SNYNNYNNNNNYNNYKKLYYNINYIEQIPVPVPVPIYCG 130
>AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.
Length = 1946
Score = 21.8 bits (44), Expect = 6.3
Identities = 14/52 (26%), Positives = 23/52 (44%), Gaps = 3/52 (5%)
Frame = -1
Query: 330 SFCVDDLRLYCGNDDQGNKVFSGSKRVSRWITGHVSELHDVYYG---GYKAF 184
SF D +++ + DQG + G +++ ELH G GYK +
Sbjct: 128 SFVADFVKVLSWHTDQGEEFVPGDDYDGKYLVLPSGELHIRDVGPEDGYKTY 179
>D79208-1|BAA11466.1| 567|Apis mellifera alpha-glucosidase protein.
Length = 567
Score = 21.4 bits (43), Expect = 8.4
Identities = 7/13 (53%), Positives = 10/13 (76%)
Frame = +1
Query: 220 FRHMPRDPSRNPF 258
++ M RDP+R PF
Sbjct: 408 YQTMSRDPARTPF 420
>AY336529-1|AAQ02340.1| 712|Apis mellifera transferrin protein.
Length = 712
Score = 21.4 bits (43), Expect = 8.4
Identities = 11/38 (28%), Positives = 17/38 (44%)
Frame = -2
Query: 461 LRVILPRNDRIVWSWVAGILRFIGVSGAVSYCVRGSLN 348
LR + I W+ V + RF G+ V+ + S N
Sbjct: 241 LRCLAHNGGEIAWTKVIYVKRFFGLPVGVTAAIPTSEN 278
>AY336528-1|AAQ02339.1| 712|Apis mellifera transferrin protein.
Length = 712
Score = 21.4 bits (43), Expect = 8.4
Identities = 11/38 (28%), Positives = 17/38 (44%)
Frame = -2
Query: 461 LRVILPRNDRIVWSWVAGILRFIGVSGAVSYCVRGSLN 348
LR + I W+ V + RF G+ V+ + S N
Sbjct: 241 LRCLAHNGGEIAWTKVIYVKRFFGLPVGVTAAIPTSEN 278
>AY217097-1|AAO39761.1| 712|Apis mellifera transferrin protein.
Length = 712
Score = 21.4 bits (43), Expect = 8.4
Identities = 11/38 (28%), Positives = 17/38 (44%)
Frame = -2
Query: 461 LRVILPRNDRIVWSWVAGILRFIGVSGAVSYCVRGSLN 348
LR + I W+ V + RF G+ V+ + S N
Sbjct: 241 LRCLAHNGGEIAWTKVIYVKRFFGLPVGVTAAIPTSEN 278
>AF393496-1|AAL60421.1| 146|Apis mellifera odorant binding protein
ASP6 protein.
Length = 146
Score = 21.4 bits (43), Expect = 8.4
Identities = 8/26 (30%), Positives = 16/26 (61%)
Frame = -2
Query: 503 IVWSLRII*SRVVLLRVILPRNDRIV 426
I+W + +R++LL +PR + +V
Sbjct: 87 ILWDFFVKNARMILLEEYIPRVESVV 112
>AF339140-1|AAK01304.1| 120|Apis mellifera odorant binding protein
protein.
Length = 120
Score = 21.4 bits (43), Expect = 8.4
Identities = 8/26 (30%), Positives = 16/26 (61%)
Frame = -2
Query: 503 IVWSLRII*SRVVLLRVILPRNDRIV 426
I+W + +R++LL +PR + +V
Sbjct: 61 ILWDFFVKNARMILLEEYIPRVESVV 86
>AB253417-1|BAE86928.1| 567|Apis mellifera alpha-glucosidase
protein.
Length = 567
Score = 21.4 bits (43), Expect = 8.4
Identities = 7/13 (53%), Positives = 10/13 (76%)
Frame = +1
Query: 220 FRHMPRDPSRNPF 258
++ M RDP+R PF
Sbjct: 408 YQTMSRDPARTPF 420
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 186,631
Number of Sequences: 438
Number of extensions: 4153
Number of successful extensions: 21
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 21
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 21
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 21073995
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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