Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= br--1464
         (796 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY344832-1|AAR05803.1|  333|Anopheles gambiae ICHIT protein.           25   3.6  
AY344831-1|AAR05802.1|  333|Anopheles gambiae ICHIT protein.           25   3.6  
EF990671-1|ABS30732.1| 1256|Anopheles gambiae voltage-gated calc...    24   6.2  
AY578799-1|AAT07304.1|  679|Anopheles gambiae brinker protein.         23   8.2  

>AY344832-1|AAR05803.1|  333|Anopheles gambiae ICHIT protein.
          Length = 333

 Score = 24.6 bits (51), Expect = 3.6
 Identities = 18/66 (27%), Positives = 22/66 (33%)
 Frame = +3

Query: 231 PRDPSRNPFTTREDLITLIVITTIQPKIIHAERITITLELRLPRTQ*LTAPDTPINRSIP 410
           P+ P     TT     T +  TT     I       T   R P T   +AP TP   + P
Sbjct: 90  PQSPGDQTTTTLRPATTTLRPTTTTTDWITTTTTEATTTTRFPTTTTTSAPTTPSQWTDP 149

Query: 411 ATQDQT 428
                T
Sbjct: 150 TITTTT 155


>AY344831-1|AAR05802.1|  333|Anopheles gambiae ICHIT protein.
          Length = 333

 Score = 24.6 bits (51), Expect = 3.6
 Identities = 18/66 (27%), Positives = 22/66 (33%)
 Frame = +3

Query: 231 PRDPSRNPFTTREDLITLIVITTIQPKIIHAERITITLELRLPRTQ*LTAPDTPINRSIP 410
           P+ P     TT     T +  TT     I       T   R P T   +AP TP   + P
Sbjct: 90  PQSPGDQTTTTLRPATTTLRPTTTTTDWITTTTTEATTTTRFPTTTTTSAPTTPSQWTDP 149

Query: 411 ATQDQT 428
                T
Sbjct: 150 TITTTT 155


>EF990671-1|ABS30732.1| 1256|Anopheles gambiae voltage-gated calcium
            channel alpha2-delta subunit 1 protein.
          Length = 1256

 Score = 23.8 bits (49), Expect = 6.2
 Identities = 12/39 (30%), Positives = 21/39 (53%)
 Frame = -1

Query: 781  DSNMFICLS*TASTCVRFFGKLDHILVISIGNQDIDREL 665
            D N F+ LS  +    +FFG++D  ++ S+    I R +
Sbjct: 958  DDNGFVILSERSEHTGKFFGQIDGTIMDSLVQDRIYRRV 996


>AY578799-1|AAT07304.1|  679|Anopheles gambiae brinker protein.
          Length = 679

 Score = 23.4 bits (48), Expect = 8.2
 Identities = 7/19 (36%), Positives = 10/19 (52%)
 Frame = +3

Query: 198 HHNRHHGVPNMPRDPSRNP 254
           HH  HH  P++P     +P
Sbjct: 118 HHQHHHQHPHLPHVQQHHP 136


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 784,652
Number of Sequences: 2352
Number of extensions: 14996
Number of successful extensions: 35
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 33
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 35
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 83576403
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)