Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= br--1464
         (796 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BT021212-1|AAX33360.1|  758|Drosophila melanogaster SD03462p pro...    59   8e-09
AJ289232-1|CAC81969.1|  758|Drosophila melanogaster matrix metal...    59   8e-09
AE013599-907|AAF58911.5| 1136|Drosophila melanogaster CG1794-PA,...    59   8e-09
AE013599-906|AAS64885.1|  758|Drosophila melanogaster CG1794-PB,...    59   8e-09
BT009995-1|AAQ22464.1| 1164|Drosophila melanogaster RE37196p pro...    29   9.7  
AE013599-2768|AAF57637.2| 1541|Drosophila melanogaster CG15080-P...    29   9.7  

>BT021212-1|AAX33360.1|  758|Drosophila melanogaster SD03462p
           protein.
          Length = 758

 Score = 58.8 bits (136), Expect = 8e-09
 Identities = 24/39 (61%), Positives = 30/39 (76%)
 Frame = +1

Query: 574 KPNTCDTNYDAVALIRGELFIFKDRYHWRIGAHGRYPGY 690
           KP++C T YDA+++IRGELFIF+  Y WRIG  G Y GY
Sbjct: 512 KPDSCMTYYDAISIIRGELFIFRGPYLWRIGTSGLYNGY 550



 Score = 40.3 bits (90), Expect = 0.003
 Identities = 17/25 (68%), Positives = 20/25 (80%)
 Frame = +3

Query: 690 PMEITRMWSSLPKNLTHVDAVYERQ 764
           P EI R WS+LP+NLT VDAVYE +
Sbjct: 551 PTEIRRHWSALPENLTKVDAVYENK 575


>AJ289232-1|CAC81969.1|  758|Drosophila melanogaster matrix
           metalloproteinase 2-MMP protein.
          Length = 758

 Score = 58.8 bits (136), Expect = 8e-09
 Identities = 24/39 (61%), Positives = 30/39 (76%)
 Frame = +1

Query: 574 KPNTCDTNYDAVALIRGELFIFKDRYHWRIGAHGRYPGY 690
           KP++C T YDA+++IRGELFIF+  Y WRIG  G Y GY
Sbjct: 512 KPDSCMTYYDAISIIRGELFIFRGPYLWRIGTSGLYNGY 550



 Score = 40.3 bits (90), Expect = 0.003
 Identities = 17/25 (68%), Positives = 20/25 (80%)
 Frame = +3

Query: 690 PMEITRMWSSLPKNLTHVDAVYERQ 764
           P EI R WS+LP+NLT VDAVYE +
Sbjct: 551 PTEIRRHWSALPENLTKVDAVYENK 575


>AE013599-907|AAF58911.5| 1136|Drosophila melanogaster CG1794-PA,
            isoform A protein.
          Length = 1136

 Score = 58.8 bits (136), Expect = 8e-09
 Identities = 24/39 (61%), Positives = 30/39 (76%)
 Frame = +1

Query: 574  KPNTCDTNYDAVALIRGELFIFKDRYHWRIGAHGRYPGY 690
            KP++C T YDA+++IRGELFIF+  Y WRIG  G Y GY
Sbjct: 890  KPDSCMTYYDAISIIRGELFIFRGPYLWRIGTSGLYNGY 928



 Score = 40.3 bits (90), Expect = 0.003
 Identities = 17/25 (68%), Positives = 20/25 (80%)
 Frame = +3

Query: 690  PMEITRMWSSLPKNLTHVDAVYERQ 764
            P EI R WS+LP+NLT VDAVYE +
Sbjct: 929  PTEIRRHWSALPENLTKVDAVYENK 953


>AE013599-906|AAS64885.1|  758|Drosophila melanogaster CG1794-PB,
           isoform B protein.
          Length = 758

 Score = 58.8 bits (136), Expect = 8e-09
 Identities = 24/39 (61%), Positives = 30/39 (76%)
 Frame = +1

Query: 574 KPNTCDTNYDAVALIRGELFIFKDRYHWRIGAHGRYPGY 690
           KP++C T YDA+++IRGELFIF+  Y WRIG  G Y GY
Sbjct: 512 KPDSCMTYYDAISIIRGELFIFRGPYLWRIGTSGLYNGY 550



 Score = 40.3 bits (90), Expect = 0.003
 Identities = 17/25 (68%), Positives = 20/25 (80%)
 Frame = +3

Query: 690 PMEITRMWSSLPKNLTHVDAVYERQ 764
           P EI R WS+LP+NLT VDAVYE +
Sbjct: 551 PTEIRRHWSALPENLTKVDAVYENK 575


>BT009995-1|AAQ22464.1| 1164|Drosophila melanogaster RE37196p
           protein.
          Length = 1164

 Score = 28.7 bits (61), Expect = 9.7
 Identities = 18/62 (29%), Positives = 26/62 (41%)
 Frame = +3

Query: 258 TTREDLITLIVITTIQPKIIHAERITITLELRLPRTQ*LTAPDTPINRSIPATQDQTIRS 437
           TT     T    TT +  +    R +  +    PR +  T  +TPI  + PA    +IRS
Sbjct: 681 TTTPSTTTTTTTTTTEAPLTTTTRRSPFVRRNYPRLRTTTTTETPITSTTPAEDRPSIRS 740

Query: 438 IL 443
            L
Sbjct: 741 RL 742


>AE013599-2768|AAF57637.2| 1541|Drosophila melanogaster CG15080-PA
            protein.
          Length = 1541

 Score = 28.7 bits (61), Expect = 9.7
 Identities = 18/62 (29%), Positives = 26/62 (41%)
 Frame = +3

Query: 258  TTREDLITLIVITTIQPKIIHAERITITLELRLPRTQ*LTAPDTPINRSIPATQDQTIRS 437
            TT     T    TT +  +    R +  +    PR +  T  +TPI  + PA    +IRS
Sbjct: 1058 TTTPSTTTTTTTTTTEAPLTTTTRRSPFVRRNYPRLRTTTTTETPITSTTPAEDRPSIRS 1117

Query: 438  IL 443
             L
Sbjct: 1118 RL 1119


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 33,383,725
Number of Sequences: 53049
Number of extensions: 678685
Number of successful extensions: 2310
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 2222
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2300
length of database: 24,988,368
effective HSP length: 84
effective length of database: 20,532,252
effective search space used: 3695805360
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)