Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= br--1461
         (760 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY578810-1|AAT07315.1|  897|Anopheles gambiae smurf protein.           36   0.001
AY753541-1|AAV28544.1| 3398|Anopheles gambiae SGS4 protein.            25   3.3  
AY578812-1|AAT07317.1|  932|Anopheles gambiae wishful thinking p...    24   4.4  

>AY578810-1|AAT07315.1|  897|Anopheles gambiae smurf protein.
          Length = 897

 Score = 36.3 bits (80), Expect = 0.001
 Identities = 17/31 (54%), Positives = 22/31 (70%)
 Frame = +2

Query: 122 ILASYNREEQRHFLQFVTGSPRLPTGGFKAL 214
           I+ SY+ E +   LQFVTGS R+P  GF+AL
Sbjct: 804 IVESYSPEMRAQLLQFVTGSCRVPLQGFRAL 834


>AY753541-1|AAV28544.1| 3398|Anopheles gambiae SGS4 protein.
          Length = 3398

 Score = 24.6 bits (51), Expect = 3.3
 Identities = 11/26 (42%), Positives = 15/26 (57%)
 Frame = +3

Query: 228  LWCVNRWSLIGSG*IFAISDDMCQLL 305
            LW V+ W  IG+G +    DDM  +L
Sbjct: 1379 LWIVSFWVRIGNGEMVPKVDDMLNVL 1404


>AY578812-1|AAT07317.1|  932|Anopheles gambiae wishful thinking
           protein.
          Length = 932

 Score = 24.2 bits (50), Expect = 4.4
 Identities = 11/22 (50%), Positives = 13/22 (59%)
 Frame = -2

Query: 252 DSSDLRTTVSGGFNALNPPVGS 187
           D   LR  VS   NA++PP GS
Sbjct: 818 DPQKLRIVVSKSANAMHPPRGS 839


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 857,453
Number of Sequences: 2352
Number of extensions: 18009
Number of successful extensions: 28
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 28
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 28
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 78586767
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)