BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= br--1460
(767 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
X64461-1|CAA45791.1| 406|Drosophila melanogaster calreticulin p... 74 2e-13
BT001670-1|AAN71425.1| 406|Drosophila melanogaster RE50082p pro... 74 2e-13
AE014297-990|AAF54416.1| 406|Drosophila melanogaster CG9429-PA ... 74 2e-13
AB000718-1|BAA85379.1| 406|Drosophila melanogaster calreticulin... 74 2e-13
U30466-1|AAC47077.1| 297|Drosophila melanogaster Cnx protein. 40 0.004
X99488-1|CAA67846.1| 605|Drosophila melanogaster calnexin protein. 39 0.009
BT003487-1|AAO39490.1| 677|Drosophila melanogaster SD17909p pro... 39 0.009
BT003313-1|AAO25073.1| 605|Drosophila melanogaster GH03249p pro... 39 0.009
AY089406-1|AAL90144.1| 601|Drosophila melanogaster AT22968p pro... 39 0.009
AE014298-1754|AAG22345.2| 570|Drosophila melanogaster CG1924-PA... 39 0.009
AE014297-4372|ABI31215.1| 647|Drosophila melanogaster CG11958-P... 39 0.009
AE014297-4371|ABI31216.1| 605|Drosophila melanogaster CG11958-P... 39 0.009
AE014297-4370|AAN14170.1| 605|Drosophila melanogaster CG11958-P... 39 0.009
AE014297-4369|AAF56887.2| 605|Drosophila melanogaster CG11958-P... 39 0.009
AE014298-2417|AAF48618.2| 639|Drosophila melanogaster CG9906-PA... 38 0.020
AY058370-1|AAL13599.1| 370|Drosophila melanogaster GH13855p pro... 31 1.3
AE014298-592|AAF45914.1| 402|Drosophila melanogaster CG15376-PA... 30 4.0
U19745-1|AAA61761.2| 614|Drosophila melanogaster V-ATPase A sub... 29 9.3
AY089512-1|AAL90250.1| 614|Drosophila melanogaster GH21132p pro... 29 9.3
AF185049-1|AAF00515.1| 614|Drosophila melanogaster vacuolar ATP... 29 9.3
AE014134-2271|AAF53236.1| 614|Drosophila melanogaster CG12403-P... 29 9.3
>X64461-1|CAA45791.1| 406|Drosophila melanogaster calreticulin
protein.
Length = 406
Score = 73.7 bits (173), Expect = 2e-13
Identities = 34/56 (60%), Positives = 38/56 (67%)
Frame = -3
Query: 747 DSNLYKRDEICAVGLDLWQVKSGTIFDDFLITDDPAAAKERGEVIKKRQEGEKKMK 580
D LY R EIC +G DLWQVKSGTIFD+ LITDD A + +K Q GEKKMK
Sbjct: 302 DDKLYLRKEICTLGFDLWQVKSGTIFDNVLITDDVELAAKAAAEVKNTQAGEKKMK 357
>BT001670-1|AAN71425.1| 406|Drosophila melanogaster RE50082p
protein.
Length = 406
Score = 73.7 bits (173), Expect = 2e-13
Identities = 34/56 (60%), Positives = 38/56 (67%)
Frame = -3
Query: 747 DSNLYKRDEICAVGLDLWQVKSGTIFDDFLITDDPAAAKERGEVIKKRQEGEKKMK 580
D LY R EIC +G DLWQVKSGTIFD+ LITDD A + +K Q GEKKMK
Sbjct: 302 DDKLYLRKEICTLGFDLWQVKSGTIFDNVLITDDVELAAKAAAEVKNTQAGEKKMK 357
>AE014297-990|AAF54416.1| 406|Drosophila melanogaster CG9429-PA
protein.
Length = 406
Score = 73.7 bits (173), Expect = 2e-13
Identities = 34/56 (60%), Positives = 38/56 (67%)
Frame = -3
Query: 747 DSNLYKRDEICAVGLDLWQVKSGTIFDDFLITDDPAAAKERGEVIKKRQEGEKKMK 580
D LY R EIC +G DLWQVKSGTIFD+ LITDD A + +K Q GEKKMK
Sbjct: 302 DDKLYLRKEICTLGFDLWQVKSGTIFDNVLITDDVELAAKAAAEVKNTQAGEKKMK 357
>AB000718-1|BAA85379.1| 406|Drosophila melanogaster calreticulin
protein.
Length = 406
Score = 73.7 bits (173), Expect = 2e-13
Identities = 34/56 (60%), Positives = 38/56 (67%)
Frame = -3
Query: 747 DSNLYKRDEICAVGLDLWQVKSGTIFDDFLITDDPAAAKERGEVIKKRQEGEKKMK 580
D LY R EIC +G DLWQVKSGTIFD+ LITDD A + +K Q GEKKMK
Sbjct: 302 DDKLYLRKEICTLGFDLWQVKSGTIFDNVLITDDVELAAKAAAEVKNTQAGEKKMK 357
>U30466-1|AAC47077.1| 297|Drosophila melanogaster Cnx protein.
Length = 297
Score = 39.9 bits (89), Expect = 0.004
Identities = 16/33 (48%), Positives = 23/33 (69%)
Frame = -3
Query: 726 DEICAVGLDLWQVKSGTIFDDFLITDDPAAAKE 628
D I AVGL+LW + S +FD+ +ITDD A++
Sbjct: 245 DAISAVGLELWSMSSDILFDNLIITDDVEVARD 277
>X99488-1|CAA67846.1| 605|Drosophila melanogaster calnexin protein.
Length = 605
Score = 38.7 bits (86), Expect = 0.009
Identities = 16/40 (40%), Positives = 25/40 (62%)
Frame = -3
Query: 747 DSNLYKRDEICAVGLDLWQVKSGTIFDDFLITDDPAAAKE 628
D ++ I AVGL+LW + S +FD+ +ITDD A++
Sbjct: 417 DLKPFQMTPISAVGLELWSMSSDILFDNLIITDDVEVARD 456
>BT003487-1|AAO39490.1| 677|Drosophila melanogaster SD17909p
protein.
Length = 677
Score = 38.7 bits (86), Expect = 0.009
Identities = 16/40 (40%), Positives = 25/40 (62%)
Frame = -3
Query: 747 DSNLYKRDEICAVGLDLWQVKSGTIFDDFLITDDPAAAKE 628
D ++ I AVGL+LW + S +FD+ +ITDD A++
Sbjct: 489 DLKPFQMTPISAVGLELWSMSSDILFDNLIITDDVEVARD 528
>BT003313-1|AAO25073.1| 605|Drosophila melanogaster GH03249p
protein.
Length = 605
Score = 38.7 bits (86), Expect = 0.009
Identities = 16/40 (40%), Positives = 25/40 (62%)
Frame = -3
Query: 747 DSNLYKRDEICAVGLDLWQVKSGTIFDDFLITDDPAAAKE 628
D ++ I AVGL+LW + S +FD+ +ITDD A++
Sbjct: 417 DLKPFQMTPISAVGLELWSMSSDILFDNLIITDDVEVARD 456
>AY089406-1|AAL90144.1| 601|Drosophila melanogaster AT22968p
protein.
Length = 601
Score = 38.7 bits (86), Expect = 0.009
Identities = 16/40 (40%), Positives = 25/40 (62%)
Frame = -3
Query: 747 DSNLYKRDEICAVGLDLWQVKSGTIFDDFLITDDPAAAKE 628
D ++ I AVGL+LW + S +FD+ +ITDD A++
Sbjct: 413 DLKPFQMTPISAVGLELWSMSSDILFDNLIITDDVEVARD 452
>AE014298-1754|AAG22345.2| 570|Drosophila melanogaster CG1924-PA
protein.
Length = 570
Score = 38.7 bits (86), Expect = 0.009
Identities = 16/40 (40%), Positives = 25/40 (62%)
Frame = -3
Query: 747 DSNLYKRDEICAVGLDLWQVKSGTIFDDFLITDDPAAAKE 628
D ++ I AVGL+LW + S +FD+ +ITDD A++
Sbjct: 395 DLKPFQMTPISAVGLELWSMSSDILFDNLIITDDVEVARD 434
>AE014297-4372|ABI31215.1| 647|Drosophila melanogaster CG11958-PC,
isoform C protein.
Length = 647
Score = 38.7 bits (86), Expect = 0.009
Identities = 16/40 (40%), Positives = 25/40 (62%)
Frame = -3
Query: 747 DSNLYKRDEICAVGLDLWQVKSGTIFDDFLITDDPAAAKE 628
D ++ I AVGL+LW + S +FD+ +ITDD A++
Sbjct: 417 DLKPFQMTPISAVGLELWSMSSDILFDNLIITDDVEVARD 456
>AE014297-4371|ABI31216.1| 605|Drosophila melanogaster CG11958-PD,
isoform D protein.
Length = 605
Score = 38.7 bits (86), Expect = 0.009
Identities = 16/40 (40%), Positives = 25/40 (62%)
Frame = -3
Query: 747 DSNLYKRDEICAVGLDLWQVKSGTIFDDFLITDDPAAAKE 628
D ++ I AVGL+LW + S +FD+ +ITDD A++
Sbjct: 417 DLKPFQMTPISAVGLELWSMSSDILFDNLIITDDVEVARD 456
>AE014297-4370|AAN14170.1| 605|Drosophila melanogaster CG11958-PB,
isoform B protein.
Length = 605
Score = 38.7 bits (86), Expect = 0.009
Identities = 16/40 (40%), Positives = 25/40 (62%)
Frame = -3
Query: 747 DSNLYKRDEICAVGLDLWQVKSGTIFDDFLITDDPAAAKE 628
D ++ I AVGL+LW + S +FD+ +ITDD A++
Sbjct: 417 DLKPFQMTPISAVGLELWSMSSDILFDNLIITDDVEVARD 456
>AE014297-4369|AAF56887.2| 605|Drosophila melanogaster CG11958-PA,
isoform A protein.
Length = 605
Score = 38.7 bits (86), Expect = 0.009
Identities = 16/40 (40%), Positives = 25/40 (62%)
Frame = -3
Query: 747 DSNLYKRDEICAVGLDLWQVKSGTIFDDFLITDDPAAAKE 628
D ++ I AVGL+LW + S +FD+ +ITDD A++
Sbjct: 417 DLKPFQMTPISAVGLELWSMSSDILFDNLIITDDVEVARD 456
>AE014298-2417|AAF48618.2| 639|Drosophila melanogaster CG9906-PA
protein.
Length = 639
Score = 37.5 bits (83), Expect = 0.020
Identities = 16/40 (40%), Positives = 25/40 (62%)
Frame = -3
Query: 747 DSNLYKRDEICAVGLDLWQVKSGTIFDDFLITDDPAAAKE 628
D ++ I AVGL+LW + S +FD+ +ITDD A++
Sbjct: 402 DLKPFQMTPINAVGLELWSMSSDILFDNLIITDDVELARD 441
>AY058370-1|AAL13599.1| 370|Drosophila melanogaster GH13855p
protein.
Length = 370
Score = 31.5 bits (68), Expect = 1.3
Identities = 19/69 (27%), Positives = 30/69 (43%)
Frame = +1
Query: 127 SKTLHSRPSTRCQTDNKTLNNYIHQF*A*SPSTRTSVRNNGHILLTHNMSLRIGKIRAKH 306
S T+H + +T +K H+ A + ++ T+ H LTH S G +H
Sbjct: 265 SATIHKKSTTSTTASSKASKTTAHKPSASASASTTTAPPTHHHELTHGKSTLNGHQHHQH 324
Query: 307 THSAKNK*Q 333
HS+ K Q
Sbjct: 325 QHSSSGKHQ 333
>AE014298-592|AAF45914.1| 402|Drosophila melanogaster CG15376-PA
protein.
Length = 402
Score = 29.9 bits (64), Expect = 4.0
Identities = 13/37 (35%), Positives = 20/37 (54%)
Frame = +2
Query: 146 VPAHGARPITKH*IITYINSERNPHLHGHQYETTDTF 256
VP H P T H ++Y + +PH H H +E D++
Sbjct: 323 VPPHH-HPYTVHHPVSYAHPHGHPHAHPHPHEHFDSY 358
>U19745-1|AAA61761.2| 614|Drosophila melanogaster V-ATPase A
subunit protein.
Length = 614
Score = 28.7 bits (61), Expect = 9.3
Identities = 12/38 (31%), Positives = 21/38 (55%)
Frame = +1
Query: 88 YKTLGLLHRMLLYSKTLHSRPSTRCQTDNKTLNNYIHQ 201
YKT+G+L ++ + +T + Q+DNK N I +
Sbjct: 532 YKTVGMLRNIMAFYETARHAVESTAQSDNKITWNTIRE 569
>AY089512-1|AAL90250.1| 614|Drosophila melanogaster GH21132p
protein.
Length = 614
Score = 28.7 bits (61), Expect = 9.3
Identities = 12/38 (31%), Positives = 21/38 (55%)
Frame = +1
Query: 88 YKTLGLLHRMLLYSKTLHSRPSTRCQTDNKTLNNYIHQ 201
YKT+G+L ++ + +T + Q+DNK N I +
Sbjct: 532 YKTVGMLRNIMAFYETARHAVESTAQSDNKITWNTIRE 569
>AF185049-1|AAF00515.1| 614|Drosophila melanogaster vacuolar ATPase
subunit A protein.
Length = 614
Score = 28.7 bits (61), Expect = 9.3
Identities = 12/38 (31%), Positives = 21/38 (55%)
Frame = +1
Query: 88 YKTLGLLHRMLLYSKTLHSRPSTRCQTDNKTLNNYIHQ 201
YKT+G+L ++ + +T + Q+DNK N I +
Sbjct: 532 YKTVGMLRNIMAFYETARHAVESTAQSDNKITWNTIRE 569
>AE014134-2271|AAF53236.1| 614|Drosophila melanogaster CG12403-PA
protein.
Length = 614
Score = 28.7 bits (61), Expect = 9.3
Identities = 12/38 (31%), Positives = 21/38 (55%)
Frame = +1
Query: 88 YKTLGLLHRMLLYSKTLHSRPSTRCQTDNKTLNNYIHQ 201
YKT+G+L ++ + +T + Q+DNK N I +
Sbjct: 532 YKTVGMLRNIMAFYETARHAVESTAQSDNKITWNTIRE 569
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 28,099,131
Number of Sequences: 53049
Number of extensions: 548238
Number of successful extensions: 1508
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 1472
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1508
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3540671772
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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