BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= br--1459 (736 letters) Database: nematostella 59,808 sequences; 16,821,457 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value SB_13364| Best HMM Match : Acetyltransf_1 (HMM E-Value=1.1e-21) 41 0.001 SB_44513| Best HMM Match : Acetyltransf_1 (HMM E-Value=2.7e-08) 34 0.14 SB_34106| Best HMM Match : Acetyltransf_1 (HMM E-Value=1.1e-10) 32 0.55 SB_19774| Best HMM Match : WWE (HMM E-Value=5.4e-24) 30 1.7 SB_49487| Best HMM Match : Zip (HMM E-Value=0.014) 29 3.0 SB_2026| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.0 >SB_13364| Best HMM Match : Acetyltransf_1 (HMM E-Value=1.1e-21) Length = 259 Score = 41.1 bits (92), Expect = 0.001 Identities = 28/96 (29%), Positives = 48/96 (50%), Gaps = 1/96 (1%) Frame = +3 Query: 237 GSRVLQIDTSENS-RRLYIMTLGCLYPYRRLGIGSMMVKHVLNYVKQDGNFDSIFLHVQV 413 G+ V ++D ++ R YI L +RR IG+ +VK + + +D N D + L ++ Sbjct: 163 GAIVCKLDVHKSMVHRGYIAMLAVEKDFRRHKIGTALVKKAIRAMIED-NCDEVVLETEI 221 Query: 414 NNEGAIDSYKXFGFEIVETKERYYKRIEPADAMSYK 521 N+ A+ Y+ GF + RYY + DA+ K Sbjct: 222 TNKAALRLYENLGFVRDKRLFRYY--LNGVDALRLK 255 >SB_44513| Best HMM Match : Acetyltransf_1 (HMM E-Value=2.7e-08) Length = 573 Score = 33.9 bits (74), Expect = 0.14 Identities = 20/69 (28%), Positives = 38/69 (55%), Gaps = 2/69 (2%) Frame = +3 Query: 285 YIMTLGCLYPYRRLGIGSMMVKHVLNYV--KQDGNFDSIFLHVQVNNEGAIDSYKXFGFE 458 YI+++G + YRR IGS+++ +L+ + + + +I+LHV +N A+ Y+ F+ Sbjct: 333 YILSIGVVEGYRRHKIGSLLLDSLLSNLTTPERHSCKAIYLHVLTSNMAAMRFYESRCFQ 392 Query: 459 IVETKERYY 485 YY Sbjct: 393 RFRFLPLYY 401 >SB_34106| Best HMM Match : Acetyltransf_1 (HMM E-Value=1.1e-10) Length = 262 Score = 31.9 bits (69), Expect = 0.55 Identities = 23/85 (27%), Positives = 38/85 (44%) Frame = +3 Query: 255 IDTSENSRRLYIMTLGCLYPYRRLGIGSMMVKHVLNYVKQDGNFDSIFLHVQVNNEGAID 434 +D YI + ++ GIGS M+ H++ Q + LHV N + Sbjct: 170 VDEDVKYNEAYISFILVHPEWQHAGIGSYMLYHLI----QTCMGKDVTLHVSATNSAML- 224 Query: 435 SYKXFGFEIVETKERYYKRIEPADA 509 Y+ FGF+ E +Y+R PA++ Sbjct: 225 LYQRFGFKPEEFIINFYERYLPANS 249 >SB_19774| Best HMM Match : WWE (HMM E-Value=5.4e-24) Length = 729 Score = 30.3 bits (65), Expect = 1.7 Identities = 19/57 (33%), Positives = 31/57 (54%) Frame = +1 Query: 52 LNLVVKMTRAKIELGDVTPHNIKQLKKLNTVVFPVSYNDKFYKDVLEAGELAKLAYY 222 L+++ K+ A LG H+IK LK++NTV+ F ++L +G + KL Y Sbjct: 480 LDVMQKLIEATKSLGLDNLHDIKALKEINTVLSDSDGVSSF--EILHSGLVTKLLSY 534 >SB_49487| Best HMM Match : Zip (HMM E-Value=0.014) Length = 510 Score = 29.5 bits (63), Expect = 3.0 Identities = 17/56 (30%), Positives = 27/56 (48%) Frame = +1 Query: 466 KQKNVTIRE*NQQTPCLTKDHKTTEHTFGQRVSITHKDKRL*CRLTTKQHNVLFVN 633 KQ+N + + +QT C D + H ++ + DK+ C L KQHN +N Sbjct: 417 KQQNRQLMD--KQTNCHLMDKQQNRHLMDKQQNRQLMDKQTNCHLMDKQHNRHLMN 470 >SB_2026| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 1789 Score = 29.5 bits (63), Expect = 3.0 Identities = 13/29 (44%), Positives = 18/29 (62%) Frame = -2 Query: 561 DPLTKGVLGSLMVFCKTWRLLVLFSYSNV 475 DP + G+L ++M TW LV F+Y NV Sbjct: 52 DPYSSGILFAVMTLVSTW--LVAFAYKNV 78 Database: nematostella Posted date: Oct 22, 2007 1:22 PM Number of letters in database: 16,821,457 Number of sequences in database: 59,808 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 21,507,382 Number of Sequences: 59808 Number of extensions: 449154 Number of successful extensions: 998 Number of sequences better than 10.0: 6 Number of HSP's better than 10.0 without gapping: 862 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 997 length of database: 16,821,457 effective HSP length: 80 effective length of database: 12,036,817 effective search space used: 1974037988 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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