Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= br--1457
         (734 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC150258-1|AAI50259.1| 1634|Homo sapiens CENTD1 protein protein.       34   0.61 
BC105091-1|AAI05092.1|  888|Homo sapiens CENTD1 protein protein.       34   0.61 
BC105089-1|AAI05090.1|  888|Homo sapiens CENTD1 protein protein.       34   0.61 
AY049733-1|AAL12170.1| 1704|Homo sapiens ARAP2 protein.                34   0.61 
AF439781-1|AAL32459.1| 1704|Homo sapiens PARX protein protein.         34   0.61 
AB011152-1|BAA25506.2| 1631|Homo sapiens KIAA0580 protein protein.     34   0.61 

>BC150258-1|AAI50259.1| 1634|Homo sapiens CENTD1 protein protein.
          Length = 1634

 Score = 33.9 bits (74), Expect = 0.61
 Identities = 20/60 (33%), Positives = 34/60 (56%), Gaps = 4/60 (6%)
 Frame = -2

Query: 220  EVEQMRLDAECDQPAETSELVDELTVLQH---PKAEGLR-LPQRRR*FRTILDGEKEGPL 53
            E+E++RL  +CD+ +  S L +  +++ H    K + LR  P++ R F  + D E E PL
Sbjct: 1516 ELERLRLSEKCDKESVDSSLKERASMVAHCLEHKDDKLRNRPRKHRSFNCLEDTEPEAPL 1575


>BC105091-1|AAI05092.1|  888|Homo sapiens CENTD1 protein protein.
          Length = 888

 Score = 33.9 bits (74), Expect = 0.61
 Identities = 20/60 (33%), Positives = 34/60 (56%), Gaps = 4/60 (6%)
 Frame = -2

Query: 220 EVEQMRLDAECDQPAETSELVDELTVLQH---PKAEGLR-LPQRRR*FRTILDGEKEGPL 53
           E+E++RL  +CD+ +  S L +  +++ H    K + LR  P++ R F  + D E E PL
Sbjct: 770 ELERLRLSEKCDKESVDSSLKERASMVAHCLEHKDDKLRNRPRKHRSFNCLEDTEPEAPL 829


>BC105089-1|AAI05090.1|  888|Homo sapiens CENTD1 protein protein.
          Length = 888

 Score = 33.9 bits (74), Expect = 0.61
 Identities = 20/60 (33%), Positives = 34/60 (56%), Gaps = 4/60 (6%)
 Frame = -2

Query: 220 EVEQMRLDAECDQPAETSELVDELTVLQH---PKAEGLR-LPQRRR*FRTILDGEKEGPL 53
           E+E++RL  +CD+ +  S L +  +++ H    K + LR  P++ R F  + D E E PL
Sbjct: 770 ELERLRLSEKCDKESVDSSLKERASMVAHCLEHKDDKLRNRPRKHRSFNCLEDTEPEAPL 829


>AY049733-1|AAL12170.1| 1704|Homo sapiens ARAP2 protein.
          Length = 1704

 Score = 33.9 bits (74), Expect = 0.61
 Identities = 20/60 (33%), Positives = 34/60 (56%), Gaps = 4/60 (6%)
 Frame = -2

Query: 220  EVEQMRLDAECDQPAETSELVDELTVLQH---PKAEGLR-LPQRRR*FRTILDGEKEGPL 53
            E+E++RL  +CD+ +  S L +  +++ H    K + LR  P++ R F  + D E E PL
Sbjct: 1586 ELERLRLSEKCDKESVDSSLKERASMVAHCLEHKDDKLRNRPRKHRSFNCLEDTEPEAPL 1645


>AF439781-1|AAL32459.1| 1704|Homo sapiens PARX protein protein.
          Length = 1704

 Score = 33.9 bits (74), Expect = 0.61
 Identities = 20/60 (33%), Positives = 34/60 (56%), Gaps = 4/60 (6%)
 Frame = -2

Query: 220  EVEQMRLDAECDQPAETSELVDELTVLQH---PKAEGLR-LPQRRR*FRTILDGEKEGPL 53
            E+E++RL  +CD+ +  S L +  +++ H    K + LR  P++ R F  + D E E PL
Sbjct: 1586 ELERLRLSEKCDKESVDSSLKERASMVAHCLEHKDDKLRNRPRKHRSFNCLEDTEPEAPL 1645


>AB011152-1|BAA25506.2| 1631|Homo sapiens KIAA0580 protein protein.
          Length = 1631

 Score = 33.9 bits (74), Expect = 0.61
 Identities = 20/60 (33%), Positives = 34/60 (56%), Gaps = 4/60 (6%)
 Frame = -2

Query: 220  EVEQMRLDAECDQPAETSELVDELTVLQH---PKAEGLR-LPQRRR*FRTILDGEKEGPL 53
            E+E++RL  +CD+ +  S L +  +++ H    K + LR  P++ R F  + D E E PL
Sbjct: 1513 ELERLRLSEKCDKESVDSSLKERASMVAHCLEHKDDKLRNRPRKHRSFNCLEDTEPEAPL 1572


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 111,087,772
Number of Sequences: 237096
Number of extensions: 2438959
Number of successful extensions: 7526
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 7462
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7526
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 8735159784
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)