Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= br--1457
         (734 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AE014134-1568|AAF52714.3|  250|Drosophila melanogaster CG32983-P...    30   3.8  

>AE014134-1568|AAF52714.3|  250|Drosophila melanogaster CG32983-PA
           protein.
          Length = 250

 Score = 29.9 bits (64), Expect = 3.8
 Identities = 24/67 (35%), Positives = 35/67 (52%), Gaps = 1/67 (1%)
 Frame = -2

Query: 442 KCNKIYL*IGLNITIQKTLVLYSHY-MNIQKLPKTESEHPTFHMVLSALLLMYI*KPEAR 266
           KC K +L  GL   +  T+ L +   +++  +  T    PTF  VLSAL+L+ I   EA+
Sbjct: 133 KCRKSFLPNGLVTGVIVTIFLVALLPLSVLSVVSTRYFFPTFCAVLSALVLIVI-PLEAQ 191

Query: 265 SESGRAQ 245
              GR Q
Sbjct: 192 FMHGRLQ 198


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 33,494,698
Number of Sequences: 53049
Number of extensions: 708612
Number of successful extensions: 1509
Number of sequences better than 10.0: 1
Number of HSP's better than 10.0 without gapping: 1476
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1509
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3314233461
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)