BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= br--1456 (1001 letters) Database: bee 438 sequences; 146,343 total letters Searching......................................................done Score E Sequences producing significant alignments: (bits) Value DQ026034-1|AAY87893.1| 569|Apis mellifera nicotinic acetylcholi... 24 2.5 DQ026033-1|AAY87892.1| 569|Apis mellifera nicotinic acetylcholi... 24 2.5 DQ026032-1|AAY87891.1| 566|Apis mellifera nicotinic acetylcholi... 24 2.5 AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecul... 24 2.5 AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member A... 24 2.5 DQ011228-1|AAY63897.1| 486|Apis mellifera Amt-2-like protein pr... 23 4.3 AJ968562-1|CAI91546.1| 998|Apis mellifera protein ( Apis mellif... 23 4.3 AB231585-1|BAE17127.1| 898|Apis mellifera Mahya protein. 23 5.7 AF393495-1|AAL60420.1| 136|Apis mellifera odorant binding prote... 22 10.0 AB022908-1|BAA86909.1| 493|Apis mellifera amylase protein. 22 10.0 >DQ026034-1|AAY87893.1| 569|Apis mellifera nicotinic acetylcholine receptor alpha4subunit protein. Length = 569 Score = 23.8 bits (49), Expect = 2.5 Identities = 9/22 (40%), Positives = 16/22 (72%) Frame = -3 Query: 498 CNKIYL*IGLNITIQKTLVFYS 433 C++ YL I NIT+++ +FY+ Sbjct: 227 CDEPYLDITFNITMRRKTLFYT 248 >DQ026033-1|AAY87892.1| 569|Apis mellifera nicotinic acetylcholine receptor alpha4subunit protein. Length = 569 Score = 23.8 bits (49), Expect = 2.5 Identities = 9/22 (40%), Positives = 16/22 (72%) Frame = -3 Query: 498 CNKIYL*IGLNITIQKTLVFYS 433 C++ YL I NIT+++ +FY+ Sbjct: 227 CDEPYLDITFNITMRRKTLFYT 248 >DQ026032-1|AAY87891.1| 566|Apis mellifera nicotinic acetylcholine receptor alpha3subunit protein. Length = 566 Score = 23.8 bits (49), Expect = 2.5 Identities = 9/22 (40%), Positives = 16/22 (72%) Frame = -3 Query: 498 CNKIYL*IGLNITIQKTLVFYS 433 C++ YL I NIT+++ +FY+ Sbjct: 223 CDEPYLDITFNITMRRKTLFYT 244 >AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecule AbsCAM-Ig7B protein. Length = 1923 Score = 23.8 bits (49), Expect = 2.5 Identities = 9/22 (40%), Positives = 13/22 (59%) Frame = +3 Query: 255 IQPHLLYLVWYPHSVTLGEGRS 320 +Q H+ Y W S +GEG+S Sbjct: 1279 LQQHVEYQFWVTGSTRVGEGQS 1300 >AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member AbsCAM-Ig7A protein. Length = 1919 Score = 23.8 bits (49), Expect = 2.5 Identities = 9/22 (40%), Positives = 13/22 (59%) Frame = +3 Query: 255 IQPHLLYLVWYPHSVTLGEGRS 320 +Q H+ Y W S +GEG+S Sbjct: 1275 LQQHVEYQFWVTGSTRVGEGQS 1296 >DQ011228-1|AAY63897.1| 486|Apis mellifera Amt-2-like protein protein. Length = 486 Score = 23.0 bits (47), Expect = 4.3 Identities = 6/13 (46%), Positives = 10/13 (76%) Frame = +3 Query: 255 IQPHLLYLVWYPH 293 +QP L++ +W PH Sbjct: 169 VQPFLIHWIWTPH 181 >AJ968562-1|CAI91546.1| 998|Apis mellifera protein ( Apis mellifera ORF for hypotheticalprotein. ). Length = 998 Score = 23.0 bits (47), Expect = 4.3 Identities = 12/41 (29%), Positives = 18/41 (43%) Frame = -3 Query: 468 NITIQKTLVFYSHYMNIQKLPKTESEHPTFHMVLSALLLMY 346 N+T+ + S+Y I L + PT+ L LMY Sbjct: 628 NVTLSTKCPYPSYYSYIGVLTLVATSMPTYICYLGKAYLMY 668 >AB231585-1|BAE17127.1| 898|Apis mellifera Mahya protein. Length = 898 Score = 22.6 bits (46), Expect = 5.7 Identities = 12/37 (32%), Positives = 21/37 (56%) Frame = -1 Query: 329 RGVRAALAQCDRVWVPYEVEQMRLDLNATNQPKLQSW 219 R V A+ DRV V E++ + +D+ T++ +Q W Sbjct: 560 RYVYASQPDKDRVLVISEIQMVIVDVIPTDKNPVQLW 596 >AF393495-1|AAL60420.1| 136|Apis mellifera odorant binding protein ASP4 protein. Length = 136 Score = 21.8 bits (44), Expect = 10.0 Identities = 10/22 (45%), Positives = 15/22 (68%) Frame = -1 Query: 503 LNAIKSIYKLD*I*QYKKLSCF 438 L+ +KS+Y+ + Q KKL CF Sbjct: 34 LSDLKSMYESNSEEQMKKLGCF 55 >AB022908-1|BAA86909.1| 493|Apis mellifera amylase protein. Length = 493 Score = 21.8 bits (44), Expect = 10.0 Identities = 9/27 (33%), Positives = 13/27 (48%) Frame = -1 Query: 188 GGRAALPAAPEIIQNQTRWGERRSPLS 108 GG P I+ ++ W ER P+S Sbjct: 58 GGVQVSPVQENIVIDKRPWWERYQPIS 84 Database: bee Posted date: Oct 23, 2007 1:17 PM Number of letters in database: 146,343 Number of sequences in database: 438 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 298,632 Number of Sequences: 438 Number of extensions: 7349 Number of successful extensions: 26 Number of sequences better than 10.0: 10 Number of HSP's better than 10.0 without gapping: 24 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 26 length of database: 146,343 effective HSP length: 58 effective length of database: 120,939 effective search space used: 33258225 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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