Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= br--1453
         (820 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY341186-1|AAR13750.1|  189|Anopheles gambiae GNBP A1 protein.         27   0.53 
AY341185-1|AAR13749.1|  189|Anopheles gambiae GNBP A1 protein.         27   0.53 
AY341183-1|AAR13747.1|  189|Anopheles gambiae GNBP A1 protein.         27   0.53 
AY341187-1|AAR13751.1|  189|Anopheles gambiae GNBP A1 protein.         27   0.69 

>AY341186-1|AAR13750.1|  189|Anopheles gambiae GNBP A1 protein.
          Length = 189

 Score = 27.5 bits (58), Expect = 0.53
 Identities = 28/93 (30%), Positives = 37/93 (39%), Gaps = 5/93 (5%)
 Frame = +1

Query: 223 GSGEWT----APALGQDWPVF-WLYVR*EQPGVFAAESGLLTKNLWITDMRPAAHPTRRR 387
           G G WT     PAL     ++ W+YV+      FA E        W+TD +   H   R 
Sbjct: 73  GDGRWTFDTNKPALPNGTIIYYWVYVQ------FANEG------YWLTDKK---HTVTRT 117

Query: 388 RSIRVPHPGTYQWTGASIDSRCTECLCPPLLTT 486
           ++   P   T   T     +  T   CPP LTT
Sbjct: 118 KATVAPKSTTTTTTTTVKPTTTTPPPCPPTLTT 150


>AY341185-1|AAR13749.1|  189|Anopheles gambiae GNBP A1 protein.
          Length = 189

 Score = 27.5 bits (58), Expect = 0.53
 Identities = 28/93 (30%), Positives = 37/93 (39%), Gaps = 5/93 (5%)
 Frame = +1

Query: 223 GSGEWT----APALGQDWPVF-WLYVR*EQPGVFAAESGLLTKNLWITDMRPAAHPTRRR 387
           G G WT     PAL     ++ W+YV+      FA E        W+TD +   H   R 
Sbjct: 73  GDGRWTFDTNKPALPNGTIIYYWVYVQ------FANEG------YWLTDKK---HTVTRT 117

Query: 388 RSIRVPHPGTYQWTGASIDSRCTECLCPPLLTT 486
           ++   P   T   T     +  T   CPP LTT
Sbjct: 118 KATVAPKSTTTTTTTTVKPTTTTPPPCPPTLTT 150


>AY341183-1|AAR13747.1|  189|Anopheles gambiae GNBP A1 protein.
          Length = 189

 Score = 27.5 bits (58), Expect = 0.53
 Identities = 28/93 (30%), Positives = 37/93 (39%), Gaps = 5/93 (5%)
 Frame = +1

Query: 223 GSGEWT----APALGQDWPVF-WLYVR*EQPGVFAAESGLLTKNLWITDMRPAAHPTRRR 387
           G G WT     PAL     ++ W+YV+      FA E        W+TD +   H   R 
Sbjct: 73  GDGRWTFDTNKPALPNGTIIYYWVYVQ------FANEG------YWLTDKK---HTVTRT 117

Query: 388 RSIRVPHPGTYQWTGASIDSRCTECLCPPLLTT 486
           ++   P   T   T     +  T   CPP LTT
Sbjct: 118 KATVAPKSTTTTTTTTVKPTTTTPPPCPPTLTT 150


>AY341187-1|AAR13751.1|  189|Anopheles gambiae GNBP A1 protein.
          Length = 189

 Score = 27.1 bits (57), Expect = 0.69
 Identities = 28/93 (30%), Positives = 37/93 (39%), Gaps = 5/93 (5%)
 Frame = +1

Query: 223 GSGEWT----APALGQDWPVF-WLYVR*EQPGVFAAESGLLTKNLWITDMRPAAHPTRRR 387
           G G WT     PAL     ++ W+YV+      FA E        W+TD +   H   R 
Sbjct: 73  GDGRWTFDTNKPALPNGTIIYYWVYVQ------FANEG------YWLTDKK---HTITRT 117

Query: 388 RSIRVPHPGTYQWTGASIDSRCTECLCPPLLTT 486
           ++   P   T   T     +  T   CPP LTT
Sbjct: 118 KATVAPKSTTTTTTTTVKPTTTTPPPCPPTLTT 150


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 857,723
Number of Sequences: 2352
Number of extensions: 18686
Number of successful extensions: 26
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 26
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 26
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 86902827
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)