Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= br--1453
(820 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF283408-1|AAL38109.1| 1537|Homo sapiens candidate tumor suppres... 35 0.31
AF176832-1|AAF70379.1| 4599|Homo sapiens low density lipoprotein... 35 0.31
AC068195-1|AAX93243.1| 1126|Homo sapiens unknown protein. 35 0.31
AB209707-1|BAD92944.1| 1720|Homo sapiens low density lipoprotein... 35 0.31
U33837-1|AAB41649.1| 4655|Homo sapiens gp330 precursor protein. 35 0.41
AY265358-1|AAP88586.1| 4655|Homo sapiens glycoprotein receptor g... 35 0.41
AC007556-2|AAX88965.1| 3881|Homo sapiens unknown protein. 35 0.41
AY265357-1|AAP88585.1| 4655|Homo sapiens glycoprotein receptor g... 34 0.71
U04441-1|AAB02882.1| 1751|Homo sapiens glycoprotein 330 protein. 33 0.94
AJ243706-1|CAB63108.1| 1681|Homo sapiens RB-binding protein prot... 31 5.0
>AF283408-1|AAL38109.1| 1537|Homo sapiens candidate tumor suppressor
protein protein.
Length = 1537
Score = 35.1 bits (77), Expect = 0.31
Identities = 20/70 (28%), Positives = 34/70 (48%)
Frame = +1
Query: 1 ALCIPARLICNGVVNCPNITTSEKKFWTAEEKRAKEAYSEDSLRRLGYLDALAGLPLGKM 180
A CIP R +C+G+ +C + + E RA E +SL +L + G
Sbjct: 967 AHCIPIRWLCDGIHDCVDGSDEENCERGGNICRADEFLCNNSLCKLHFWVCDGEDDCGDN 1026
Query: 181 NDESPELCAR 210
+DE+P++C +
Sbjct: 1027 SDEAPDMCVK 1036
>AF176832-1|AAF70379.1| 4599|Homo sapiens low density lipoprotein
receptor related protein-deleted in tumor protein.
Length = 4599
Score = 35.1 bits (77), Expect = 0.31
Identities = 20/70 (28%), Positives = 34/70 (48%)
Frame = +1
Query: 1 ALCIPARLICNGVVNCPNITTSEKKFWTAEEKRAKEAYSEDSLRRLGYLDALAGLPLGKM 180
A CIP R +C+G+ +C + + E RA E +SL +L + G
Sbjct: 3643 AHCIPIRWLCDGIHDCVDGSDEENCERGGNICRADEFLCNNSLCKLHFWVCDGEDDCGDN 3702
Query: 181 NDESPELCAR 210
+DE+P++C +
Sbjct: 3703 SDEAPDMCVK 3712
>AC068195-1|AAX93243.1| 1126|Homo sapiens unknown protein.
Length = 1126
Score = 35.1 bits (77), Expect = 0.31
Identities = 20/70 (28%), Positives = 34/70 (48%)
Frame = +1
Query: 1 ALCIPARLICNGVVNCPNITTSEKKFWTAEEKRAKEAYSEDSLRRLGYLDALAGLPLGKM 180
A CIP R +C+G+ +C + + E RA E +SL +L + G
Sbjct: 501 AHCIPIRWLCDGIHDCVDGSDEENCERGGNICRADEFLCNNSLCKLHFWVCDGEDDCGDN 560
Query: 181 NDESPELCAR 210
+DE+P++C +
Sbjct: 561 SDEAPDMCVK 570
>AB209707-1|BAD92944.1| 1720|Homo sapiens low density
lipoprotein-related protein 1B variant protein.
Length = 1720
Score = 35.1 bits (77), Expect = 0.31
Identities = 20/70 (28%), Positives = 34/70 (48%)
Frame = +1
Query: 1 ALCIPARLICNGVVNCPNITTSEKKFWTAEEKRAKEAYSEDSLRRLGYLDALAGLPLGKM 180
A CIP R +C+G+ +C + + E RA E +SL +L + G
Sbjct: 764 AHCIPIRWLCDGIHDCVDGSDEENCERGGNICRADEFLCNNSLCKLHFWVCDGEDDCGDN 823
Query: 181 NDESPELCAR 210
+DE+P++C +
Sbjct: 824 SDEAPDMCVK 833
>U33837-1|AAB41649.1| 4655|Homo sapiens gp330 precursor protein.
Length = 4655
Score = 34.7 bits (76), Expect = 0.41
Identities = 29/93 (31%), Positives = 40/93 (43%), Gaps = 3/93 (3%)
Frame = +1
Query: 7 CIPARLICNGVVNCPNITTSEKKFW---TAEEKRAKEAYSEDSLRRLGYLDALAGLPLGK 177
CIP ICNGV NC + TS++K T + K S + R+ D G
Sbjct: 2793 CIPREFICNGVDNCHDNNTSDEKNCPDRTCQSGYTKCHNSNICIPRVYLCD--GDNDCGD 2850
Query: 178 MNDESPELCARARSTGSGEWTAPALGQDWPVFW 276
+DE+P C + S E+ A G+ P W
Sbjct: 2851 NSDENPTYCT-THTCSSSEFQC-ASGRCIPQHW 2881
>AY265358-1|AAP88586.1| 4655|Homo sapiens glycoprotein receptor
gp330/megalin precursor protein.
Length = 4655
Score = 34.7 bits (76), Expect = 0.41
Identities = 29/93 (31%), Positives = 40/93 (43%), Gaps = 3/93 (3%)
Frame = +1
Query: 7 CIPARLICNGVVNCPNITTSEKKFW---TAEEKRAKEAYSEDSLRRLGYLDALAGLPLGK 177
CIP ICNGV NC + TS++K T + K S + R+ D G
Sbjct: 2793 CIPREFICNGVDNCHDNNTSDEKNCPDRTCQSGYTKCHNSNICIPRVYLCD--GDNDCGD 2850
Query: 178 MNDESPELCARARSTGSGEWTAPALGQDWPVFW 276
+DE+P C + S E+ A G+ P W
Sbjct: 2851 NSDENPTYCT-THTCSSSEFQC-ASGRCIPQHW 2881
>AC007556-2|AAX88965.1| 3881|Homo sapiens unknown protein.
Length = 3881
Score = 34.7 bits (76), Expect = 0.41
Identities = 29/93 (31%), Positives = 40/93 (43%), Gaps = 3/93 (3%)
Frame = +1
Query: 7 CIPARLICNGVVNCPNITTSEKKFW---TAEEKRAKEAYSEDSLRRLGYLDALAGLPLGK 177
CIP ICNGV NC + TS++K T + K S + R+ D G
Sbjct: 2019 CIPREFICNGVDNCHDNNTSDEKNCPDRTCQSGYTKCHNSNICIPRVYLCD--GDNDCGD 2076
Query: 178 MNDESPELCARARSTGSGEWTAPALGQDWPVFW 276
+DE+P C + S E+ A G+ P W
Sbjct: 2077 NSDENPTYCT-THTCSSSEFQC-ASGRCIPQHW 2107
>AY265357-1|AAP88585.1| 4655|Homo sapiens glycoprotein receptor
gp330/megalin precursor protein.
Length = 4655
Score = 33.9 bits (74), Expect = 0.71
Identities = 28/93 (30%), Positives = 40/93 (43%), Gaps = 3/93 (3%)
Frame = +1
Query: 7 CIPARLICNGVVNCPNITTSEKKFW---TAEEKRAKEAYSEDSLRRLGYLDALAGLPLGK 177
CIP ICNGV NC + TS++K T + K S + R+ D G
Sbjct: 2793 CIPREFICNGVDNCHDNNTSDEKNCPDRTCQSGYTKCHNSNICIPRVYLCD--GDNDCGD 2850
Query: 178 MNDESPELCARARSTGSGEWTAPALGQDWPVFW 276
+DE+P C + S E+ + G+ P W
Sbjct: 2851 NSDENPTYCT-THTCSSSEFQCTS-GRCIPQHW 2881
>U04441-1|AAB02882.1| 1751|Homo sapiens glycoprotein 330 protein.
Length = 1751
Score = 33.5 bits (73), Expect = 0.94
Identities = 13/23 (56%), Positives = 16/23 (69%)
Frame = +1
Query: 7 CIPARLICNGVVNCPNITTSEKK 75
CIP ICNGV NC + TS++K
Sbjct: 89 CIPREFICNGVDNCHDNNTSDEK 111
>AJ243706-1|CAB63108.1| 1681|Homo sapiens RB-binding protein
protein.
Length = 1681
Score = 31.1 bits (67), Expect = 5.0
Identities = 23/85 (27%), Positives = 35/85 (41%), Gaps = 4/85 (4%)
Frame = -1
Query: 469 GTGTQYSGCQWRLQ----SIGKSLDVEREWSDGGALGAPRAACQ*SKDSSSGDRFRQQRR 302
G G WR + + G++ E E + G A+ C S +G R
Sbjct: 62 GVGWDSFSSPWRRRRTAWACGETSSSEAEKAQGAAVARTTRTCCCSSRVCTG-LGPSGAR 120
Query: 301 QVAPSAHIAKTLASPALEQEQSTLH 227
+ P AH+ LA PA+ + +TLH
Sbjct: 121 SLGPGAHLRLALAQPAVMEAATTLH 145
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 120,846,319
Number of Sequences: 237096
Number of extensions: 2803899
Number of successful extensions: 6291
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 5892
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6291
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 10203625794
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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