Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= br--1453
         (820 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z81556-5|CAB04520.1|  302|Caenorhabditis elegans Hypothetical pr...    30   2.3  
L11247-4|AAK84520.1|  392|Caenorhabditis elegans Hypothetical pr...    30   2.3  
U00035-3|AAA50645.1|  548|Caenorhabditis elegans Egg sterile (un...    29   4.0  
Z73907-1|CAA98124.1| 4753|Caenorhabditis elegans Hypothetical pr...    28   7.0  
Z68114-8|CAA92162.1|  317|Caenorhabditis elegans Hypothetical pr...    28   7.0  
M96150-1|AAA28105.1| 4753|Caenorhabditis elegans LDL receptor-re...    28   7.0  
Z96048-6|CAE17841.1|  327|Caenorhabditis elegans Hypothetical pr...    28   9.2  
Z81132-15|CAE17969.1|  327|Caenorhabditis elegans Hypothetical p...    28   9.2  
Z81044-8|CAI79147.2|  165|Caenorhabditis elegans Hypothetical pr...    28   9.2  
U46673-1|AAC48153.4| 1003|Caenorhabditis elegans Insulin recepto...    28   9.2  
U41557-6|AAA83307.1|  589|Caenorhabditis elegans Collagen sequen...    28   9.2  
AY064245-1|AAL40865.1| 1003|Caenorhabditis elegans insulin recep...    28   9.2  

>Z81556-5|CAB04520.1|  302|Caenorhabditis elegans Hypothetical
           protein F58G1.5 protein.
          Length = 302

 Score = 29.9 bits (64), Expect = 2.3
 Identities = 14/45 (31%), Positives = 23/45 (51%)
 Frame = +1

Query: 37  VVNCPNITTSEKKFWTAEEKRAKEAYSEDSLRRLGYLDALAGLPL 171
           +V+  + T  EK FW A+  R +  Y+E+ +    Y +   G PL
Sbjct: 69  IVHGVSDTAGEKPFWAAQWFRKEGKYAENEIYSTTYFNGAQGNPL 113


>L11247-4|AAK84520.1|  392|Caenorhabditis elegans Hypothetical
           protein F09G8.3 protein.
          Length = 392

 Score = 29.9 bits (64), Expect = 2.3
 Identities = 13/30 (43%), Positives = 21/30 (70%)
 Frame = +2

Query: 299 LASLLPKAVS*RRIFGLLTCGPRRTQRAAV 388
           +A+L P+A+   R+ GLLT  PR+ +R+ V
Sbjct: 349 VAALQPEAIEPLRLSGLLTLDPRKNERSKV 378


>U00035-3|AAA50645.1|  548|Caenorhabditis elegans Egg sterile
           (unfertilizable) protein2 protein.
          Length = 548

 Score = 29.1 bits (62), Expect = 4.0
 Identities = 9/17 (52%), Positives = 13/17 (76%)
 Frame = +1

Query: 4   LCIPARLICNGVVNCPN 54
           +C+ A  +CNGV NCP+
Sbjct: 189 ICLTAEKLCNGVENCPD 205


>Z73907-1|CAA98124.1| 4753|Caenorhabditis elegans Hypothetical protein
            F29D11.1 protein.
          Length = 4753

 Score = 28.3 bits (60), Expect = 7.0
 Identities = 24/94 (25%), Positives = 44/94 (46%), Gaps = 3/94 (3%)
 Frame = +1

Query: 7    CIPARLICNGVVNCPNITTSEKKFWTAEEKR--AKEAYSEDSLRRL-GYLDALAGLPLGK 177
            CIPA+  C+G  +C + +  + K+    +K   A + +  D+ R +       +    G 
Sbjct: 1114 CIPAQYGCDGDNDCGDYSDEDVKYCKDGQKPVCAAKKFQCDNHRCIPEQWKCDSDNDCGD 1173

Query: 178  MNDESPELCARARSTGSGEWTAPALGQDWPVFWL 279
             +DE  E+C  A  T +    + A G+  P++WL
Sbjct: 1174 GSDEKLEMCGNA--TCAANQFSCANGRCIPIYWL 1205


>Z68114-8|CAA92162.1|  317|Caenorhabditis elegans Hypothetical
           protein F17A2.11 protein.
          Length = 317

 Score = 28.3 bits (60), Expect = 7.0
 Identities = 16/48 (33%), Positives = 27/48 (56%), Gaps = 5/48 (10%)
 Frame = +2

Query: 662 VYTHPI*PSLRY--SVLQ---TDHRLERGDNIQTLSSYISIRLIYNSI 790
           V TH + P +RY   V+    TDH +     +QT+ SY+ I +++ S+
Sbjct: 148 VVTHSLLPEVRYLFEVINSNVTDHSVIGYITLQTVPSYLIISIVFGSV 195


>M96150-1|AAA28105.1| 4753|Caenorhabditis elegans LDL receptor-related
            protein protein.
          Length = 4753

 Score = 28.3 bits (60), Expect = 7.0
 Identities = 24/94 (25%), Positives = 44/94 (46%), Gaps = 3/94 (3%)
 Frame = +1

Query: 7    CIPARLICNGVVNCPNITTSEKKFWTAEEKR--AKEAYSEDSLRRL-GYLDALAGLPLGK 177
            CIPA+  C+G  +C + +  + K+    +K   A + +  D+ R +       +    G 
Sbjct: 1114 CIPAQYGCDGDNDCGDYSDEDVKYCKDGQKPVCAAKKFQCDNHRCIPEQWKCDSDNDCGD 1173

Query: 178  MNDESPELCARARSTGSGEWTAPALGQDWPVFWL 279
             +DE  E+C  A  T +    + A G+  P++WL
Sbjct: 1174 GSDEKLEMCGNA--TCAANQFSCANGRCIPIYWL 1205


>Z96048-6|CAE17841.1|  327|Caenorhabditis elegans Hypothetical
           protein F57A10.6 protein.
          Length = 327

 Score = 27.9 bits (59), Expect = 9.2
 Identities = 19/66 (28%), Positives = 30/66 (45%)
 Frame = -3

Query: 371 CAAGRMSVIQRFFVRRPLSAAKTPGCS*RTYSQNTGQSCPRAGAVHSPLPVLLALAHNSG 192
           C A +M   +  FV+  +   +  G   +       Q C +AG  ++P   LL L +N  
Sbjct: 26  CGACKMFFRRALFVKN-IDTCRQKGECIKKCRYCRFQKCIQAGMSYTPTENLLELKNNDS 84

Query: 191 DSSFIF 174
            S+FIF
Sbjct: 85  LSAFIF 90


>Z81132-15|CAE17969.1|  327|Caenorhabditis elegans Hypothetical
           protein F57A10.6 protein.
          Length = 327

 Score = 27.9 bits (59), Expect = 9.2
 Identities = 19/66 (28%), Positives = 30/66 (45%)
 Frame = -3

Query: 371 CAAGRMSVIQRFFVRRPLSAAKTPGCS*RTYSQNTGQSCPRAGAVHSPLPVLLALAHNSG 192
           C A +M   +  FV+  +   +  G   +       Q C +AG  ++P   LL L +N  
Sbjct: 26  CGACKMFFRRALFVKN-IDTCRQKGECIKKCRYCRFQKCIQAGMSYTPTENLLELKNNDS 84

Query: 191 DSSFIF 174
            S+FIF
Sbjct: 85  LSAFIF 90


>Z81044-8|CAI79147.2|  165|Caenorhabditis elegans Hypothetical
           protein C30H6.12 protein.
          Length = 165

 Score = 27.9 bits (59), Expect = 9.2
 Identities = 13/36 (36%), Positives = 19/36 (52%)
 Frame = -1

Query: 214 SPWHTTLEIRRSFFLKEVQLEHQGSPIFSNCPQSTL 107
           S W+  L  RR+    E+ +   G PIF+  P ST+
Sbjct: 10  SDWNPALVSRRASVPMEIIIGGNGKPIFTATPSSTV 45


>U46673-1|AAC48153.4| 1003|Caenorhabditis elegans Insulin receptor
           substrate homologprotein 1 protein.
          Length = 1003

 Score = 27.9 bits (59), Expect = 9.2
 Identities = 13/32 (40%), Positives = 17/32 (53%)
 Frame = +1

Query: 316 ESGLLTKNLWITDMRPAAHPTRRRRSIRVPHP 411
           E G+LT   W   +    H +RRR+  RVP P
Sbjct: 190 EGGILTIEGWRRAIVKLIHESRRRKMDRVPRP 221


>U41557-6|AAA83307.1|  589|Caenorhabditis elegans Collagen sequence
           x-hybridizingprotein 1 protein.
          Length = 589

 Score = 27.9 bits (59), Expect = 9.2
 Identities = 13/34 (38%), Positives = 17/34 (50%)
 Frame = +1

Query: 358 RPAAHPTRRRRSIRVPHPGTYQWTGASIDSRCTE 459
           RP  HP+RR R  R+P P     + A   S  T+
Sbjct: 98  RPHPHPSRRPRPTRLPRPSRSPHSDAPEPSAATD 131


>AY064245-1|AAL40865.1| 1003|Caenorhabditis elegans insulin receptor
           substrate-likeprotein protein.
          Length = 1003

 Score = 27.9 bits (59), Expect = 9.2
 Identities = 13/32 (40%), Positives = 17/32 (53%)
 Frame = +1

Query: 316 ESGLLTKNLWITDMRPAAHPTRRRRSIRVPHP 411
           E G+LT   W   +    H +RRR+  RVP P
Sbjct: 190 EGGILTIEGWRRAIVKLIHESRRRKMDRVPRP 221


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,703,654
Number of Sequences: 27780
Number of extensions: 411301
Number of successful extensions: 1106
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 998
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1106
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 2019417216
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)