Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= br--1451
         (764 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ271193-1|CAB66001.1| 1623|Anopheles gambiae laminin gamma 1 pr...    29   0.16 
AF487781-1|AAL96668.1|  533|Anopheles gambiae cytochrome P450 CY...    27   0.84 
AF313909-1|AAL99382.1| 1024|Anopheles gambiae collagen IV alpha ...    26   1.5  
EF117200-1|ABL67437.1|  421|Anopheles gambiae serpin 1 protein.        25   1.9  
DQ974160-1|ABJ52800.1|  235|Anopheles gambiae serpin 1 protein.        25   1.9  
M93691-2|AAA29365.1| 1222|Anopheles gambiae protein ( Anopheles ...    23   7.8  
CR954257-2|CAJ14153.1| 1664|Anopheles gambiae Tubby protein.           23   7.8  
AJ438610-1|CAD27473.1|  838|Anopheles gambiae putative microtubu...    23   7.8  

>AJ271193-1|CAB66001.1| 1623|Anopheles gambiae laminin gamma 1
           precursor protein.
          Length = 1623

 Score = 29.1 bits (62), Expect = 0.16
 Identities = 14/35 (40%), Positives = 18/35 (51%)
 Frame = +1

Query: 586 PPNPCPVGYTEDQGCISEFENTAAFSREYQLSQRC 690
           PP  C   Y   Q CI EFEN AA+  + + +  C
Sbjct: 36  PPLECVDPYGRPQRCIPEFEN-AAYQLQVEATNTC 69


>AF487781-1|AAL96668.1|  533|Anopheles gambiae cytochrome P450
           CYP9L1 protein protein.
          Length = 533

 Score = 26.6 bits (56), Expect = 0.84
 Identities = 17/49 (34%), Positives = 25/49 (51%), Gaps = 4/49 (8%)
 Frame = -2

Query: 229 PIEPWGIKPMAATVFIAKSSMAYRPITKVKPDQTRYD----NDERHRQV 95
           P +P  + P  ATVFI  + + Y P  +  PD  R+D    NDE   ++
Sbjct: 414 PGDPDIVIPKGATVFIPIAGLHYDP--RFYPDPDRFDPERFNDENKHKI 460


>AF313909-1|AAL99382.1| 1024|Anopheles gambiae collagen IV alpha 1
           chain protein.
          Length = 1024

 Score = 25.8 bits (54), Expect = 1.5
 Identities = 13/31 (41%), Positives = 17/31 (54%)
 Frame = -3

Query: 573 GQNSVSFHHLSVRDHARWSETLSPSPAPPVT 481
           GQN+V  ++ S  D   W  T +P P  PVT
Sbjct: 863 GQNNVC-NYASRNDRTFWLSTSAPIPMMPVT 892


>EF117200-1|ABL67437.1|  421|Anopheles gambiae serpin 1 protein.
          Length = 421

 Score = 25.4 bits (53), Expect = 1.9
 Identities = 10/18 (55%), Positives = 13/18 (72%)
 Frame = +2

Query: 233 KGSFNNGTLLREVVERMG 286
           K  FN GTLL E ++R+G
Sbjct: 302 KFRFNYGTLLNEAIQRLG 319


>DQ974160-1|ABJ52800.1|  235|Anopheles gambiae serpin 1 protein.
          Length = 235

 Score = 25.4 bits (53), Expect = 1.9
 Identities = 10/18 (55%), Positives = 13/18 (72%)
 Frame = +2

Query: 233 KGSFNNGTLLREVVERMG 286
           K  FN GTLL E ++R+G
Sbjct: 116 KFRFNYGTLLNEAIQRLG 133


>M93691-2|AAA29365.1| 1222|Anopheles gambiae protein ( Anopheles
           gambiae RT2 retroposon. ).
          Length = 1222

 Score = 23.4 bits (48), Expect = 7.8
 Identities = 6/27 (22%), Positives = 16/27 (59%)
 Frame = -3

Query: 594 IGRVTIRGQNSVSFHHLSVRDHARWSE 514
           +G V ++   S+ +  + ++DH +W +
Sbjct: 779 VGDVEVQSSRSIRYLGVQLQDHLKWRD 805


>CR954257-2|CAJ14153.1| 1664|Anopheles gambiae Tubby protein.
          Length = 1664

 Score = 23.4 bits (48), Expect = 7.8
 Identities = 9/25 (36%), Positives = 15/25 (60%)
 Frame = -1

Query: 518  RRRSHPRQHRLLRTDGPTTNCAAST 444
            R+ +H +Q +  +  G  T C+AST
Sbjct: 1285 RKSNHQQQQQQQQVPGSGTECSAST 1309


>AJ438610-1|CAD27473.1|  838|Anopheles gambiae putative microtubule
           binding protein protein.
          Length = 838

 Score = 23.4 bits (48), Expect = 7.8
 Identities = 9/17 (52%), Positives = 12/17 (70%)
 Frame = +1

Query: 301 RGVQLPRVPGQRPPSRP 351
           +G+Q P + GQ PP RP
Sbjct: 252 QGMQRPPMMGQPPPIRP 268


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 830,759
Number of Sequences: 2352
Number of extensions: 17508
Number of successful extensions: 98
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 97
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 98
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 79418373
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)