Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= br--1450
         (676 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

01_01_0583 - 4321992-4322165,4322261-4322353,4322445-4322828,432...    31   0.84 
07_03_1619 + 28174991-28175804,28175945-28175968,28176075-281761...    30   1.5  
07_03_1268 + 25328448-25328506,25328589-25328768,25328872-253289...    29   2.6  
07_01_1025 + 8861153-8861376,8861929-8863027                           29   4.5  
01_06_1406 - 37073548-37073822,37073892-37074111,37074200-370742...    28   5.9  

>01_01_0583 -
           4321992-4322165,4322261-4322353,4322445-4322828,
           4322909-4322993,4323206-4323444,4323542-4323747,
           4324052-4324163
          Length = 430

 Score = 31.1 bits (67), Expect = 0.84
 Identities = 27/108 (25%), Positives = 44/108 (40%)
 Frame = +1

Query: 316 CTPLSLASQAAARLPGPEQSETVPS*RAQTSSGRSYFCYAARESSAGQGFVPHTERQPDT 495
           C P    +  AA+L G       P      SSG +   Y    +S+ Q +   TE+Q   
Sbjct: 8   CKPTDTGT--AAKLGGSTMQSLKPGKYINKSSGNASTKYRRAGASSPQLY---TEKQSAP 62

Query: 496 RPGVYLNEKFQDSLTLNSDTDSLVAKISAMFPTVSETHIKLLLKKYYN 639
           + G ++   F DS  +++       KI+     + E   K L +K +N
Sbjct: 63  KDGSFMEALFHDSKNVSARPPCHSGKIALQLFPIDEEFQKSLQQKNHN 110


>07_03_1619 +
           28174991-28175804,28175945-28175968,28176075-28176170,
           28176285-28176466,28176623-28176836,28177262-28177499,
           28177709-28177865,28177950-28178246
          Length = 673

 Score = 30.3 bits (65), Expect = 1.5
 Identities = 16/38 (42%), Positives = 19/38 (50%), Gaps = 1/38 (2%)
 Frame = +1

Query: 427 CYAARESSAGQGFVPHTERQPDTRPGVYL-NEKFQDSL 537
           CYA   S+A  G VP  E  P T  G Y  N  +Q +L
Sbjct: 15  CYAPTSSTAAGGEVPFYEDCPSTADGTYAPNSTYQSNL 52


>07_03_1268 +
           25328448-25328506,25328589-25328768,25328872-25328974,
           25329095-25329119,25329587-25329614,25330603-25330755,
           25331339-25333421,25333666-25334983,25335256-25335339,
           25335756-25335769
          Length = 1348

 Score = 29.5 bits (63), Expect = 2.6
 Identities = 19/51 (37%), Positives = 25/51 (49%)
 Frame = -1

Query: 511 DRHPAWYRAASRCEAQSPAQHWTLLRRSKSTSVQMRFEPFRMEQFRTALGL 359
           DRH    + A+  E    AQ  T  RR KST VQ+   P R+ + +  L L
Sbjct: 702 DRHDELQKKANELEKLFAAQKLTSSRRGKSTDVQVENTP-RVNEVKPPLVL 751


>07_01_1025 + 8861153-8861376,8861929-8863027
          Length = 440

 Score = 28.7 bits (61), Expect = 4.5
 Identities = 16/50 (32%), Positives = 27/50 (54%), Gaps = 1/50 (2%)
 Frame = +1

Query: 484 QPDTRPGVYLN-EKFQDSLTLNSDTDSLVAKISAMFPTVSETHIKLLLKK 630
           +PD  PGVY+N + F + +  N  +D L   +     T +E  ++LL K+
Sbjct: 390 RPDGHPGVYMNRDPFANGVDENMFSDCLHFCLPGPVDTFNEILVQLLKKR 439


>01_06_1406 -
           37073548-37073822,37073892-37074111,37074200-37074246,
           37074404-37074576,37075161-37075238,37075751-37075813,
           37075889-37075961,37076150-37076189,37076302-37076368,
           37076719-37078472,37079128-37079230,37080041-37080078,
           37080221-37080347,37081944-37082152
          Length = 1088

 Score = 28.3 bits (60), Expect = 5.9
 Identities = 13/39 (33%), Positives = 21/39 (53%)
 Frame = +2

Query: 236 TQDSAESAHHIALDCIQPQTTHGSPYHVHPYPSPVRLQH 352
           T+D + +   IAL C++P+   G P     YP+P   +H
Sbjct: 320 TEDLSTALSPIALTCMEPKKKRGRP---RKYPAPSNSKH 355


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,463,619
Number of Sequences: 37544
Number of extensions: 399539
Number of successful extensions: 1095
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 1044
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1094
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1714968940
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)