Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= br--1448
         (740 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF227923-1|AAF36721.1|  351|Tribolium castaneum abdominal-B prot...    25   0.64 
AM292380-1|CAL23192.2|  489|Tribolium castaneum gustatory recept...    22   4.5  
AM292346-1|CAL23158.2|  314|Tribolium castaneum gustatory recept...    22   4.5  
DQ138189-1|ABA03053.1|  162|Tribolium castaneum bursicon protein.      22   6.0  
AM292337-1|CAL23149.2|  452|Tribolium castaneum gustatory recept...    22   6.0  
AM292379-1|CAL23191.2|  376|Tribolium castaneum gustatory recept...    21   7.9  

>AF227923-1|AAF36721.1|  351|Tribolium castaneum abdominal-B
           protein.
          Length = 351

 Score = 25.0 bits (52), Expect = 0.64
 Identities = 16/41 (39%), Positives = 21/41 (51%), Gaps = 2/41 (4%)
 Frame = +3

Query: 105 KYYYGATRK*FGSEDNLISICFCRWSSR--CGYSSFSPASR 221
           +Y Y A     G  D  +S C   +SS   C YS++S ASR
Sbjct: 120 EYKYSAAAP--GPSDPSVSSCHQGFSSSTWCNYSAYSSASR 158


>AM292380-1|CAL23192.2|  489|Tribolium castaneum gustatory receptor
           candidate 59 protein.
          Length = 489

 Score = 22.2 bits (45), Expect = 4.5
 Identities = 7/12 (58%), Positives = 8/12 (66%)
 Frame = -3

Query: 108 IFCENYFCLCSY 73
           IFC  YFC+  Y
Sbjct: 253 IFCSLYFCIFGY 264


>AM292346-1|CAL23158.2|  314|Tribolium castaneum gustatory receptor
           candidate 25 protein.
          Length = 314

 Score = 22.2 bits (45), Expect = 4.5
 Identities = 7/12 (58%), Positives = 8/12 (66%)
 Frame = -3

Query: 108 IFCENYFCLCSY 73
           IFC  YFC+  Y
Sbjct: 78  IFCSLYFCIFGY 89


>DQ138189-1|ABA03053.1|  162|Tribolium castaneum bursicon protein.
          Length = 162

 Score = 21.8 bits (44), Expect = 6.0
 Identities = 8/18 (44%), Positives = 10/18 (55%)
 Frame = -2

Query: 607 YR*CIEKPIVDFICLLFC 554
           Y  C+ KPI  F C+  C
Sbjct: 52  YPGCVPKPIPSFACIGRC 69


>AM292337-1|CAL23149.2|  452|Tribolium castaneum gustatory receptor
           candidate 16 protein.
          Length = 452

 Score = 21.8 bits (44), Expect = 6.0
 Identities = 8/22 (36%), Positives = 14/22 (63%)
 Frame = +3

Query: 375 ISYGILQFATFEKLTDMCQSAD 440
           + YG+  F   + +TD+CQ A+
Sbjct: 297 VLYGLELFILAKIVTDLCQEAN 318


>AM292379-1|CAL23191.2|  376|Tribolium castaneum gustatory receptor
           candidate 58 protein.
          Length = 376

 Score = 21.4 bits (43), Expect = 7.9
 Identities = 13/26 (50%), Positives = 14/26 (53%)
 Frame = +2

Query: 641 KGLIPTLGQIAPHAGIQFCCLQTLLL 718
           KGL PTL   A H    FC L  L+L
Sbjct: 159 KGL-PTLKLFALHEFYGFCYLWVLIL 183


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 170,068
Number of Sequences: 336
Number of extensions: 3686
Number of successful extensions: 11
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 19884055
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)