Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= br--1448
(740 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPBC1604.04 |||thiamine pyrophosphate transporter|Schizosaccharo... 44 3e-05
SPAC328.09 |||2-oxoadipate and 2-oxoglutarate transporter |Schiz... 43 5e-05
SPCC1682.09c |||guanine nucleotide transporter|Schizosaccharomyc... 42 7e-05
SPAC19G12.05 |||mitochondrial citrate transporter|Schizosaccharo... 40 5e-04
SPBC12D12.05c |||mitochondrial carrier, calcium binding subfamil... 40 5e-04
SPAC139.02c |oac1||anion transporter|Schizosaccharomyces pombe|c... 39 7e-04
SPAC4G9.20c |||mitochondrial carrier with solute carrier repeats... 39 9e-04
SPBP23A10.06 |||manganese ion transporter |Schizosaccharomyces p... 38 0.001
SPAC688.09 |||pyrimidine nucletide transporter |Schizosaccharomy... 33 0.032
SPAPB17E12.12c |||mitochondrial transporter|Schizosaccharomyces ... 32 0.075
SPBC27B12.09c |||FAD transporter|Schizosaccharomyces pombe|chr 2... 32 0.075
SPAC12B10.09 |||S-adenosylmethionine transporter |Schizosaccharo... 31 0.13
SPAC227.03c |||mitochondrial NAD+ transporter|Schizosaccharomyce... 29 0.53
SPCC1442.03 ||SPCC1450.19|ATP-Mg/Pi carrier homolog|Schizosaccha... 28 1.2
SPAC8C9.12c |||iron ion transporter |Schizosaccharomyces pombe|c... 28 1.2
SPAC1486.10 |thi1|ntf1, SPAC6G10.01|transcription factor Thi1|Sc... 28 1.6
SPBC530.10c |anc1||adenine nucleotide carrier Anc1|Schizosacchar... 28 1.6
SPAC1B2.02c |ugo1||mitochondrial fusion and transport protein Ug... 27 2.8
SPBC31F10.14c |hip3|hir3|HIRA interacting protein Hip3|Schizosac... 27 3.7
SPBP8B7.19 |spt16||FACT complex component Spt16|Schizosaccharomy... 26 4.9
SPBC17A3.04c |||methionine-tRNA ligase |Schizosaccharomyces pomb... 26 4.9
SPAC30D11.02c |||sequence orphan|Schizosaccharomyces pombe|chr 1... 26 6.5
SPAC24B11.12c |||P-type ATPase |Schizosaccharomyces pombe|chr 1|... 25 8.6
SPAC343.07 |mug28||RNA-binding protein Mug28|Schizosaccharomyces... 25 8.6
>SPBC1604.04 |||thiamine pyrophosphate
transporter|Schizosaccharomyces pombe|chr 2|||Manual
Length = 314
Score = 43.6 bits (98), Expect = 3e-05
Identities = 23/75 (30%), Positives = 38/75 (50%)
Frame = +3
Query: 285 SSILQALGSIIREEGVATLWSGHIPAQLLSISYGILQFATFEKLTDMCQSADRQFYTNHK 464
SS+ +++EGV LW G++ A+LL + YG +F F KL + ++ +
Sbjct: 49 SSLRPVFKETVQKEGVRALWRGNVVAELLYLVYGAAEFVAFSKLKHLTEN-----LAMND 103
Query: 465 HWINFCNGSIAATVA 509
H +NF G+ A A
Sbjct: 104 HAVNFLCGTSAGIFA 118
Score = 30.7 bits (66), Expect = 0.23
Identities = 21/62 (33%), Positives = 31/62 (50%)
Frame = +2
Query: 509 TVASFPFDTVRTRLIAEQKTNKVYNGFLNALSVMIKTEGPVVLFKGLIPTLGQIAPHAGI 688
T+ S+P DT+RT+ + KT + L A + G F GL ++ QI P+AG
Sbjct: 119 TLTSYPLDTMRTKFASYAKTPHM----LPATKKIYAEAGIKGFFPGLKFSVIQIGPYAGC 174
Query: 689 QF 694
F
Sbjct: 175 FF 176
>SPAC328.09 |||2-oxoadipate and 2-oxoglutarate transporter
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 298
Score = 42.7 bits (96), Expect = 5e-05
Identities = 21/64 (32%), Positives = 38/64 (59%), Gaps = 1/64 (1%)
Frame = +2
Query: 521 FPFDTVRTRL-IAEQKTNKVYNGFLNALSVMIKTEGPVVLFKGLIPTLGQIAPHAGIQFC 697
+P D V+TR+ ++ K++ YNG + L ++K EGP L++G++P + AP ++F
Sbjct: 27 YPLDVVKTRMQLSVGKSD--YNGTFDCLKKIVKNEGPHRLYRGILPPILMEAPKRALKFA 84
Query: 698 CLQT 709
T
Sbjct: 85 SNDT 88
Score = 27.9 bits (59), Expect = 1.6
Identities = 17/42 (40%), Positives = 22/42 (52%), Gaps = 1/42 (2%)
Frame = +3
Query: 270 QGSKYSSILQALGSIIREEGVATLWSGHIPAQL-LSISYGIL 392
Q KY+ AL ++ REEG L+ G +P L L GIL
Sbjct: 236 QVPKYNWAYPALVTVAREEGFTALYKGFVPKVLRLGPGGGIL 277
>SPCC1682.09c |||guanine nucleotide transporter|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 300
Score = 42.3 bits (95), Expect = 7e-05
Identities = 25/68 (36%), Positives = 33/68 (48%)
Frame = +2
Query: 512 VASFPFDTVRTRLIAEQKTNKVYNGFLNALSVMIKTEGPVVLFKGLIPTLGQIAPHAGIQ 691
+ S P D ++TR I + + +GF L M+K EGP FKGL P L P
Sbjct: 227 IVSAPLDVIKTR-IQNKNFDNPQSGF-TILKNMLKFEGPTSFFKGLTPKLLTTGPKLVFS 284
Query: 692 FCCLQTLL 715
F QTL+
Sbjct: 285 FTMAQTLI 292
>SPAC19G12.05 |||mitochondrial citrate
transporter|Schizosaccharomyces pombe|chr 1|||Manual
Length = 291
Score = 39.5 bits (88), Expect = 5e-04
Identities = 18/64 (28%), Positives = 38/64 (59%), Gaps = 1/64 (1%)
Frame = +2
Query: 524 PFDTVRTRLIAEQKT-NKVYNGFLNALSVMIKTEGPVVLFKGLIPTLGQIAPHAGIQFCC 700
PF++++T +I ++K N GFL A +++ G L++GL T+ + A ++G++F
Sbjct: 124 PFESIKTAIIDDRKRPNPRLKGFLQASRIIVHENGIRGLYRGLAATVARQAANSGVRFTA 183
Query: 701 LQTL 712
++
Sbjct: 184 YNSI 187
Score = 30.7 bits (66), Expect = 0.23
Identities = 15/68 (22%), Positives = 31/68 (45%)
Frame = +3
Query: 222 CSEDKISTSSRPITDKQGSKYSSILQALGSIIREEGVATLWSGHIPAQLLSISYGILQFA 401
C++ + SR + +Y + + I+ ++G+ WSG P I G + F
Sbjct: 220 CTQPIDTVKSRMQSLSASKEYKNSIHCAYKILTQDGLLRFWSGATPRLARLILSGGIVFT 279
Query: 402 TFEKLTDM 425
+EK+ ++
Sbjct: 280 VYEKVMEI 287
>SPBC12D12.05c |||mitochondrial carrier, calcium binding
subfamily|Schizosaccharomyces pombe|chr 2|||Manual
Length = 426
Score = 39.5 bits (88), Expect = 5e-04
Identities = 21/60 (35%), Positives = 32/60 (53%), Gaps = 2/60 (3%)
Frame = +2
Query: 521 FPFDTVRTRLIAEQKTNK--VYNGFLNALSVMIKTEGPVVLFKGLIPTLGQIAPHAGIQF 694
FP + +RTRL + + Y+GF++ K EG L+KGL P L ++AP I +
Sbjct: 354 FPLNVIRTRLQTQGTSAHPATYDGFIDCFYKTTKNEGFRGLYKGLSPNLLKVAPSVAISY 413
>SPAC139.02c |oac1||anion transporter|Schizosaccharomyces pombe|chr
1|||Manual
Length = 320
Score = 39.1 bits (87), Expect = 7e-04
Identities = 20/51 (39%), Positives = 30/51 (58%)
Frame = +2
Query: 527 FDTVRTRLIAEQKTNKVYNGFLNALSVMIKTEGPVVLFKGLIPTLGQIAPH 679
FDTV TR+ QK ++Y ++ + I++EG L+KG L +IAPH
Sbjct: 250 FDTVMTRMY-NQKNKELYKNPIDCILKTIRSEGFFALYKGFGAHLARIAPH 299
>SPAC4G9.20c |||mitochondrial carrier with solute carrier
repeats|Schizosaccharomyces pombe|chr 1|||Manual
Length = 302
Score = 38.7 bits (86), Expect = 9e-04
Identities = 21/58 (36%), Positives = 32/58 (55%), Gaps = 1/58 (1%)
Frame = +2
Query: 524 PFDTVRTRLIAEQKTNKVYNGFLNALSVMIKTEGPVVLFKG-LIPTLGQIAPHAGIQF 694
PFD V+ RL ++ + +YN L+ + + K EG +KG ++P LG I IQF
Sbjct: 37 PFDCVKVRLQSQSNVSPIYNNALDCVKKISKNEGLAAFYKGTVLPLLG-IGFCVSIQF 93
>SPBP23A10.06 |||manganese ion transporter |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 335
Score = 38.3 bits (85), Expect = 0.001
Identities = 23/73 (31%), Positives = 33/73 (45%)
Frame = +3
Query: 198 SSFSPASRCSEDKISTSSRPITDKQGSKYSSILQALGSIIREEGVATLWSGHIPAQLLSI 377
S +S S KI RP G S + Q I R EGV +LW G +P+ + +
Sbjct: 58 SQYSSTQPISSAKILGKGRPAPKPLGGPVSGLYQ----IARHEGVRSLWRGLVPSLTMLL 113
Query: 378 SYGILQFATFEKL 416
+QF +E+L
Sbjct: 114 PANTVQFLGYEQL 126
Score = 28.3 bits (60), Expect = 1.2
Identities = 15/48 (31%), Positives = 26/48 (54%)
Frame = +2
Query: 572 KVYNGFLNALSVMIKTEGPVVLFKGLIPTLGQIAPHAGIQFCCLQTLL 715
K G ++ L + + EG L++GL+P+L + P +QF + LL
Sbjct: 80 KPLGGPVSGLYQIARHEGVRSLWRGLVPSLTMLLPANTVQFLGYEQLL 127
>SPAC688.09 |||pyrimidine nucletide transporter |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 361
Score = 33.5 bits (73), Expect = 0.032
Identities = 24/91 (26%), Positives = 40/91 (43%), Gaps = 9/91 (9%)
Frame = +2
Query: 470 DQLLQWFNRSNRCTVASF-------PFDTVRTRLIAEQKTNKV--YNGFLNALSVMIKTE 622
D++L W + +A F P + VRTRL N Y G + ++ +
Sbjct: 267 DKVLDWGGKLGGAGIAKFMAAGIAYPHEVVRTRLRQSPSINGTPKYTGLIQCFKLVWMEQ 326
Query: 623 GPVVLFKGLIPTLGQIAPHAGIQFCCLQTLL 715
G V L+ GL L ++ P+A I F + ++
Sbjct: 327 GIVGLYGGLTAHLLRVVPNACILFGSYEVIM 357
>SPAPB17E12.12c |||mitochondrial transporter|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 317
Score = 32.3 bits (70), Expect = 0.075
Identities = 19/67 (28%), Positives = 31/67 (46%), Gaps = 1/67 (1%)
Frame = +3
Query: 267 KQGSKYSSILQALGSIIREEGVATLWSGHIPAQLLSISYGILQFATFEKLTDMC-QSADR 443
+ +Y+S+ L I EG+ + G+ L + YG +QFATF L ++
Sbjct: 51 QNNKEYTSLTSTLVKIWNREGLIGFFRGNGTNCLRAFPYGAVQFATFNMLKQRALKNRSH 110
Query: 444 QFYTNHK 464
Q NH+
Sbjct: 111 QNLENHE 117
Score = 26.6 bits (56), Expect = 3.7
Identities = 14/58 (24%), Positives = 25/58 (43%)
Frame = +2
Query: 539 RTRLIAEQKTNKVYNGFLNALSVMIKTEGPVVLFKGLIPTLGQIAPHAGIQFCCLQTL 712
R ++I + + NK Y + L + EG + F+G + P+ +QF L
Sbjct: 43 RMKIIFQVQNNKEYTSLTSTLVKIWNREGLIGFFRGNGTNCLRAFPYGAVQFATFNML 100
>SPBC27B12.09c |||FAD transporter|Schizosaccharomyces pombe|chr
2|||Manual
Length = 277
Score = 32.3 bits (70), Expect = 0.075
Identities = 15/35 (42%), Positives = 23/35 (65%)
Frame = +3
Query: 312 IIREEGVATLWSGHIPAQLLSISYGILQFATFEKL 416
+I+ EG+ ++G P+ LL +S G LQF +EKL
Sbjct: 143 LIKNEGLRGCYAGFAPS-LLGVSQGALQFMAYEKL 176
>SPAC12B10.09 |||S-adenosylmethionine transporter
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 345
Score = 31.5 bits (68), Expect = 0.13
Identities = 16/64 (25%), Positives = 33/64 (51%)
Frame = +2
Query: 524 PFDTVRTRLIAEQKTNKVYNGFLNALSVMIKTEGPVVLFKGLIPTLGQIAPHAGIQFCCL 703
PFD V+TR++ Q+ ++ + ++ EG + L+KG++P + ++ I C
Sbjct: 278 PFDVVKTRIMTSQQRLS----YVFTIKSIVAHEGFLALYKGIVPRVLWLSGGGAIFLGCY 333
Query: 704 QTLL 715
+L
Sbjct: 334 DVIL 337
>SPAC227.03c |||mitochondrial NAD+ transporter|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 371
Score = 29.5 bits (63), Expect = 0.53
Identities = 16/40 (40%), Positives = 22/40 (55%), Gaps = 1/40 (2%)
Frame = +2
Query: 578 YNGFLNALSVMIKTEGPVVLFKGLIPTL-GQIAPHAGIQF 694
YN +A + K EG ++GL P+L G + H GIQF
Sbjct: 230 YNNTFDAFRKIYKYEGLAAFYRGLFPSLFGTL--HVGIQF 267
>SPCC1442.03 ||SPCC1450.19|ATP-Mg/Pi carrier
homolog|Schizosaccharomyces pombe|chr 3|||Manual
Length = 338
Score = 28.3 bits (60), Expect = 1.2
Identities = 15/50 (30%), Positives = 24/50 (48%)
Frame = +3
Query: 282 YSSILQALGSIIREEGVATLWSGHIPAQLLSISYGILQFATFEKLTDMCQ 431
Y S A+ I ++EG+ T + G+ L I + Q +EKL + Q
Sbjct: 155 YPSFRGAVKQIAKQEGMKTFFYGYRATILRDIPFSGFQLLFYEKLRQVAQ 204
>SPAC8C9.12c |||iron ion transporter |Schizosaccharomyces pombe|chr
1|||Manual
Length = 303
Score = 28.3 bits (60), Expect = 1.2
Identities = 12/44 (27%), Positives = 22/44 (50%)
Frame = +3
Query: 279 KYSSILQALGSIIREEGVATLWSGHIPAQLLSISYGILQFATFE 410
KY S L ++ R EG+ + + +SI + +Q AT++
Sbjct: 147 KYKSALHCATTVFRNEGLGAFYISYPTCIAMSIPFTAIQVATYD 190
>SPAC1486.10 |thi1|ntf1, SPAC6G10.01|transcription factor
Thi1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 775
Score = 27.9 bits (59), Expect = 1.6
Identities = 14/43 (32%), Positives = 23/43 (53%)
Frame = -1
Query: 704 VNSKIGYLHEVLFAPMLELNL*KEPQVPLSLSLQIMH*ETHCR 576
+N +IG+L LFA + +L K+ +VP ++ HCR
Sbjct: 1 MNEEIGFLKNQLFADVKDLERKKKRRVPPEQRRRVFRACKHCR 43
>SPBC530.10c |anc1||adenine nucleotide carrier
Anc1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 322
Score = 27.9 bits (59), Expect = 1.6
Identities = 14/45 (31%), Positives = 21/45 (46%)
Frame = +2
Query: 512 VASFPFDTVRTRLIAEQKTNKVYNGFLNALSVMIKTEGPVVLFKG 646
VAS+P DT+R R++ Y+ ++ EG FKG
Sbjct: 248 VASYPLDTIRRRMMMTSGEAVKYSSSFECGRQILAKEGARSFFKG 292
Score = 25.4 bits (53), Expect = 8.6
Identities = 15/49 (30%), Positives = 20/49 (40%)
Frame = +3
Query: 279 KYSSILQALGSIIREEGVATLWSGHIPAQLLSISYGILQFATFEKLTDM 425
+Y I + EEGV +LW G+ L L FA +K M
Sbjct: 70 RYKGIGECFKRTAAEEGVISLWRGNTANVLRYFPTQALNFAFKDKFKKM 118
>SPAC1B2.02c |ugo1||mitochondrial fusion and transport protein
Ugo1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 421
Score = 27.1 bits (57), Expect = 2.8
Identities = 14/40 (35%), Positives = 20/40 (50%)
Frame = +3
Query: 276 SKYSSILQALGSIIREEGVATLWSGHIPAQLLSISYGILQ 395
SK SI + + +EG LW GH + L ++ Y LQ
Sbjct: 151 SKRFSIKSIISELWEKEGARGLWKGHTISFLHNLLYSGLQ 190
>SPBC31F10.14c |hip3|hir3|HIRA interacting protein
Hip3|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1630
Score = 26.6 bits (56), Expect = 3.7
Identities = 9/18 (50%), Positives = 11/18 (61%)
Frame = -2
Query: 670 YLPQCWN*TFKKNHRSLC 617
YL QCW FKK ++C
Sbjct: 501 YLQQCWGKIFKKKFTTIC 518
>SPBP8B7.19 |spt16||FACT complex component Spt16|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 1019
Score = 26.2 bits (55), Expect = 4.9
Identities = 15/42 (35%), Positives = 26/42 (61%), Gaps = 1/42 (2%)
Frame = -2
Query: 325 SSLIIEPRA-CKIELYFEPCLSVIGLLEVEILSSEHLEAGLK 203
S+++++P C ++L P +VI L E+EI E ++ GLK
Sbjct: 820 SNVLLQPTTDCLVQLTDTP-FTVITLNEIEIAHLERVQFGLK 860
>SPBC17A3.04c |||methionine-tRNA ligase |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 782
Score = 26.2 bits (55), Expect = 4.9
Identities = 18/67 (26%), Positives = 30/67 (44%)
Frame = +3
Query: 198 SSFSPASRCSEDKISTSSRPITDKQGSKYSSILQALGSIIREEGVATLWSGHIPAQLLSI 377
S+FS C S R + K+ KY S A+ S + + L++ I ++L +
Sbjct: 29 SAFSVKVPCEGAANCNSVRLVNSKEPEKYVSDANAIVSFLYWKQEEDLFNSFISSKLSIL 88
Query: 378 SYGILQF 398
+ LQF
Sbjct: 89 DWEALQF 95
>SPAC30D11.02c |||sequence orphan|Schizosaccharomyces pombe|chr
1|||Manual
Length = 85
Score = 25.8 bits (54), Expect = 6.5
Identities = 17/43 (39%), Positives = 25/43 (58%), Gaps = 3/43 (6%)
Frame = +1
Query: 361 RNYYLYLTGSFNLRLSKN*LICVRVPIANFT---RIISTGSTF 480
R + Y +F+LR +KN LI V +PI F+ IS G++F
Sbjct: 40 RTHGHYCLLNFSLRENKNYLIIVYLPIEGFSANHMCISHGTSF 82
>SPAC24B11.12c |||P-type ATPase |Schizosaccharomyces pombe|chr
1|||Manual
Length = 1402
Score = 25.4 bits (53), Expect = 8.6
Identities = 20/59 (33%), Positives = 29/59 (49%), Gaps = 6/59 (10%)
Frame = -1
Query: 587 THCRLYLSSVLQLISFGLYRTEMKLLCNG-----CCD*TIA-KVDPVLMIRVKLAIGTL 429
+H + SVL+ + G RT+ LLC CC + A K D V ++R L + TL
Sbjct: 950 SHALVIDGSVLKRVLDGPMRTKFLLLCKRCKAVLCCRVSPAQKADVVQLVRESLEVMTL 1008
>SPAC343.07 |mug28||RNA-binding protein Mug28|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 609
Score = 25.4 bits (53), Expect = 8.6
Identities = 12/37 (32%), Positives = 19/37 (51%)
Frame = +2
Query: 416 N*YVSECRSPILHES*ALDQLLQWFNRSNRCTVASFP 526
N +V I+ + L++L F R CT+AS+P
Sbjct: 420 NLFVKNLDDNIVGNTQQLEELFSKFGRIKSCTLASYP 456
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,945,132
Number of Sequences: 5004
Number of extensions: 60250
Number of successful extensions: 189
Number of sequences better than 10.0: 24
Number of HSP's better than 10.0 without gapping: 169
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 188
length of database: 2,362,478
effective HSP length: 71
effective length of database: 2,007,194
effective search space used: 351258950
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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