Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= br--1447
         (747 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY071745-1|AAL49367.1|  150|Drosophila melanogaster RH49748p pro...    91   1e-18
AY070643-1|AAL48114.1|  150|Drosophila melanogaster RH02823p pro...    91   1e-18
AE014134-472|AAN10414.1|  126|Drosophila melanogaster CG2862-PB,...    91   1e-18
AE014134-471|AAF51208.2|  150|Drosophila melanogaster CG2862-PA,...    91   1e-18
AE014297-1694|AAF54953.1|   58|Drosophila melanogaster CG17025-P...    29   8.9  

>AY071745-1|AAL49367.1|  150|Drosophila melanogaster RH49748p
           protein.
          Length = 150

 Score = 91.5 bits (217), Expect = 1e-18
 Identities = 42/66 (63%), Positives = 50/66 (75%), Gaps = 1/66 (1%)
 Frame = +1

Query: 256 ARLQDAENNDNELLGHLMLVARSLGAQRA-PSGWRLVVNNGKDGAQSVYHLHLHVLGGRQ 432
           A+L  AE+ D +LLGHLMLV R +  +     G+R+V+NNGK GAQSVYHLHLH LGGRQ
Sbjct: 85  AQLSLAEDGDADLLGHLMLVGRKVAKELGLADGYRVVINNGKHGAQSVYHLHLHFLGGRQ 144

Query: 433 MGWPPG 450
           M WPPG
Sbjct: 145 MQWPPG 150



 Score = 48.4 bits (110), Expect = 1e-05
 Identities = 24/54 (44%), Positives = 34/54 (62%)
 Frame = +3

Query: 78  SDEVRRAHETTTTIGPTIFDKIISKEIRADIIYEDDLCLAFNDIAPQRQYIFLL 239
           + EV ++ +T      TIF KI+ KEI    I+EDD C+AF+D+APQ    FL+
Sbjct: 26  ASEVEKS-QTAAASEDTIFGKILRKEIPCKFIHEDDKCVAFHDVAPQAPTHFLV 78


>AY070643-1|AAL48114.1|  150|Drosophila melanogaster RH02823p
           protein.
          Length = 150

 Score = 91.5 bits (217), Expect = 1e-18
 Identities = 42/66 (63%), Positives = 50/66 (75%), Gaps = 1/66 (1%)
 Frame = +1

Query: 256 ARLQDAENNDNELLGHLMLVARSLGAQRA-PSGWRLVVNNGKDGAQSVYHLHLHVLGGRQ 432
           A+L  AE+ D +LLGHLMLV R +  +     G+R+V+NNGK GAQSVYHLHLH LGGRQ
Sbjct: 85  AQLSLAEDGDADLLGHLMLVGRKVAKELGLADGYRVVINNGKHGAQSVYHLHLHFLGGRQ 144

Query: 433 MGWPPG 450
           M WPPG
Sbjct: 145 MQWPPG 150



 Score = 48.4 bits (110), Expect = 1e-05
 Identities = 24/54 (44%), Positives = 34/54 (62%)
 Frame = +3

Query: 78  SDEVRRAHETTTTIGPTIFDKIISKEIRADIIYEDDLCLAFNDIAPQRQYIFLL 239
           + EV ++ +T      TIF KI+ KEI    I+EDD C+AF+D+APQ    FL+
Sbjct: 26  ASEVEKS-QTAAASEDTIFGKILRKEIPCKFIHEDDKCVAFHDVAPQAPTHFLV 78


>AE014134-472|AAN10414.1|  126|Drosophila melanogaster CG2862-PB,
           isoform B protein.
          Length = 126

 Score = 91.5 bits (217), Expect = 1e-18
 Identities = 42/66 (63%), Positives = 50/66 (75%), Gaps = 1/66 (1%)
 Frame = +1

Query: 256 ARLQDAENNDNELLGHLMLVARSLGAQRA-PSGWRLVVNNGKDGAQSVYHLHLHVLGGRQ 432
           A+L  AE+ D +LLGHLMLV R +  +     G+R+V+NNGK GAQSVYHLHLH LGGRQ
Sbjct: 61  AQLSLAEDGDADLLGHLMLVGRKVAKELGLADGYRVVINNGKHGAQSVYHLHLHFLGGRQ 120

Query: 433 MGWPPG 450
           M WPPG
Sbjct: 121 MQWPPG 126



 Score = 48.4 bits (110), Expect = 1e-05
 Identities = 24/54 (44%), Positives = 34/54 (62%)
 Frame = +3

Query: 78  SDEVRRAHETTTTIGPTIFDKIISKEIRADIIYEDDLCLAFNDIAPQRQYIFLL 239
           + EV ++ +T      TIF KI+ KEI    I+EDD C+AF+D+APQ    FL+
Sbjct: 2   ASEVEKS-QTAAASEDTIFGKILRKEIPCKFIHEDDKCVAFHDVAPQAPTHFLV 54


>AE014134-471|AAF51208.2|  150|Drosophila melanogaster CG2862-PA,
           isoform A protein.
          Length = 150

 Score = 91.5 bits (217), Expect = 1e-18
 Identities = 42/66 (63%), Positives = 50/66 (75%), Gaps = 1/66 (1%)
 Frame = +1

Query: 256 ARLQDAENNDNELLGHLMLVARSLGAQRA-PSGWRLVVNNGKDGAQSVYHLHLHVLGGRQ 432
           A+L  AE+ D +LLGHLMLV R +  +     G+R+V+NNGK GAQSVYHLHLH LGGRQ
Sbjct: 85  AQLSLAEDGDADLLGHLMLVGRKVAKELGLADGYRVVINNGKHGAQSVYHLHLHFLGGRQ 144

Query: 433 MGWPPG 450
           M WPPG
Sbjct: 145 MQWPPG 150



 Score = 48.4 bits (110), Expect = 1e-05
 Identities = 24/54 (44%), Positives = 34/54 (62%)
 Frame = +3

Query: 78  SDEVRRAHETTTTIGPTIFDKIISKEIRADIIYEDDLCLAFNDIAPQRQYIFLL 239
           + EV ++ +T      TIF KI+ KEI    I+EDD C+AF+D+APQ    FL+
Sbjct: 26  ASEVEKS-QTAAASEDTIFGKILRKEIPCKFIHEDDKCVAFHDVAPQAPTHFLV 78


>AE014297-1694|AAF54953.1|   58|Drosophila melanogaster CG17025-PA
           protein.
          Length = 58

 Score = 28.7 bits (61), Expect = 8.9
 Identities = 15/43 (34%), Positives = 26/43 (60%)
 Frame = -3

Query: 250 TLWNNKKMYWRCGAMSLKARHKSSSYMISALISLDMILSNIVG 122
           TLWN   +Y    A ++ +++ SS  ++S+  S + ILS +VG
Sbjct: 3   TLWNQDILYGFGFASTMHSKYASSPSLMSSGFSEEPILSVVVG 45


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 33,392,044
Number of Sequences: 53049
Number of extensions: 694580
Number of successful extensions: 1729
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 1671
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1725
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3396574665
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)