Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= br--1445
         (704 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY316682-1|AAQ83696.1|  456|Tribolium castaneum Sp-like zinc fin...    25   0.79 
AF217810-1|AAF71998.1|  431|Tribolium castaneum fork head orthol...    23   2.4  
AY055847-1|AAL23667.2|  312|Tribolium castaneum cephalothorax pr...    23   3.2  
AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory recept...    22   4.2  
AF264721-1|AAF75273.1|  126|Tribolium castaneum putative cytochr...    22   5.6  
EU019709-1|ABU25221.1|  540|Tribolium castaneum aspartate 1-deca...    21   7.4  
EF592536-1|ABQ95982.1|  598|Tribolium castaneum beta-N-acetylglu...    21   9.8  
AM292370-1|CAL23182.1|  418|Tribolium castaneum gustatory recept...    21   9.8  
AM292335-1|CAL23147.2|  374|Tribolium castaneum gustatory recept...    21   9.8  

>AY316682-1|AAQ83696.1|  456|Tribolium castaneum Sp-like zinc finger
           protein protein.
          Length = 456

 Score = 24.6 bits (51), Expect = 0.79
 Identities = 16/54 (29%), Positives = 26/54 (48%)
 Frame = +1

Query: 4   SSTPSTQTSGLGFGVSSAPSTQATGLSFGVSSAPSTQATALSFGVSSATTQPPS 165
           SS P+ +TS      +S P+  +  +    SS P+T +         AT+QPP+
Sbjct: 82  SSLPTQRTS------TSNPTYSSRSVMTSCSSVPTTASYGSDLYFPGATSQPPT 129


>AF217810-1|AAF71998.1|  431|Tribolium castaneum fork head
           orthologue protein.
          Length = 431

 Score = 23.0 bits (47), Expect = 2.4
 Identities = 12/32 (37%), Positives = 17/32 (53%), Gaps = 1/32 (3%)
 Frame = -3

Query: 651 SLFSCSNCFS-IGPNRSSNSFCCASTKSNSCS 559
           ++ + SN  S + P  S NS  C S  S +CS
Sbjct: 12  TMATSSNAMSPMTPTYSMNSMSCVSMPSMNCS 43


>AY055847-1|AAL23667.2|  312|Tribolium castaneum cephalothorax
           protein.
          Length = 312

 Score = 22.6 bits (46), Expect = 3.2
 Identities = 14/63 (22%), Positives = 24/63 (38%)
 Frame = +1

Query: 7   STPSTQTSGLGFGVSSAPSTQATGLSFGVSSAPSTQATALSFGVSSATTQPPSTGINFGT 186
           STP   T        S+  T    +S      P+T  T+ +    +++T   S+    GT
Sbjct: 125 STPPLSTPSNSNATKSSGLTSPLSVSTSPPGKPATSTTSQNLSSPASSTSSTSSTEKAGT 184

Query: 187 GTS 195
             +
Sbjct: 185 NNN 187


>AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory receptor
           candidate 46 protein.
          Length = 1451

 Score = 22.2 bits (45), Expect = 4.2
 Identities = 14/35 (40%), Positives = 20/35 (57%), Gaps = 1/35 (2%)
 Frame = -1

Query: 650 HCSLAVTVSPSVLIDLPILFVVPVQSL-IHVPVIA 549
           +CSLA+ V   +LI+     ++ V SL IHV   A
Sbjct: 415 YCSLAIFVLCELLIEGTTSILINVPSLIIHVSTSA 449


>AF264721-1|AAF75273.1|  126|Tribolium castaneum putative cytochrome
           P450 monooxigenaseCYP4Q2 protein.
          Length = 126

 Score = 21.8 bits (44), Expect = 5.6
 Identities = 10/28 (35%), Positives = 16/28 (57%)
 Frame = +2

Query: 620 MEKQLLQENNDRIKDPERGPMYSLAENL 703
           +++ +LQE  D + D    P YS  +NL
Sbjct: 18  VQETILQEMRDVLGDIHAKPTYSDLQNL 45


>EU019709-1|ABU25221.1|  540|Tribolium castaneum aspartate
           1-decarboxylase protein.
          Length = 540

 Score = 21.4 bits (43), Expect = 7.4
 Identities = 12/31 (38%), Positives = 14/31 (45%)
 Frame = +1

Query: 79  LSFGVSSAPSTQATALSFGVSSATTQPPSTG 171
           + FGV SAPST    L   +    T    TG
Sbjct: 101 MDFGVRSAPSTHEELLEV-LKKVVTYSVKTG 130


>EF592536-1|ABQ95982.1|  598|Tribolium castaneum
           beta-N-acetylglucosaminidase NAG1 protein.
          Length = 598

 Score = 21.0 bits (42), Expect = 9.8
 Identities = 10/23 (43%), Positives = 13/23 (56%)
 Frame = +1

Query: 58  PSTQATGLSFGVSSAPSTQATAL 126
           P T+ATGLS        ++A AL
Sbjct: 41  PDTEATGLSLPACRLFCSEAAAL 63


>AM292370-1|CAL23182.1|  418|Tribolium castaneum gustatory receptor
           candidate 49 protein.
          Length = 418

 Score = 21.0 bits (42), Expect = 9.8
 Identities = 6/10 (60%), Positives = 8/10 (80%)
 Frame = +3

Query: 531 RPLKTNSNHW 560
           +P + NSNHW
Sbjct: 151 KPKERNSNHW 160


>AM292335-1|CAL23147.2|  374|Tribolium castaneum gustatory receptor
           candidate 14 protein.
          Length = 374

 Score = 21.0 bits (42), Expect = 9.8
 Identities = 6/10 (60%), Positives = 8/10 (80%)
 Frame = +3

Query: 531 RPLKTNSNHW 560
           +P + NSNHW
Sbjct: 107 KPKERNSNHW 116


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 148,665
Number of Sequences: 336
Number of extensions: 2827
Number of successful extensions: 16
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 16
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 16
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 18634795
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)