Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= br--1445
(704 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
02_05_0366 - 28313190-28313601,28313759-28314225,28315044-283157... 36 0.041
12_01_0423 + 3337401-3337419,3337777-3338235,3338650-3338735,333... 34 0.13
12_02_0490 + 19639226-19639228,19639718-19640133,19640793-196408... 33 0.29
10_06_0105 - 10790092-10790323,10791092-10791234,10791322-107914... 32 0.39
12_02_0674 - 21745321-21746223,21746229-21747608 31 0.89
10_08_1022 + 22337332-22339398 31 0.89
12_02_0228 + 15903452-15903812,15904153-15904202,15904615-159047... 31 1.2
12_01_0425 + 3347804-3348284,3348544-3348759,3349038-3349588,334... 31 1.2
11_01_0242 - 1862106-1862210,1862302-1862320,1863082-1863257,186... 31 1.2
12_01_0239 - 1793612-1793716,1793808-1793826,1794424-1794599,179... 30 1.6
11_06_0767 + 27121761-27123335,27123701-27123910,27124843-271249... 30 2.1
12_02_1286 - 27555143-27555191,27555290-27555511,27555911-275561... 29 2.7
01_06_1393 - 36999631-36999723,37000244-37000393,37000413-370005... 29 2.7
06_03_0963 + 26368959-26369462,26370900-26371205 29 3.6
11_06_0632 + 25674807-25675477,25676472-25677861,25677948-256780... 29 4.8
03_02_0532 + 9255634-9257034,9257234-9257347,9257975-9258239,925... 29 4.8
12_01_0582 - 4752576-4752786,4752955-4753037,4753324-4753530,475... 28 6.3
06_01_0179 - 1388602-1389572,1390060-1390129,1390346-1390439,139... 28 6.3
05_04_0260 + 19501643-19503010 28 6.3
05_03_0458 + 14280953-14281866,14281964-14282912 28 6.3
02_05_0689 - 30937621-30937665,30938143-30938208,30938303-309383... 28 6.3
03_05_0480 + 24740567-24741559 28 8.3
03_02_0310 + 7315185-7316820,7318332-7318879 28 8.3
02_05_0622 + 30437533-30437577,30437694-30438177,30438301-304383... 28 8.3
02_05_0296 + 27639981-27640766 28 8.3
01_03_0121 - 12722492-12722920 28 8.3
>02_05_0366 -
28313190-28313601,28313759-28314225,28315044-28315782,
28316548-28316615,28316693-28316757,28316922-28320162,
28320239-28320301,28320756-28320824,28321020-28321055,
28322035-28322280,28322531-28322569,28322695-28322816,
28322921-28323004,28323100-28323235,28323486-28323535,
28323620-28323756,28323863-28323951,28324847-28324954,
28325080-28325163,28325841-28325888,28326036-28326153,
28328262-28328347
Length = 2168
Score = 35.5 bits (78), Expect = 0.041
Identities = 18/75 (24%), Positives = 39/75 (52%), Gaps = 2/75 (2%)
Frame = +2
Query: 485 TNSERREDVELNEAVETVKNEQQSLEHELDFVLAQQKELEDLLGP--MEKQLLQENNDRI 658
T ER++ V +E + ++++L+ +LDF+L Q + +L ++ +L + ND +
Sbjct: 141 TKDERKQKVFYKNQLELEERKKKALDKQLDFLLGQTERYSTMLAENLVDVRLQNQENDSL 200
Query: 659 KDPERGPMYSLAENL 703
+ +R EN+
Sbjct: 201 QTNQRSQQELAQENI 215
>12_01_0423 +
3337401-3337419,3337777-3338235,3338650-3338735,
3338974-3339022,3339225-3339533,3339555-3339710,
3339871-3340086,3340404-3340906,3341050-3341116,
3341215-3341272,3341561-3341699,3341840-3341956,
3342069-3342246,3342459-3343093
Length = 996
Score = 33.9 bits (74), Expect = 0.13
Identities = 21/65 (32%), Positives = 37/65 (56%), Gaps = 1/65 (1%)
Frame = +1
Query: 4 SSTPST-QTSGLGFGVSSAPSTQATGLSFGVSSAPSTQATALSFGVSSATTQPPSTGINF 180
++TP+ TS FG SSAP+ +TG FG S+ P ++ + G ++++ ++ NF
Sbjct: 270 TTTPAFGSTSTSVFGASSAPAFGSTG--FGSSTTPGFGSSGSTPGFGASSSGMSTSAFNF 327
Query: 181 GTGTS 195
G+ S
Sbjct: 328 GSSPS 332
Score = 29.1 bits (62), Expect = 3.6
Identities = 17/53 (32%), Positives = 27/53 (50%), Gaps = 1/53 (1%)
Frame = +1
Query: 31 GLGFGVSSAPSTQATGL-SFGVSSAPSTQATALSFGVSSATTQPPSTGINFGT 186
G FG +S P+ T SFG ++ P+ T +FG +S + S+ FG+
Sbjct: 241 GSTFGAASTPTFGTTTTPSFGATTTPAFGTTTPAFGSTSTSVFGASSAPAFGS 293
>12_02_0490 +
19639226-19639228,19639718-19640133,19640793-19640846,
19640983-19641045,19641122-19641365,19641634-19641706,
19641911-19641939
Length = 293
Score = 32.7 bits (71), Expect = 0.29
Identities = 15/43 (34%), Positives = 26/43 (60%)
Frame = +2
Query: 473 LGHITNSERREDVELNEAVETVKNEQQSLEHELDFVLAQQKEL 601
LG+ + +R DVE++E ++ ++N SLEH L+ L E+
Sbjct: 152 LGYACDGQRWSDVEVDEFIKLMRNPSASLEHLLNHPLLLPPEI 194
>10_06_0105 - 10790092-10790323,10791092-10791234,10791322-10791429,
10791796-10791903,10793133-10797686,10798347-10798461,
10799597-10799724,10799843-10800043,10800158-10800227,
10801233-10801314,10801433-10801556,10801761-10801778
Length = 1960
Score = 32.3 bits (70), Expect = 0.39
Identities = 17/53 (32%), Positives = 31/53 (58%)
Frame = +2
Query: 506 DVELNEAVETVKNEQQSLEHELDFVLAQQKELEDLLGPMEKQLLQENNDRIKD 664
+ EL + V ++ SLE +L V +++ELE+L+ E+Q +Q D+ +D
Sbjct: 1360 EAELADRVAALEAAIHSLEIDLARVNEEKEELEELIKSNEEQFVQVGTDKSRD 1412
>12_02_0674 - 21745321-21746223,21746229-21747608
Length = 760
Score = 31.1 bits (67), Expect = 0.89
Identities = 24/57 (42%), Positives = 29/57 (50%), Gaps = 2/57 (3%)
Frame = +1
Query: 4 SSTPST-QTSGLGFGVSSAPSTQATG-LSFGVSSAPSTQATALSFGVSSATTQPPST 168
S PST T L PST T LS S PST T+L +SS+T++ PST
Sbjct: 506 SQIPSTASTRELSTATGKIPSTPRTNPLSTATSKIPSTPRTSL---LSSSTSKIPST 559
>10_08_1022 + 22337332-22339398
Length = 688
Score = 31.1 bits (67), Expect = 0.89
Identities = 21/59 (35%), Positives = 33/59 (55%), Gaps = 1/59 (1%)
Frame = +1
Query: 1 VSSTPSTQTSGLGFGVSSAPSTQATGLSFGVSSAPSTQA-TALSFGVSSATTQPPSTGI 174
VS T S +GLG + + Q T ++ G+SSAP +A A +FG+ + P +TG+
Sbjct: 157 VSMTQSFP-NGLGLPGQALFAAQPTWIATGLSSAPCDRARQAYTFGLRTMVCLPLATGV 214
>12_02_0228 +
15903452-15903812,15904153-15904202,15904615-15904713,
15907146-15907415,15908045-15908125,15909033-15909599,
15909677-15910053,15910326-15911613
Length = 1030
Score = 30.7 bits (66), Expect = 1.2
Identities = 21/64 (32%), Positives = 34/64 (53%)
Frame = +1
Query: 4 SSTPSTQTSGLGFGVSSAPSTQATGLSFGVSSAPSTQATALSFGVSSATTQPPSTGINFG 183
+ST S Q+SG+ +AP + + L+ G SS+PS+ A + SS+ T S F
Sbjct: 702 TSTSSVQSSGIQEPAITAPFSTVSSLA-GGSSSPSSMIFAGATSQSSSITTSGSVPFQFS 760
Query: 184 TGTS 195
+ +S
Sbjct: 761 SQSS 764
>12_01_0425 +
3347804-3348284,3348544-3348759,3349038-3349588,
3349752-3349815,3349915-3349975,3350271-3350409,
3350561-3350677,3350794-3350971,3351218-3351828
Length = 805
Score = 30.7 bits (66), Expect = 1.2
Identities = 24/67 (35%), Positives = 38/67 (56%), Gaps = 3/67 (4%)
Frame = +1
Query: 4 SSTPST-QTSGLGFGVSSAPSTQATGLSFGVSSAPSTQATAL-SFGVSSATTQPPST-GI 174
++TP+ TS FG +SAP+ ++G FG S P+ A++ FG SS+ + ST
Sbjct: 69 TTTPAFGSTSPSLFGATSAPAFGSSG--FGSSGTPAFGASSTPGFGASSSASFGTSTSAF 126
Query: 175 NFGTGTS 195
+FG+ S
Sbjct: 127 SFGSSPS 133
Score = 30.7 bits (66), Expect = 1.2
Identities = 23/68 (33%), Positives = 32/68 (47%), Gaps = 4/68 (5%)
Frame = +1
Query: 4 SSTPSTQTSGL-GFGVSSAPSTQATGLSFGVSSAPSTQATALSFGVSSATTQPPSTGIN- 177
S TP+ S GFG SS+ S + +F S+PS TA +FG + T G
Sbjct: 98 SGTPAFGASSTPGFGASSSASFGTSTSAFSFGSSPSFGQTASTFGSTPFGTSTSPFGAQT 157
Query: 178 --FGTGTS 195
FG+ T+
Sbjct: 158 SPFGSQTA 165
>11_01_0242 -
1862106-1862210,1862302-1862320,1863082-1863257,
1863359-1863405,1864443-1865022
Length = 308
Score = 30.7 bits (66), Expect = 1.2
Identities = 18/59 (30%), Positives = 26/59 (44%), Gaps = 1/59 (1%)
Frame = +1
Query: 13 PSTQTSGLGFGVSSAPSTQ-ATGLSFGVSSAPSTQATALSFGVSSATTQPPSTGINFGT 186
PSTQ G G G + PSTQ G + PS+Q +G ++ P +G+
Sbjct: 66 PSTQPYGSGGGYGAPPSTQRPQSYGGGYGAPPSSQPYGAPYGAPPPSSAPYGAPGGYGS 124
Score = 27.9 bits (59), Expect = 8.3
Identities = 15/37 (40%), Positives = 19/37 (51%)
Frame = +1
Query: 4 SSTPSTQTSGLGFGVSSAPSTQATGLSFGVSSAPSTQ 114
+S+ S G G G + PSTQ G G + PSTQ
Sbjct: 48 TSSSSAPYYGGGGGYGAPPSTQPYGSGGGYGAPPSTQ 84
>12_01_0239 -
1793612-1793716,1793808-1793826,1794424-1794599,
1794701-1794747,1795760-1796291
Length = 292
Score = 30.3 bits (65), Expect = 1.6
Identities = 17/61 (27%), Positives = 27/61 (44%)
Frame = +1
Query: 4 SSTPSTQTSGLGFGVSSAPSTQATGLSFGVSSAPSTQATALSFGVSSATTQPPSTGINFG 183
+S+ S G G G + PSTQ G G + PS+Q +G ++ P +G
Sbjct: 48 TSSSSAPYYGGGGGYGAPPSTQPYGSGGGYGAPPSSQPYGAPYGAPPPSSAPYGAPGGYG 107
Query: 184 T 186
+
Sbjct: 108 S 108
>11_06_0767 + 27121761-27123335,27123701-27123910,27124843-27124911,
27125387-27125656,27126027-27126377,27126480-27126757,
27126887-27128330
Length = 1398
Score = 29.9 bits (64), Expect = 2.1
Identities = 24/73 (32%), Positives = 32/73 (43%)
Frame = -3
Query: 240 NSGRGNSFRSEG*SG*CTSSKIDSGARWLSSGRAYPETKRGSLGTWRGADTKTKPSRLRT 61
+ GRG R G G D R++S GR + +RG G R P R R+
Sbjct: 1169 SGGRGGRGRGFGGRGRSDRGPHD---RFISDGRGRYDNRRGFGGKGRDRSYSRSPDRGRS 1225
Query: 60 WRGTDTKSQTRGL 22
RG D +S +R L
Sbjct: 1226 -RGYDRRSGSRSL 1237
>12_02_1286 -
27555143-27555191,27555290-27555511,27555911-27556162,
27556683-27557062,27557202-27557311,27557864-27558033,
27558236-27558444,27558528-27558617,27559125-27559264,
27559356-27559463,27559626-27559716,27560736-27560852,
27561497-27561767,27561892-27562193,27562400-27562469,
27563464-27563702,27564613-27564846,27564943-27565179,
27565276-27565734
Length = 1249
Score = 29.5 bits (63), Expect = 2.7
Identities = 12/44 (27%), Positives = 28/44 (63%)
Frame = +2
Query: 503 EDVELNEAVETVKNEQQSLEHELDFVLAQQKELEDLLGPMEKQL 634
E+ L E + +++E+ ++E E+D + ++ELE +G E+++
Sbjct: 755 EENNLREKLRRLESEKSNIEEEIDRLEPVKEELETRIGKKEREV 798
>01_06_1393 -
36999631-36999723,37000244-37000393,37000413-37000500,
37001362-37001465,37003115-37003192,37004247-37004369,
37004508-37004615
Length = 247
Score = 29.5 bits (63), Expect = 2.7
Identities = 14/41 (34%), Positives = 22/41 (53%)
Frame = +2
Query: 509 VELNEAVETVKNEQQSLEHELDFVLAQQKELEDLLGPMEKQ 631
+ L V V Q SLE +L+ + QKE++ L ME++
Sbjct: 74 IRLEAEVAKVVETQTSLERQLELIETHQKEVDKALQSMEEE 114
>06_03_0963 + 26368959-26369462,26370900-26371205
Length = 269
Score = 29.1 bits (62), Expect = 3.6
Identities = 11/22 (50%), Positives = 13/22 (59%)
Frame = -3
Query: 168 GARWLSSGRAYPETKRGSLGTW 103
GA W+ SGR Y E + G TW
Sbjct: 101 GAGWVVSGRGYREYRLGDYSTW 122
>11_06_0632 +
25674807-25675477,25676472-25677861,25677948-25678083,
25678185-25678282,25678470-25678535,25678699-25678827,
25679570-25679746,25680576-25680614
Length = 901
Score = 28.7 bits (61), Expect = 4.8
Identities = 25/94 (26%), Positives = 36/94 (38%)
Frame = +2
Query: 392 RGEYQQMDLRIGRAGTDVHQPSYPD*CLGHITNSERREDVELNEAVETVKNEQQSLEHEL 571
+ E +D G A PSY D G SER + K Q LE E
Sbjct: 457 QAEVSSLDEMEGFAKDKSQMPSYDDNFFGEAEQSER------TSSDREEKERQARLEQEQ 510
Query: 572 DFVLAQQKELEDLLGPMEKQLLQENNDRIKDPER 673
+ L ++K+ E E++L Q+ + ER
Sbjct: 511 EMKLMEEKKREQRRLEKERELEQQKERERQAMER 544
>03_02_0532 +
9255634-9257034,9257234-9257347,9257975-9258239,
9258346-9258461
Length = 631
Score = 28.7 bits (61), Expect = 4.8
Identities = 17/52 (32%), Positives = 28/52 (53%), Gaps = 3/52 (5%)
Frame = +1
Query: 49 SSAPSTQATGLSFG---VSSAPSTQATALSFGVSSATTQPPSTGINFGTGTS 195
S+A S++ + S +S+ P+T A+ SF + + T PPST F + S
Sbjct: 50 SAAASSETSYFSLSGAAISANPATSASMPSFRLYNELTWPPSTACTFESSRS 101
>12_01_0582 -
4752576-4752786,4752955-4753037,4753324-4753530,
4755128-4755207,4756853-4756998,4757088-4757719
Length = 452
Score = 28.3 bits (60), Expect = 6.3
Identities = 17/65 (26%), Positives = 35/65 (53%)
Frame = +2
Query: 473 LGHITNSERREDVELNEAVETVKNEQQSLEHELDFVLAQQKELEDLLGPMEKQLLQENND 652
+G + + R+ + EL A E++++E L E+D L +KEL + +L +E ++
Sbjct: 131 IGELVDKRRKLEAELR-ANESLRDEIVQLRGEIDKHLVVRKELSAKSASIMHELTREQSN 189
Query: 653 RIKDP 667
+ + P
Sbjct: 190 KQQIP 194
>06_01_0179 -
1388602-1389572,1390060-1390129,1390346-1390439,
1390587-1390687,1391152-1391220,1391328-1391482,
1392193-1392241,1392611-1392739,1392825-1393580,
1394711-1394902
Length = 861
Score = 28.3 bits (60), Expect = 6.3
Identities = 16/39 (41%), Positives = 20/39 (51%)
Frame = +1
Query: 16 STQTSGLGFGVSSAPSTQATGLSFGVSSAPSTQATALSF 132
+T +SG GVSS + + LS G PST A SF
Sbjct: 102 TTNSSGPSIGVSSLVTDANSSLSGGAQLQPSTSMNADSF 140
>05_04_0260 + 19501643-19503010
Length = 455
Score = 28.3 bits (60), Expect = 6.3
Identities = 14/36 (38%), Positives = 22/36 (61%)
Frame = +1
Query: 61 STQATGLSFGVSSAPSTQATALSFGVSSATTQPPST 168
ST A+ + FG +S +T+ AL GV A T+P ++
Sbjct: 379 STGASWVVFGANSMVATKGGALCLGVVDAGTEPQTS 414
>05_03_0458 + 14280953-14281866,14281964-14282912
Length = 620
Score = 28.3 bits (60), Expect = 6.3
Identities = 15/41 (36%), Positives = 23/41 (56%)
Frame = +1
Query: 46 VSSAPSTQATGLSFGVSSAPSTQATALSFGVSSATTQPPST 168
+SS+P+T + S+G +S PS+ A SS +T ST
Sbjct: 4 ISSSPATASASSSYGPTSPPSSCRNAAPSPPSSNSTPTSST 44
Score = 27.9 bits (59), Expect = 8.3
Identities = 17/57 (29%), Positives = 31/57 (54%), Gaps = 1/57 (1%)
Frame = +1
Query: 1 VSSTPSTQTSGLGFGVSSAPST-QATGLSFGVSSAPSTQATALSFGVSSATTQPPST 168
+SS+P+T ++ +G +S PS+ + S S++ T +T + S TT PS+
Sbjct: 4 ISSSPATASASSSYGPTSPPSSCRNAAPSPPSSNSTPTSSTTPTVPPSLTTTSSPSS 60
>02_05_0689 -
30937621-30937665,30938143-30938208,30938303-30938356,
30938489-30938560,30938648-30938743,30939883-30939960,
30940485-30940564,30940662-30941343
Length = 390
Score = 28.3 bits (60), Expect = 6.3
Identities = 18/74 (24%), Positives = 32/74 (43%)
Frame = +2
Query: 476 GHITNSERREDVELNEAVETVKNEQQSLEHELDFVLAQQKELEDLLGPMEKQLLQENNDR 655
GH + S+ + + V+ E+ +E +LA L MEK++ +E +D
Sbjct: 291 GH-SMSDPGSTYRTRDEISGVRQERDPIERVRKLILAHDLATAAELKDMEKEIRKEVDDA 349
Query: 656 IKDPERGPMYSLAE 697
I + PM +E
Sbjct: 350 IAKAKESPMPDTSE 363
>03_05_0480 + 24740567-24741559
Length = 330
Score = 27.9 bits (59), Expect = 8.3
Identities = 13/34 (38%), Positives = 19/34 (55%)
Frame = -1
Query: 653 GHCSLAVTVSPSVLIDLPILFVVPVQSLIHVPVI 552
G + T S S L+D PI+ PV ++H P+I
Sbjct: 193 GEAGMLATESASYLVD-PIVTQPPVPEIVHTPLI 225
>03_02_0310 + 7315185-7316820,7318332-7318879
Length = 727
Score = 27.9 bits (59), Expect = 8.3
Identities = 17/52 (32%), Positives = 29/52 (55%)
Frame = +1
Query: 40 FGVSSAPSTQATGLSFGVSSAPSTQATALSFGVSSATTQPPSTGINFGTGTS 195
+GV+ T +T S G+ +A ++Q+T + + + T PP + NF T TS
Sbjct: 546 YGVTDYSVTGST--SKGILAAQASQSTDMR-SLQTPTITPPKSSFNFKTTTS 594
>02_05_0622 +
30437533-30437577,30437694-30438177,30438301-30438354,
30438565-30438789,30438891-30438943,30439591-30439714,
30439823-30440077,30440171-30440517,30440661-30441266,
30441504-30441546,30441624-30441757
Length = 789
Score = 27.9 bits (59), Expect = 8.3
Identities = 10/16 (62%), Positives = 11/16 (68%)
Frame = +2
Query: 266 VWHNGTGKNHSFDFNN 313
VWH GT K + FDF N
Sbjct: 485 VWHYGTIKKYEFDFQN 500
>02_05_0296 + 27639981-27640766
Length = 261
Score = 27.9 bits (59), Expect = 8.3
Identities = 15/56 (26%), Positives = 24/56 (42%)
Frame = +1
Query: 4 SSTPSTQTSGLGFGVSSAPSTQATGLSFGVSSAPSTQATALSFGVSSATTQPPSTG 171
++ P QT+GL S P++ + G +AP + SS P S+G
Sbjct: 11 TAPPQVQTAGLPAAASPGPASPHSPSEQGDKTAPGAATASTMTTASSGEPSPRSSG 66
>01_03_0121 - 12722492-12722920
Length = 142
Score = 27.9 bits (59), Expect = 8.3
Identities = 19/67 (28%), Positives = 26/67 (38%)
Frame = -3
Query: 210 EG*SG*CTSSKIDSGARWLSSGRAYPETKRGSLGTWRGADTKTKPSRLRTWRGTDTKSQT 31
EG SG SG +WL + PE + G + T GA ++ GT +
Sbjct: 55 EGSSGSNPLPSSRSGRQWLGARVVDPEARDGGVATGGGARSQEAGGGFGDGSGTAAHPKA 114
Query: 30 RGLRTWR 10
R WR
Sbjct: 115 ELKRGWR 121
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,389,985
Number of Sequences: 37544
Number of extensions: 331791
Number of successful extensions: 1268
Number of sequences better than 10.0: 26
Number of HSP's better than 10.0 without gapping: 1170
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1257
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1815633512
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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