Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= br--1445
(704 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U97191-1|AAB52432.1| 805|Caenorhabditis elegans Nuclear pore co... 41 8e-04
Z70284-12|CAB54278.1| 549|Caenorhabditis elegans Hypothetical p... 35 0.065
AL032643-6|CAA21657.1| 538|Caenorhabditis elegans Hypothetical ... 33 0.26
Z48582-8|CAB70201.1| 3178|Caenorhabditis elegans Hypothetical pr... 32 0.46
Z48544-10|CAB70192.1| 3178|Caenorhabditis elegans Hypothetical p... 32 0.46
U80846-3|AAC70890.1| 2232|Caenorhabditis elegans Hypothetical pr... 31 0.61
U41263-13|AAC24428.2| 1844|Caenorhabditis elegans Hypothetical p... 31 0.61
Z50071-1|CAA90408.1| 1022|Caenorhabditis elegans Hypothetical pr... 31 0.80
AF077538-1|AAC64622.1| 1275|Caenorhabditis elegans Hypothetical ... 31 0.80
U41994-9|AAK31523.1| 786|Caenorhabditis elegans Hypothetical pr... 31 1.1
U28941-5|AAM98026.2| 989|Caenorhabditis elegans Hypothetical pr... 31 1.1
AY314775-1|AAQ84882.1| 971|Caenorhabditis elegans methuselah-li... 31 1.1
Z70284-9|CAA94280.1| 290|Caenorhabditis elegans Hypothetical pr... 30 1.4
U80438-5|AAB37636.1| 1217|Caenorhabditis elegans Nuclear pore co... 30 1.9
Z83120-2|CAB05586.1| 883|Caenorhabditis elegans Hypothetical pr... 29 2.4
U64609-1|AAB04598.1| 405|Caenorhabditis elegans Sperm-specific ... 29 2.4
U41010-3|AAF98587.1| 655|Caenorhabditis elegans Hypothetical pr... 29 3.2
AL132846-3|CAB60346.2| 1648|Caenorhabditis elegans Hypothetical ... 29 3.2
AF101318-7|AAC69345.1| 826|Caenorhabditis elegans Hypothetical ... 29 3.2
U39649-3|AAM69070.1| 1538|Caenorhabditis elegans Hypothetical pr... 29 4.3
U39649-2|AAM69069.1| 1534|Caenorhabditis elegans Hypothetical pr... 29 4.3
Z81103-4|CAB03210.1| 686|Caenorhabditis elegans Hypothetical pr... 28 5.7
Z81048-1|CAB02839.1| 587|Caenorhabditis elegans Hypothetical pr... 28 5.7
Z72517-5|CAA96693.1| 545|Caenorhabditis elegans Hypothetical pr... 28 5.7
U80846-5|AAP82647.1| 825|Caenorhabditis elegans Hypothetical pr... 28 5.7
U80846-4|AAC70889.1| 1032|Caenorhabditis elegans Hypothetical pr... 28 5.7
AY652943-1|AAT73710.1| 686|Caenorhabditis elegans guanylate cyc... 28 5.7
AF106582-1|AAC78217.3| 1424|Caenorhabditis elegans Hypothetical ... 28 5.7
AB033380-1|BAA92264.1| 587|Caenorhabditis elegans kinesin like ... 28 5.7
Z75525-2|CAA99763.1| 1390|Caenorhabditis elegans Hypothetical pr... 28 7.5
Z47072-2|CAA87369.3| 1317|Caenorhabditis elegans Hypothetical pr... 28 7.5
AF077534-3|AAC26290.1| 389|Caenorhabditis elegans Hypothetical ... 27 9.9
AF067621-1|AAC17540.2| 4368|Caenorhabditis elegans Hypothetical ... 27 9.9
AF067617-5|AAC17559.1| 2957|Caenorhabditis elegans Temporarily a... 27 9.9
AC006669-1|AAF39909.1| 1203|Caenorhabditis elegans Hypothetical ... 27 9.9
>U97191-1|AAB52432.1| 805|Caenorhabditis elegans Nuclear pore
complex protein protein11 protein.
Length = 805
Score = 41.1 bits (92), Expect = 8e-04
Identities = 26/65 (40%), Positives = 39/65 (60%), Gaps = 1/65 (1%)
Frame = +1
Query: 4 SSTPSTQTSGLGFGVSSAPST-QATGLSFGVSSAPSTQATALSFGVSSATTQPPSTGINF 180
++ +T TSGL +SAPS+ ATG FG S+AP+ AT F + +A+ PS G+ F
Sbjct: 270 TAATTTATSGLFGAPTSAPSSAPATGGLFGASTAPAA-ATGGLFSIGAASASTPSVGL-F 327
Query: 181 GTGTS 195
G ++
Sbjct: 328 GNSSA 332
Score = 37.5 bits (83), Expect = 0.009
Identities = 28/66 (42%), Positives = 38/66 (57%), Gaps = 5/66 (7%)
Frame = +1
Query: 4 SSTPSTQTSGLGFG-VSSAPSTQA-TGLSFGVSSAPSTQA--TALSFGVSSATT-QPPST 168
++ P++ T+G FG ++AP+ TG FG S+ T A TA FG SS TT P+T
Sbjct: 360 AAAPTSSTTGGLFGSTAAAPAASLPTGGLFGSSTPAKTPAAPTAGLFGASSTTTTSAPAT 419
Query: 169 GINFGT 186
G FGT
Sbjct: 420 GSLFGT 425
Score = 35.5 bits (78), Expect = 0.037
Identities = 29/75 (38%), Positives = 38/75 (50%), Gaps = 11/75 (14%)
Frame = +1
Query: 4 SSTPSTQTSGLGFGVSSAPSTQA--TGLSFGVSSAPSTQATALS-------FGVSSATTQ 156
+ TP+ T+GL FG SS +T A TG FG + A +T +A FG SS TT
Sbjct: 395 AKTPAAPTAGL-FGASSTTTTSAPATGSLFGTAPATTTATSAAPAASTGGLFGASSTTTP 453
Query: 157 PPS--TGINFGTGTS 195
+ TG FG T+
Sbjct: 454 ASTAPTGGLFGAATT 468
Score = 34.7 bits (76), Expect = 0.065
Identities = 15/37 (40%), Positives = 24/37 (64%)
Frame = +3
Query: 381 FAQLEENINKWTLELEEQERTFINQATQINAWDTLLI 491
F L+E +N + E+ +QER F N+ ++NA+D LI
Sbjct: 606 FTALQEVVNSYHSEIAKQERVFHNKMLELNAYDRELI 642
Score = 31.9 bits (69), Expect = 0.46
Identities = 22/50 (44%), Positives = 31/50 (62%)
Frame = +1
Query: 4 SSTPSTQTSGLGFGVSSAPSTQATGLSFGVSSAPSTQATALSFGVSSATT 153
SS P+T GL FG S+AP+ ATG F + +A ++ + FG SSA+T
Sbjct: 289 SSAPAT--GGL-FGASTAPAA-ATGGLFSIGAASASTPSVGLFGNSSAST 334
Score = 31.1 bits (67), Expect = 0.80
Identities = 21/66 (31%), Positives = 35/66 (53%), Gaps = 2/66 (3%)
Frame = +1
Query: 4 SSTPSTQTSGLGFGVSSAPSTQATGLSFGVSSAPSTQATALSFGVSSATTQPPSTGIN-- 177
+++ + TSGL FG S+ +T ++G FG + P+ + L + ATT +T +
Sbjct: 222 ATSNAAPTSGL-FGNSAPAATASSGGLFGAAPKPAAPSGGLFGSTAPATTAATTTATSGL 280
Query: 178 FGTGTS 195
FG TS
Sbjct: 281 FGAPTS 286
Score = 27.9 bits (59), Expect = 7.5
Identities = 21/54 (38%), Positives = 30/54 (55%), Gaps = 5/54 (9%)
Frame = +1
Query: 49 SSAPSTQATGLSFGVSSAPSTQATALSFGV-SSATTQPPS----TGINFGTGTS 195
S+AP+ GL FG SS + +TA + G+ +ATT P+ TG FG T+
Sbjct: 434 SAAPAASTGGL-FGASSTTTPASTAPTGGLFGAATTTAPAAAAPTGGLFGAATT 486
Score = 27.5 bits (58), Expect = 9.9
Identities = 19/56 (33%), Positives = 27/56 (48%)
Frame = +1
Query: 16 STQTSGLGFGVSSAPSTQATGLSFGVSSAPSTQATALSFGVSSATTQPPSTGINFG 183
ST T + G S+A A+ FG S A + + S SSA + P+T + FG
Sbjct: 65 STATGSMFGGSSAAAPAPASAGIFGNSGAAAPAPASTSIFGSSANSAAPAT-VTFG 119
Score = 27.5 bits (58), Expect = 9.9
Identities = 19/60 (31%), Positives = 32/60 (53%)
Frame = +1
Query: 4 SSTPSTQTSGLGFGVSSAPSTQATGLSFGVSSAPSTQATALSFGVSSATTQPPSTGINFG 183
+++ ST + GL FG SSA +T A ++AP+ +T FG ++A P++ G
Sbjct: 316 AASASTPSVGL-FGNSSASTTAAAA----PATAPAAASTGGLFGATTAAAAAPTSSTTGG 370
>Z70284-12|CAB54278.1| 549|Caenorhabditis elegans Hypothetical
protein K07F5.13b protein.
Length = 549
Score = 34.7 bits (76), Expect = 0.065
Identities = 25/69 (36%), Positives = 37/69 (53%), Gaps = 6/69 (8%)
Frame = +1
Query: 4 SSTPSTQTSGLGFGVSSAPSTQATGLSFGVSSAPSTQATALSFGVSS------ATTQPPS 165
+ST +T T+G FG + ST AT FG S+ ST A S G ++ ++T P+
Sbjct: 71 TSTTTTSTAGTLFGAAPTTST-ATPSLFGASTTGSTPFGAASTGTAAGSTLFGSSTAKPA 129
Query: 166 TGINFGTGT 192
TG FG+ +
Sbjct: 130 TGGFFGSSS 138
>AL032643-6|CAA21657.1| 538|Caenorhabditis elegans Hypothetical
protein Y54E5A.4 protein.
Length = 538
Score = 32.7 bits (71), Expect = 0.26
Identities = 21/59 (35%), Positives = 36/59 (61%)
Frame = +1
Query: 10 TPSTQTSGLGFGVSSAPSTQATGLSFGVSSAPSTQATALSFGVSSATTQPPSTGINFGT 186
TP++ +S FG ++ ++ + GL FG +A +T A A + G+ A+T P+TG FG+
Sbjct: 67 TPASTSSVPLFGSTTTTASPSGGL-FGAKTA-TTAAPAPTGGLFGASTAAPATGSLFGS 123
Score = 31.9 bits (69), Expect = 0.46
Identities = 26/63 (41%), Positives = 39/63 (61%), Gaps = 3/63 (4%)
Frame = +1
Query: 16 STQTSGLGFGVS-SAPSTQATGLSFGVSSAPSTQATAL--SFGVSSATTQPPSTGINFGT 186
+ +SGL FG S +AP+ + GL FG ++AP+ +T+ FG S+ TT PS G+ FG
Sbjct: 38 AAMSSGL-FGASQTAPAPASAGL-FGSTTAPTPASTSSVPLFG-STTTTASPSGGL-FGA 93
Query: 187 GTS 195
T+
Sbjct: 94 KTA 96
>Z48582-8|CAB70201.1| 3178|Caenorhabditis elegans Hypothetical
protein ZK945.9 protein.
Length = 3178
Score = 31.9 bits (69), Expect = 0.46
Identities = 22/61 (36%), Positives = 34/61 (55%)
Frame = +1
Query: 4 SSTPSTQTSGLGFGVSSAPSTQATGLSFGVSSAPSTQATALSFGVSSATTQPPSTGINFG 183
++ PST T+ G SS+ ST ++ S VSS S+ ++ S SS TT+ +T + G
Sbjct: 493 TTAPSTSTT----GPSSSSSTPSSTASSSVSSTASSTQSSTSTQQSSTTTKSETTTSSDG 548
Query: 184 T 186
T
Sbjct: 549 T 549
Score = 27.5 bits (58), Expect = 9.9
Identities = 19/64 (29%), Positives = 30/64 (46%)
Frame = +1
Query: 4 SSTPSTQTSGLGFGVSSAPSTQATGLSFGVSSAPSTQATALSFGVSSATTQPPSTGINFG 183
SSTPST +S L + PS+ + S S+ +T + +TT +T I+
Sbjct: 674 SSTPSTPSSTLSTSTVTEPSSTRSSDSTTTSAGSTTTLQESTTTSEESTTDSSTTTISDT 733
Query: 184 TGTS 195
+ TS
Sbjct: 734 STTS 737
>Z48544-10|CAB70192.1| 3178|Caenorhabditis elegans Hypothetical
protein ZK945.9 protein.
Length = 3178
Score = 31.9 bits (69), Expect = 0.46
Identities = 22/61 (36%), Positives = 34/61 (55%)
Frame = +1
Query: 4 SSTPSTQTSGLGFGVSSAPSTQATGLSFGVSSAPSTQATALSFGVSSATTQPPSTGINFG 183
++ PST T+ G SS+ ST ++ S VSS S+ ++ S SS TT+ +T + G
Sbjct: 493 TTAPSTSTT----GPSSSSSTPSSTASSSVSSTASSTQSSTSTQQSSTTTKSETTTSSDG 548
Query: 184 T 186
T
Sbjct: 549 T 549
Score = 27.5 bits (58), Expect = 9.9
Identities = 19/64 (29%), Positives = 30/64 (46%)
Frame = +1
Query: 4 SSTPSTQTSGLGFGVSSAPSTQATGLSFGVSSAPSTQATALSFGVSSATTQPPSTGINFG 183
SSTPST +S L + PS+ + S S+ +T + +TT +T I+
Sbjct: 674 SSTPSTPSSTLSTSTVTEPSSTRSSDSTTTSAGSTTTLQESTTTSEESTTDSSTTTISDT 733
Query: 184 TGTS 195
+ TS
Sbjct: 734 STTS 737
>U80846-3|AAC70890.1| 2232|Caenorhabditis elegans Hypothetical protein
K06A9.1b protein.
Length = 2232
Score = 31.5 bits (68), Expect = 0.61
Identities = 26/60 (43%), Positives = 32/60 (53%), Gaps = 4/60 (6%)
Frame = +1
Query: 4 SSTPSTQTSGL----GFGVSSAPSTQATGLSFGVSSAPSTQATALSFGVSSATTQPPSTG 171
S T ST T G G SSA STQ + SSA ST A++ + G+ S +T P STG
Sbjct: 1545 SQTGSTVTMGSSSTSGVSTSSASSTQPQMSTSQGSSAGSTVASSTA-GLVSTSTVPSSTG 1603
Score = 31.5 bits (68), Expect = 0.61
Identities = 26/60 (43%), Positives = 32/60 (53%), Gaps = 4/60 (6%)
Frame = +1
Query: 4 SSTPSTQTSGL----GFGVSSAPSTQATGLSFGVSSAPSTQATALSFGVSSATTQPPSTG 171
S T ST T G G SSA STQ + SSA ST A++ + G+ S +T P STG
Sbjct: 1628 SQTGSTVTMGSSSTSGVSTSSASSTQPQMSTSQGSSAGSTVASSTT-GLVSTSTVPSSTG 1686
Score = 31.5 bits (68), Expect = 0.61
Identities = 26/60 (43%), Positives = 32/60 (53%), Gaps = 4/60 (6%)
Frame = +1
Query: 4 SSTPSTQTSGL----GFGVSSAPSTQATGLSFGVSSAPSTQATALSFGVSSATTQPPSTG 171
S T ST T G G SSA STQ + SSA ST A++ + G+ S +T P STG
Sbjct: 1867 SQTGSTVTMGSSSTSGVSTSSASSTQPQMSTSQGSSAGSTVASSTA-GLVSTSTVPSSTG 1925
Score = 29.5 bits (63), Expect = 2.4
Identities = 26/67 (38%), Positives = 33/67 (49%), Gaps = 4/67 (5%)
Frame = +1
Query: 4 SSTPSTQTSGL----GFGVSSAPSTQATGLSFGVSSAPSTQATALSFGVSSATTQPPSTG 171
S T ST T G G SSA STQ + SSA ST A++ + +S+T P STG
Sbjct: 1462 SQTGSTVTMGSSSTSGVSTSSASSTQPQMSTSQGSSAGSTVASSTASPAASSTA-PSSTG 1520
Query: 172 INFGTGT 192
T +
Sbjct: 1521 TMSSTSS 1527
Score = 28.3 bits (60), Expect = 5.7
Identities = 20/64 (31%), Positives = 33/64 (51%)
Frame = +1
Query: 4 SSTPSTQTSGLGFGVSSAPSTQATGLSFGVSSAPSTQATALSFGVSSATTQPPSTGINFG 183
SSTPS +S G +++ ST +T VSS+ +T ++ SS +T +G +
Sbjct: 397 SSTPSASSSSSGTMSTNSGSTGSTVTVAPVSSSTFGSSTPIASSSSSGSTVTVVSGSSST 456
Query: 184 TGTS 195
G+S
Sbjct: 457 YGSS 460
>U41263-13|AAC24428.2| 1844|Caenorhabditis elegans Hypothetical
protein T19D12.1 protein.
Length = 1844
Score = 31.5 bits (68), Expect = 0.61
Identities = 21/55 (38%), Positives = 26/55 (47%), Gaps = 1/55 (1%)
Frame = +1
Query: 7 STPST-QTSGLGFGVSSAPSTQATGLSFGVSSAPSTQATALSFGVSSATTQPPST 168
+ P+T TSG S STQ + V + ST A S VSS TT P +T
Sbjct: 794 TVPTTGTTSGAASTTGSITSTQQATSTSSVITTGSTSAPQSSTAVSSTTTSPSTT 848
Score = 29.9 bits (64), Expect = 1.9
Identities = 21/53 (39%), Positives = 28/53 (52%)
Frame = +1
Query: 1 VSSTPSTQTSGLGFGVSSAPSTQATGLSFGVSSAPSTQATALSFGVSSATTQP 159
VS+T T T+ G SSA ST +TG+S SS Q ++ S S + QP
Sbjct: 879 VSNTFGTSTTQ-GLTSSSAQSTASTGVSTVASSTTIPQGSSSSSPQSPTSAQP 930
Score = 27.5 bits (58), Expect = 9.9
Identities = 22/69 (31%), Positives = 34/69 (49%), Gaps = 4/69 (5%)
Frame = +1
Query: 1 VSSTPSTQTSGLGFGVSSAPSTQATGLSFGVSSAPSTQAT---ALSFGVSSATTQ-PPST 168
VSS+ T G V++ ++ +T S S PS+ A + + G + ATTQ ST
Sbjct: 1544 VSSSTVPNTGSTGSTVTNPSTSSSTSGSSSTQSIPSSTAANTGSSTSGPTVATTQGSSST 1603
Query: 169 GINFGTGTS 195
N TG++
Sbjct: 1604 QTNSNTGST 1612
>Z50071-1|CAA90408.1| 1022|Caenorhabditis elegans Hypothetical
protein T07D4.4a protein.
Length = 1022
Score = 31.1 bits (67), Expect = 0.80
Identities = 22/64 (34%), Positives = 32/64 (50%)
Frame = +1
Query: 4 SSTPSTQTSGLGFGVSSAPSTQATGLSFGVSSAPSTQATALSFGVSSATTQPPSTGINFG 183
SS S T+G FG S+ ++ + SFG+ S+ S SF SSA+ T +FG
Sbjct: 231 SSMKSPATTGGSFGSSTVVASIRSEESFGIKSSASAGG---SFNSSSASASQSRTVASFG 287
Query: 184 TGTS 195
+ S
Sbjct: 288 SKPS 291
>AF077538-1|AAC64622.1| 1275|Caenorhabditis elegans Hypothetical
protein H02F09.3 protein.
Length = 1275
Score = 31.1 bits (67), Expect = 0.80
Identities = 21/54 (38%), Positives = 31/54 (57%)
Frame = +1
Query: 7 STPSTQTSGLGFGVSSAPSTQATGLSFGVSSAPSTQATALSFGVSSATTQPPST 168
ST ST++S + G S ++ + G + SS ST +T S S++TQPPST
Sbjct: 1211 STGSTESSTMSAGTGSTETSTSGGSTVSGSSL-STSSTESS---GSSSTQPPST 1260
>U41994-9|AAK31523.1| 786|Caenorhabditis elegans Hypothetical
protein F59A6.3 protein.
Length = 786
Score = 30.7 bits (66), Expect = 1.1
Identities = 21/63 (33%), Positives = 34/63 (53%), Gaps = 7/63 (11%)
Frame = +1
Query: 1 VSSTPSTQT-SGLGFGVSSAPSTQA-----TGLSFGVSSAPSTQA-TALSFGVSSATTQP 159
VS+TP T SG+ +S P+T + +G + +S PST + + + G + +TT
Sbjct: 395 VSTTPGPSTISGISQSTTSGPTTTSEPSTTSGSTVSDTSGPSTTSGPSTTLGTTQSTTSG 454
Query: 160 PST 168
PST
Sbjct: 455 PST 457
Score = 28.3 bits (60), Expect = 5.7
Identities = 23/61 (37%), Positives = 32/61 (52%), Gaps = 6/61 (9%)
Frame = +1
Query: 4 SSTPSTQTSGLGFGVSSAPSTQA-----TGLSFGVSSAPSTQ-ATALSFGVSSATTQPPS 165
+S PST TSG +S PST + G + +S PST + +S S++TT PS
Sbjct: 418 TSEPST-TSGSTVSDTSGPSTTSGPSTTLGTTQSTTSGPSTTPGSTISTTSSASTTSGPS 476
Query: 166 T 168
T
Sbjct: 477 T 477
Score = 28.3 bits (60), Expect = 5.7
Identities = 18/55 (32%), Positives = 26/55 (47%)
Frame = +1
Query: 4 SSTPSTQTSGLGFGVSSAPSTQATGLSFGVSSAPSTQATALSFGVSSATTQPPST 168
+S PST SSA +T S G S+ +T + S G + +TT P+T
Sbjct: 452 TSGPSTTPGSTISTTSSASTTSGPSTSSG-STVSTTSGQSTSSGTTKSTTSGPTT 505
Score = 27.9 bits (59), Expect = 7.5
Identities = 20/55 (36%), Positives = 26/55 (47%)
Frame = +1
Query: 4 SSTPSTQTSGLGFGVSSAPSTQATGLSFGVSSAPSTQATALSFGVSSATTQPPST 168
+S PST T G +S PST SSA +T + S G + +TT ST
Sbjct: 438 TSGPST-TLGTTQSTTSGPSTTPGSTISTTSSASTTSGPSTSSGSTVSTTSGQST 491
Score = 27.5 bits (58), Expect = 9.9
Identities = 18/55 (32%), Positives = 27/55 (49%)
Frame = +1
Query: 4 SSTPSTQTSGLGFGVSSAPSTQATGLSFGVSSAPSTQATALSFGVSSATTQPPST 168
SS PST S +S PST + + S+ +T + + G + +TT PST
Sbjct: 506 SSGPST-VSERTLSTTSGPSTTSGPSTTSGSTVSTTPGASTTSGSTQSTTSGPST 559
Score = 27.5 bits (58), Expect = 9.9
Identities = 20/57 (35%), Positives = 30/57 (52%), Gaps = 1/57 (1%)
Frame = +1
Query: 1 VSSTP-STQTSGLGFGVSSAPSTQATGLSFGVSSAPSTQATALSFGVSSATTQPPST 168
VS+TP ++ TSG +S PST + + S+ +T + + G S TT PST
Sbjct: 537 VSTTPGASTTSGSTQSTTSGPSTSSGPSTASRSTVSTTSGPSTTSGPS--TTSGPST 591
>U28941-5|AAM98026.2| 989|Caenorhabditis elegans Hypothetical
protein F31D5.4 protein.
Length = 989
Score = 30.7 bits (66), Expect = 1.1
Identities = 23/69 (33%), Positives = 34/69 (49%), Gaps = 5/69 (7%)
Frame = +1
Query: 1 VSSTPSTQTSGLGFGVSS-APSTQATGLSFG----VSSAPSTQATALSFGVSSATTQPPS 165
+ +TP+T T V+S ST T + V++ P+T AT+ S +S TT PS
Sbjct: 244 IPTTPTTTTIASTSTVTSIVTSTTVTSTTVPTTTVVTTVPTTTATSTSTSTASTTTTTPS 303
Query: 166 TGINFGTGT 192
T + T T
Sbjct: 304 TSTHTTTVT 312
>AY314775-1|AAQ84882.1| 971|Caenorhabditis elegans methuselah-like
protein MTH-2 protein.
Length = 971
Score = 30.7 bits (66), Expect = 1.1
Identities = 23/69 (33%), Positives = 34/69 (49%), Gaps = 5/69 (7%)
Frame = +1
Query: 1 VSSTPSTQTSGLGFGVSS-APSTQATGLSFG----VSSAPSTQATALSFGVSSATTQPPS 165
+ +TP+T T V+S ST T + V++ P+T AT+ S +S TT PS
Sbjct: 226 IPTTPTTTTIASTSTVTSIVTSTTVTSTTVPTTTVVTTVPTTTATSTSTSTASTTTTTPS 285
Query: 166 TGINFGTGT 192
T + T T
Sbjct: 286 TSTHTTTVT 294
>Z70284-9|CAA94280.1| 290|Caenorhabditis elegans Hypothetical
protein K07F5.11 protein.
Length = 290
Score = 30.3 bits (65), Expect = 1.4
Identities = 17/50 (34%), Positives = 21/50 (42%)
Frame = +1
Query: 40 FGVSSAPSTQATGLSFGVSSAPSTQATALSFGVSSATTQPPSTGINFGTG 189
FGV+ +T A FGV P+ S V A PP T + G G
Sbjct: 6 FGVAGGSNTGAQSAYFGVGGGPAGGGGGAS-KVGGAGAPPPGTSVYMGAG 54
>U80438-5|AAB37636.1| 1217|Caenorhabditis elegans Nuclear pore
complex protein protein7 protein.
Length = 1217
Score = 29.9 bits (64), Expect = 1.9
Identities = 21/58 (36%), Positives = 27/58 (46%), Gaps = 3/58 (5%)
Frame = +1
Query: 4 SSTPSTQTSGLGFGVSSAP---STQATGLSFGVSSAPSTQATALSFGVSSATTQPPST 168
S+TPST G G G S+ ST + + FG S+ A FG T PP+T
Sbjct: 591 SNTPSTVKFGFGSGASTTTTIASTTSNTIPFGSGSS-----VAPLFGAPKTTAPPPTT 643
>Z83120-2|CAB05586.1| 883|Caenorhabditis elegans Hypothetical
protein R06A4.4a protein.
Length = 883
Score = 29.5 bits (63), Expect = 2.4
Identities = 22/64 (34%), Positives = 33/64 (51%), Gaps = 1/64 (1%)
Frame = +2
Query: 473 LGHITNSERREDVELNEAVETVK-NEQQSLEHELDFVLAQQKELEDLLGPMEKQLLQENN 649
L H +++R DV+ N V+ V+ NE Q L ++L+ KE+ D LL +NN
Sbjct: 17 LQHAHSTDR--DVQRNVQVQLVQLNEHQKFCCYLVYILSDMKEMIDATSRSLAGLLLKNN 74
Query: 650 DRIK 661
R K
Sbjct: 75 IRAK 78
>U64609-1|AAB04598.1| 405|Caenorhabditis elegans Sperm-specific
family, class qprotein 2 protein.
Length = 405
Score = 29.5 bits (63), Expect = 2.4
Identities = 16/50 (32%), Positives = 20/50 (40%)
Frame = +1
Query: 40 FGVSSAPSTQATGLSFGVSSAPSTQATALSFGVSSATTQPPSTGINFGTG 189
FGV+ +T A FGV P+ S V PP T + G G
Sbjct: 6 FGVAGGSNTGAQSAYFGVGGGPAGGGGGAS-KVGGGAAPPPGTSVYMGAG 54
>U41010-3|AAF98587.1| 655|Caenorhabditis elegans Hypothetical
protein T05A12.3 protein.
Length = 655
Score = 29.1 bits (62), Expect = 3.2
Identities = 14/63 (22%), Positives = 33/63 (52%)
Frame = +2
Query: 485 TNSERREDVELNEAVETVKNEQQSLEHELDFVLAQQKELEDLLGPMEKQLLQENNDRIKD 664
+ +E++ E++ E V NE+ + +L+ ++E++ EK+L ++ +R +D
Sbjct: 5 SRNEKKASREVDRIREEVSNEKSEAQRQLEAEKRARQEMQRKKLEKEKELAKKRKEREED 64
Query: 665 PER 673
R
Sbjct: 65 ERR 67
>AL132846-3|CAB60346.2| 1648|Caenorhabditis elegans Hypothetical
protein Y43D4A.5 protein.
Length = 1648
Score = 29.1 bits (62), Expect = 3.2
Identities = 18/52 (34%), Positives = 21/52 (40%)
Frame = +1
Query: 4 SSTPSTQTSGLGFGVSSAPSTQATGLSFGVSSAPSTQATALSFGVSSATTQP 159
SS P L FG +APS S S + +SFG ATT P
Sbjct: 662 SSQPGLSDGPLSFGSGNAPSEFGPVPSGSFGSPAGSNNGLVSFGSGPATTDP 713
>AF101318-7|AAC69345.1| 826|Caenorhabditis elegans Hypothetical
protein Y73C8C.3 protein.
Length = 826
Score = 29.1 bits (62), Expect = 3.2
Identities = 15/61 (24%), Positives = 27/61 (44%)
Frame = +2
Query: 479 HITNSERREDVELNEAVETVKNEQQSLEHELDFVLAQQKELEDLLGPMEKQLLQENNDRI 658
H+ S + E E + + + + +EH V Q+EL + + KQ+L N +
Sbjct: 583 HLRKSLKLSQQESEENSQKISEKNEEIEHLRAQVQTTQQELNETIRLQMKQILDHQNALV 642
Query: 659 K 661
K
Sbjct: 643 K 643
>U39649-3|AAM69070.1| 1538|Caenorhabditis elegans Hypothetical
protein T23F2.2b protein.
Length = 1538
Score = 28.7 bits (61), Expect = 4.3
Identities = 17/42 (40%), Positives = 24/42 (57%)
Frame = +2
Query: 485 TNSERREDVELNEAVETVKNEQQSLEHELDFVLAQQKELEDL 610
T S+ R + ++ V+T QQ EHE DF L+ Q+ L DL
Sbjct: 598 TMSDPRYMIMHSKEVQTTLTSQQLSEHESDF-LSTQQTLHDL 638
>U39649-2|AAM69069.1| 1534|Caenorhabditis elegans Hypothetical
protein T23F2.2a protein.
Length = 1534
Score = 28.7 bits (61), Expect = 4.3
Identities = 17/42 (40%), Positives = 24/42 (57%)
Frame = +2
Query: 485 TNSERREDVELNEAVETVKNEQQSLEHELDFVLAQQKELEDL 610
T S+ R + ++ V+T QQ EHE DF L+ Q+ L DL
Sbjct: 598 TMSDPRYMIMHSKEVQTTLTSQQLSEHESDF-LSTQQTLHDL 638
>Z81103-4|CAB03210.1| 686|Caenorhabditis elegans Hypothetical
protein M04G12.3 protein.
Length = 686
Score = 28.3 bits (60), Expect = 5.7
Identities = 19/55 (34%), Positives = 33/55 (60%), Gaps = 3/55 (5%)
Frame = +2
Query: 482 ITNSERREDVELNEAVETVKNEQQSLEHELDFVLAQQKE--LEDLL-GPMEKQLL 637
+ N +R DVE+N +E + +++ HEL+ V Q+ + L+D+L + KQLL
Sbjct: 389 LLNQQRLSDVEVNLQLEANNEQLETMTHELE-VERQKTDSILKDMLPRKIAKQLL 442
>Z81048-1|CAB02839.1| 587|Caenorhabditis elegans Hypothetical
protein C41G7.2 protein.
Length = 587
Score = 28.3 bits (60), Expect = 5.7
Identities = 18/69 (26%), Positives = 32/69 (46%)
Frame = +2
Query: 446 HQPSYPD*CLGHITNSERREDVELNEAVETVKNEQQSLEHELDFVLAQQKELEDLLGPME 625
HQ S G + ++R+ + L + + T+K +S E + +L DLL E
Sbjct: 174 HQKSKIQFLDGKLEGADRKL-ISLQDQLSTLKEVHKSKMEECEEYRVHNNDLRDLLNEKE 232
Query: 626 KQLLQENND 652
+L + +ND
Sbjct: 233 AELRKLHND 241
>Z72517-5|CAA96693.1| 545|Caenorhabditis elegans Hypothetical
protein T28F4.2 protein.
Length = 545
Score = 28.3 bits (60), Expect = 5.7
Identities = 17/60 (28%), Positives = 26/60 (43%), Gaps = 2/60 (3%)
Frame = +1
Query: 16 STQTSGLGFGVSSAPSTQATGLSFGVSSAPSTQATALSFGVSSATTQP--PSTGINFGTG 189
S G+ FG+ + T + S P+T+ GV+S + P S GI+ G G
Sbjct: 203 SVSREGIQFGLKLMLTVTQTKTNGNTDSLPTTKLAGARIGVNSRGSSPGLDSNGIDAGVG 262
>U80846-5|AAP82647.1| 825|Caenorhabditis elegans Hypothetical
protein K06A9.1c protein.
Length = 825
Score = 28.3 bits (60), Expect = 5.7
Identities = 20/64 (31%), Positives = 33/64 (51%)
Frame = +1
Query: 4 SSTPSTQTSGLGFGVSSAPSTQATGLSFGVSSAPSTQATALSFGVSSATTQPPSTGINFG 183
SSTPS +S G +++ ST +T VSS+ +T ++ SS +T +G +
Sbjct: 190 SSTPSASSSSSGTMSTNSGSTGSTVTVAPVSSSTFGSSTPIASSSSSGSTVTVVSGSSST 249
Query: 184 TGTS 195
G+S
Sbjct: 250 YGSS 253
>U80846-4|AAC70889.1| 1032|Caenorhabditis elegans Hypothetical
protein K06A9.1a protein.
Length = 1032
Score = 28.3 bits (60), Expect = 5.7
Identities = 20/64 (31%), Positives = 33/64 (51%)
Frame = +1
Query: 4 SSTPSTQTSGLGFGVSSAPSTQATGLSFGVSSAPSTQATALSFGVSSATTQPPSTGINFG 183
SSTPS +S G +++ ST +T VSS+ +T ++ SS +T +G +
Sbjct: 397 SSTPSASSSSSGTMSTNSGSTGSTVTVAPVSSSTFGSSTPIASSSSSGSTVTVVSGSSST 456
Query: 184 TGTS 195
G+S
Sbjct: 457 YGSS 460
>AY652943-1|AAT73710.1| 686|Caenorhabditis elegans guanylate
cyclase-like protein protein.
Length = 686
Score = 28.3 bits (60), Expect = 5.7
Identities = 19/55 (34%), Positives = 33/55 (60%), Gaps = 3/55 (5%)
Frame = +2
Query: 482 ITNSERREDVELNEAVETVKNEQQSLEHELDFVLAQQKE--LEDLL-GPMEKQLL 637
+ N +R DVE+N +E + +++ HEL+ V Q+ + L+D+L + KQLL
Sbjct: 389 LLNQQRLSDVEVNLQLEANNEQLETMTHELE-VERQKTDSILKDMLPRKIAKQLL 442
>AF106582-1|AAC78217.3| 1424|Caenorhabditis elegans Hypothetical
protein W05F2.7 protein.
Length = 1424
Score = 28.3 bits (60), Expect = 5.7
Identities = 16/40 (40%), Positives = 19/40 (47%), Gaps = 3/40 (7%)
Frame = +1
Query: 10 TPSTQTSGLGFGVSSA---PSTQATGLSFGVSSAPSTQAT 120
TP T+ +G S PSTQ TG + S P T AT
Sbjct: 628 TPMTEATGAFLSAGSTAMTPSTQGTGATGVTMSTPGTMAT 667
>AB033380-1|BAA92264.1| 587|Caenorhabditis elegans kinesin like
protein protein.
Length = 587
Score = 28.3 bits (60), Expect = 5.7
Identities = 18/69 (26%), Positives = 32/69 (46%)
Frame = +2
Query: 446 HQPSYPD*CLGHITNSERREDVELNEAVETVKNEQQSLEHELDFVLAQQKELEDLLGPME 625
HQ S G + ++R+ + L + + T+K +S E + +L DLL E
Sbjct: 174 HQKSKIQFLDGKLEGADRKL-ISLQDQLSTLKEVHKSKMEECEEYRVHNNDLRDLLNEKE 232
Query: 626 KQLLQENND 652
+L + +ND
Sbjct: 233 AELRKLHND 241
>Z75525-2|CAA99763.1| 1390|Caenorhabditis elegans Hypothetical protein
C03D6.4 protein.
Length = 1390
Score = 27.9 bits (59), Expect = 7.5
Identities = 22/71 (30%), Positives = 35/71 (49%), Gaps = 9/71 (12%)
Frame = +1
Query: 10 TPSTQTSGLGFGVSSAPSTQ-----ATGLSFGVSSAPSTQATALSF----GVSSATTQPP 162
TP++ TS + G S A S+ G +S P+T +++F G +SA+ +P
Sbjct: 1102 TPASNTSSIFGGGSKAASSPFGSFGQAGCQPAKTSNPATSTASVTFSFNTGATSASAKPA 1161
Query: 163 STGINFGTGTS 195
G +FG G S
Sbjct: 1162 GFG-SFGAGAS 1171
>Z47072-2|CAA87369.3| 1317|Caenorhabditis elegans Hypothetical
protein F26C11.3 protein.
Length = 1317
Score = 27.9 bits (59), Expect = 7.5
Identities = 20/64 (31%), Positives = 27/64 (42%), Gaps = 2/64 (3%)
Frame = +1
Query: 4 SSTPSTQTSGLGFGVSSAP--STQATGLSFGVSSAPSTQATALSFGVSSATTQPPSTGIN 177
S TP T T SS+ STQ++ ST S +S+T P+T N
Sbjct: 434 SETPETSTDFTATSTSSSSDSSTQSSNAQTSTIENGSTTTNFTSAPSTSSTPATPTTTYN 493
Query: 178 FGTG 189
+ TG
Sbjct: 494 WPTG 497
>AF077534-3|AAC26290.1| 389|Caenorhabditis elegans Hypothetical
protein K07D4.6 protein.
Length = 389
Score = 27.5 bits (58), Expect = 9.9
Identities = 13/22 (59%), Positives = 15/22 (68%)
Frame = +3
Query: 243 FRTITTTPSGITALGKTTASTS 308
FRT TTT S +TA+ TT TS
Sbjct: 242 FRTTTTTHSSLTAVPGTTEETS 263
>AF067621-1|AAC17540.2| 4368|Caenorhabditis elegans Hypothetical
protein F55F10.1 protein.
Length = 4368
Score = 27.5 bits (58), Expect = 9.9
Identities = 17/64 (26%), Positives = 30/64 (46%)
Frame = +2
Query: 485 TNSERREDVELNEAVETVKNEQQSLEHELDFVLAQQKELEDLLGPMEKQLLQENNDRIKD 664
+ +++ED L + KN+Q + D LA+++E ED EK + +D D
Sbjct: 3864 SEEQKKEDEALEQGTGGEKNDQDDNKDVADGGLAEEEEKEDQEDQDEKGEGKSKSDPNGD 3923
Query: 665 PERG 676
+G
Sbjct: 3924 GSKG 3927
>AF067617-5|AAC17559.1| 2957|Caenorhabditis elegans Temporarily
assigned gene nameprotein 192 protein.
Length = 2957
Score = 27.5 bits (58), Expect = 9.9
Identities = 16/43 (37%), Positives = 23/43 (53%)
Frame = +1
Query: 28 SGLGFGVSSAPSTQATGLSFGVSSAPSTQATALSFGVSSATTQ 156
SG G GVS+AP++ S SAP +QA + S ++Q
Sbjct: 564 SGYGIGVSTAPASMEPSQSVD-QSAPPSQAQIPATSTPSTSSQ 605
>AC006669-1|AAF39909.1| 1203|Caenorhabditis elegans Hypothetical
protein H43E16.1 protein.
Length = 1203
Score = 27.5 bits (58), Expect = 9.9
Identities = 20/54 (37%), Positives = 30/54 (55%)
Frame = +1
Query: 7 STPSTQTSGLGFGVSSAPSTQATGLSFGVSSAPSTQATALSFGVSSATTQPPST 168
S +TQ S V+S+ S+Q T S+ S +T ++ G SS TTQPP++
Sbjct: 675 SVQTTQVSSTTSPVASS-SSQMTSTQQPSGSSSSIGST-VNQGSSSVTTQPPAS 726
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,636,953
Number of Sequences: 27780
Number of extensions: 281382
Number of successful extensions: 1484
Number of sequences better than 10.0: 35
Number of HSP's better than 10.0 without gapping: 1209
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1471
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1634564590
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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