Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= br--1444
(699 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
CR457182-1|CAG33463.1| 186|Homo sapiens VPS29 protein. 163 4e-40
BC095446-1|AAH95446.1| 182|Homo sapiens vacuolar protein sortin... 163 4e-40
BC000880-1|AAH00880.1| 186|Homo sapiens vacuolar protein sortin... 163 4e-40
AF201946-1|AAF17238.1| 182|Homo sapiens DC7 protein protein. 163 4e-40
AF201936-1|AAF86872.1| 188|Homo sapiens DC15 protein. 163 4e-40
AF193795-1|AAF04596.1| 182|Homo sapiens vacuolar sorting protei... 163 4e-40
AF175264-1|AAF89952.1| 182|Homo sapiens vacuolar sorting protei... 163 4e-40
AF168716-1|AAF87318.1| 186|Homo sapiens x 007 protein protein. 163 4e-40
CR533468-1|CAG38499.1| 182|Homo sapiens VPS29 protein. 160 4e-39
BC015095-1|AAH15095.1| 87|Homo sapiens VPS29 protein protein. 97 4e-20
AF238374-1|AAF97749.1| 174|Homo sapiens mutant fibroblast growt... 30 6.9
>CR457182-1|CAG33463.1| 186|Homo sapiens VPS29 protein.
Length = 186
Score = 163 bits (397), Expect = 4e-40
Identities = 71/84 (84%), Positives = 78/84 (92%)
Frame = +2
Query: 257 NLCTKDSYDYLKTLASDVHVVRGDFDENATYPEQKVVTVGQFRIGLIHGHQVVPWGDEES 436
NLCTK+SYDYLKTLA DVH+VRGDFDEN YPEQKVVTVGQF+IGLIHGHQV+PWGD S
Sbjct: 43 NLCTKESYDYLKTLAGDVHIVRGDFDENLNYPEQKVVTVGQFKIGLIHGHQVIPWGDMAS 102
Query: 437 LALIQRQLDVDILISGHTHRFEAY 508
LAL+QRQ DVDILISGHTH+FEA+
Sbjct: 103 LALLQRQFDVDILISGHTHKFEAF 126
Score = 97.5 bits (232), Expect = 4e-20
Identities = 44/57 (77%), Positives = 51/57 (89%)
Frame = +1
Query: 508 QHENKFYINPGSATGGYSPLYRDPTPSFVLMDIQSSTVVTYVYKLLGDEVKVERIEY 678
+HENKFYINPGSATG Y+ L + PSFVLMDIQ+STVVTYVY+L+GD+VKVERIEY
Sbjct: 127 EHENKFYINPGSATGAYNALETNIIPSFVLMDIQASTVVTYVYQLIGDDVKVERIEY 183
Score = 77.0 bits (181), Expect = 6e-14
Identities = 33/36 (91%), Positives = 36/36 (100%)
Frame = +3
Query: 147 LVLVLGDLHIPHRCSSLPAKFKKLLLPGRIQHILCT 254
LVLVLGDLHIPHRC+SLPAKFKKLL+PG+IQHILCT
Sbjct: 6 LVLVLGDLHIPHRCNSLPAKFKKLLVPGKIQHILCT 41
>BC095446-1|AAH95446.1| 182|Homo sapiens vacuolar protein sorting
29 homolog (S. cerevisiae) protein.
Length = 182
Score = 163 bits (397), Expect = 4e-40
Identities = 71/84 (84%), Positives = 78/84 (92%)
Frame = +2
Query: 257 NLCTKDSYDYLKTLASDVHVVRGDFDENATYPEQKVVTVGQFRIGLIHGHQVVPWGDEES 436
NLCTK+SYDYLKTLA DVH+VRGDFDEN YPEQKVVTVGQF+IGLIHGHQV+PWGD S
Sbjct: 39 NLCTKESYDYLKTLAGDVHIVRGDFDENLNYPEQKVVTVGQFKIGLIHGHQVIPWGDMAS 98
Query: 437 LALIQRQLDVDILISGHTHRFEAY 508
LAL+QRQ DVDILISGHTH+FEA+
Sbjct: 99 LALLQRQFDVDILISGHTHKFEAF 122
Score = 97.5 bits (232), Expect = 4e-20
Identities = 44/57 (77%), Positives = 51/57 (89%)
Frame = +1
Query: 508 QHENKFYINPGSATGGYSPLYRDPTPSFVLMDIQSSTVVTYVYKLLGDEVKVERIEY 678
+HENKFYINPGSATG Y+ L + PSFVLMDIQ+STVVTYVY+L+GD+VKVERIEY
Sbjct: 123 EHENKFYINPGSATGAYNALETNIIPSFVLMDIQASTVVTYVYQLIGDDVKVERIEY 179
Score = 79.0 bits (186), Expect = 2e-14
Identities = 34/37 (91%), Positives = 37/37 (100%)
Frame = +3
Query: 144 MLVLVLGDLHIPHRCSSLPAKFKKLLLPGRIQHILCT 254
MLVLVLGDLHIPHRC+SLPAKFKKLL+PG+IQHILCT
Sbjct: 1 MLVLVLGDLHIPHRCNSLPAKFKKLLVPGKIQHILCT 37
>BC000880-1|AAH00880.1| 186|Homo sapiens vacuolar protein sorting
29 homolog (S. cerevisiae) protein.
Length = 186
Score = 163 bits (397), Expect = 4e-40
Identities = 71/84 (84%), Positives = 78/84 (92%)
Frame = +2
Query: 257 NLCTKDSYDYLKTLASDVHVVRGDFDENATYPEQKVVTVGQFRIGLIHGHQVVPWGDEES 436
NLCTK+SYDYLKTLA DVH+VRGDFDEN YPEQKVVTVGQF+IGLIHGHQV+PWGD S
Sbjct: 43 NLCTKESYDYLKTLAGDVHIVRGDFDENLNYPEQKVVTVGQFKIGLIHGHQVIPWGDMAS 102
Query: 437 LALIQRQLDVDILISGHTHRFEAY 508
LAL+QRQ DVDILISGHTH+FEA+
Sbjct: 103 LALLQRQFDVDILISGHTHKFEAF 126
Score = 97.5 bits (232), Expect = 4e-20
Identities = 44/57 (77%), Positives = 51/57 (89%)
Frame = +1
Query: 508 QHENKFYINPGSATGGYSPLYRDPTPSFVLMDIQSSTVVTYVYKLLGDEVKVERIEY 678
+HENKFYINPGSATG Y+ L + PSFVLMDIQ+STVVTYVY+L+GD+VKVERIEY
Sbjct: 127 EHENKFYINPGSATGAYNALETNIIPSFVLMDIQASTVVTYVYQLIGDDVKVERIEY 183
Score = 77.0 bits (181), Expect = 6e-14
Identities = 33/36 (91%), Positives = 36/36 (100%)
Frame = +3
Query: 147 LVLVLGDLHIPHRCSSLPAKFKKLLLPGRIQHILCT 254
LVLVLGDLHIPHRC+SLPAKFKKLL+PG+IQHILCT
Sbjct: 6 LVLVLGDLHIPHRCNSLPAKFKKLLVPGKIQHILCT 41
>AF201946-1|AAF17238.1| 182|Homo sapiens DC7 protein protein.
Length = 182
Score = 163 bits (397), Expect = 4e-40
Identities = 71/84 (84%), Positives = 78/84 (92%)
Frame = +2
Query: 257 NLCTKDSYDYLKTLASDVHVVRGDFDENATYPEQKVVTVGQFRIGLIHGHQVVPWGDEES 436
NLCTK+SYDYLKTLA DVH+VRGDFDEN YPEQKVVTVGQF+IGLIHGHQV+PWGD S
Sbjct: 39 NLCTKESYDYLKTLAGDVHIVRGDFDENLNYPEQKVVTVGQFKIGLIHGHQVIPWGDMAS 98
Query: 437 LALIQRQLDVDILISGHTHRFEAY 508
LAL+QRQ DVDILISGHTH+FEA+
Sbjct: 99 LALLQRQFDVDILISGHTHKFEAF 122
Score = 97.5 bits (232), Expect = 4e-20
Identities = 44/57 (77%), Positives = 51/57 (89%)
Frame = +1
Query: 508 QHENKFYINPGSATGGYSPLYRDPTPSFVLMDIQSSTVVTYVYKLLGDEVKVERIEY 678
+HENKFYINPGSATG Y+ L + PSFVLMDIQ+STVVTYVY+L+GD+VKVERIEY
Sbjct: 123 EHENKFYINPGSATGAYNALETNIIPSFVLMDIQASTVVTYVYQLIGDDVKVERIEY 179
Score = 79.0 bits (186), Expect = 2e-14
Identities = 34/37 (91%), Positives = 37/37 (100%)
Frame = +3
Query: 144 MLVLVLGDLHIPHRCSSLPAKFKKLLLPGRIQHILCT 254
MLVLVLGDLHIPHRC+SLPAKFKKLL+PG+IQHILCT
Sbjct: 1 MLVLVLGDLHIPHRCNSLPAKFKKLLVPGKIQHILCT 37
>AF201936-1|AAF86872.1| 188|Homo sapiens DC15 protein.
Length = 188
Score = 163 bits (397), Expect = 4e-40
Identities = 71/84 (84%), Positives = 78/84 (92%)
Frame = +2
Query: 257 NLCTKDSYDYLKTLASDVHVVRGDFDENATYPEQKVVTVGQFRIGLIHGHQVVPWGDEES 436
NLCTK+SYDYLKTLA DVH+VRGDFDEN YPEQKVVTVGQF+IGLIHGHQV+PWGD S
Sbjct: 45 NLCTKESYDYLKTLAGDVHIVRGDFDENLNYPEQKVVTVGQFKIGLIHGHQVIPWGDMAS 104
Query: 437 LALIQRQLDVDILISGHTHRFEAY 508
LAL+QRQ DVDILISGHTH+FEA+
Sbjct: 105 LALLQRQFDVDILISGHTHKFEAF 128
Score = 97.5 bits (232), Expect = 4e-20
Identities = 44/57 (77%), Positives = 51/57 (89%)
Frame = +1
Query: 508 QHENKFYINPGSATGGYSPLYRDPTPSFVLMDIQSSTVVTYVYKLLGDEVKVERIEY 678
+HENKFYINPGSATG Y+ L + PSFVLMDIQ+STVVTYVY+L+GD+VKVERIEY
Sbjct: 129 EHENKFYINPGSATGAYNALETNIIPSFVLMDIQASTVVTYVYQLIGDDVKVERIEY 185
Score = 75.8 bits (178), Expect = 1e-13
Identities = 32/36 (88%), Positives = 36/36 (100%)
Frame = +3
Query: 147 LVLVLGDLHIPHRCSSLPAKFKKLLLPGRIQHILCT 254
+VLVLGDLHIPHRC+SLPAKFKKLL+PG+IQHILCT
Sbjct: 8 VVLVLGDLHIPHRCNSLPAKFKKLLVPGKIQHILCT 43
>AF193795-1|AAF04596.1| 182|Homo sapiens vacuolar sorting protein
VPS29/PEP11 protein.
Length = 182
Score = 163 bits (397), Expect = 4e-40
Identities = 71/84 (84%), Positives = 78/84 (92%)
Frame = +2
Query: 257 NLCTKDSYDYLKTLASDVHVVRGDFDENATYPEQKVVTVGQFRIGLIHGHQVVPWGDEES 436
NLCTK+SYDYLKTLA DVH+VRGDFDEN YPEQKVVTVGQF+IGLIHGHQV+PWGD S
Sbjct: 39 NLCTKESYDYLKTLAGDVHIVRGDFDENLNYPEQKVVTVGQFKIGLIHGHQVIPWGDMAS 98
Query: 437 LALIQRQLDVDILISGHTHRFEAY 508
LAL+QRQ DVDILISGHTH+FEA+
Sbjct: 99 LALLQRQFDVDILISGHTHKFEAF 122
Score = 97.5 bits (232), Expect = 4e-20
Identities = 44/57 (77%), Positives = 51/57 (89%)
Frame = +1
Query: 508 QHENKFYINPGSATGGYSPLYRDPTPSFVLMDIQSSTVVTYVYKLLGDEVKVERIEY 678
+HENKFYINPGSATG Y+ L + PSFVLMDIQ+STVVTYVY+L+GD+VKVERIEY
Sbjct: 123 EHENKFYINPGSATGAYNALETNIIPSFVLMDIQASTVVTYVYQLIGDDVKVERIEY 179
Score = 79.0 bits (186), Expect = 2e-14
Identities = 34/37 (91%), Positives = 37/37 (100%)
Frame = +3
Query: 144 MLVLVLGDLHIPHRCSSLPAKFKKLLLPGRIQHILCT 254
MLVLVLGDLHIPHRC+SLPAKFKKLL+PG+IQHILCT
Sbjct: 1 MLVLVLGDLHIPHRCNSLPAKFKKLLVPGKIQHILCT 37
>AF175264-1|AAF89952.1| 182|Homo sapiens vacuolar sorting protein
29 protein.
Length = 182
Score = 163 bits (397), Expect = 4e-40
Identities = 71/84 (84%), Positives = 78/84 (92%)
Frame = +2
Query: 257 NLCTKDSYDYLKTLASDVHVVRGDFDENATYPEQKVVTVGQFRIGLIHGHQVVPWGDEES 436
NLCTK+SYDYLKTLA DVH+VRGDFDEN YPEQKVVTVGQF+IGLIHGHQV+PWGD S
Sbjct: 39 NLCTKESYDYLKTLAGDVHIVRGDFDENLNYPEQKVVTVGQFKIGLIHGHQVIPWGDMAS 98
Query: 437 LALIQRQLDVDILISGHTHRFEAY 508
LAL+QRQ DVDILISGHTH+FEA+
Sbjct: 99 LALLQRQFDVDILISGHTHKFEAF 122
Score = 97.5 bits (232), Expect = 4e-20
Identities = 44/57 (77%), Positives = 51/57 (89%)
Frame = +1
Query: 508 QHENKFYINPGSATGGYSPLYRDPTPSFVLMDIQSSTVVTYVYKLLGDEVKVERIEY 678
+HENKFYINPGSATG Y+ L + PSFVLMDIQ+STVVTYVY+L+GD+VKVERIEY
Sbjct: 123 EHENKFYINPGSATGAYNALETNIIPSFVLMDIQASTVVTYVYQLIGDDVKVERIEY 179
Score = 79.0 bits (186), Expect = 2e-14
Identities = 34/37 (91%), Positives = 37/37 (100%)
Frame = +3
Query: 144 MLVLVLGDLHIPHRCSSLPAKFKKLLLPGRIQHILCT 254
MLVLVLGDLHIPHRC+SLPAKFKKLL+PG+IQHILCT
Sbjct: 1 MLVLVLGDLHIPHRCNSLPAKFKKLLVPGKIQHILCT 37
>AF168716-1|AAF87318.1| 186|Homo sapiens x 007 protein protein.
Length = 186
Score = 163 bits (397), Expect = 4e-40
Identities = 71/84 (84%), Positives = 78/84 (92%)
Frame = +2
Query: 257 NLCTKDSYDYLKTLASDVHVVRGDFDENATYPEQKVVTVGQFRIGLIHGHQVVPWGDEES 436
NLCTK+SYDYLKTLA DVH+VRGDFDEN YPEQKVVTVGQF+IGLIHGHQV+PWGD S
Sbjct: 43 NLCTKESYDYLKTLAGDVHIVRGDFDENLNYPEQKVVTVGQFKIGLIHGHQVIPWGDMAS 102
Query: 437 LALIQRQLDVDILISGHTHRFEAY 508
LAL+QRQ DVDILISGHTH+FEA+
Sbjct: 103 LALLQRQFDVDILISGHTHKFEAF 126
Score = 97.5 bits (232), Expect = 4e-20
Identities = 44/57 (77%), Positives = 51/57 (89%)
Frame = +1
Query: 508 QHENKFYINPGSATGGYSPLYRDPTPSFVLMDIQSSTVVTYVYKLLGDEVKVERIEY 678
+HENKFYINPGSATG Y+ L + PSFVLMDIQ+STVVTYVY+L+GD+VKVERIEY
Sbjct: 127 EHENKFYINPGSATGAYNALETNIIPSFVLMDIQASTVVTYVYQLIGDDVKVERIEY 183
Score = 77.0 bits (181), Expect = 6e-14
Identities = 33/36 (91%), Positives = 36/36 (100%)
Frame = +3
Query: 147 LVLVLGDLHIPHRCSSLPAKFKKLLLPGRIQHILCT 254
LVLVLGDLHIPHRC+SLPAKFKKLL+PG+IQHILCT
Sbjct: 6 LVLVLGDLHIPHRCNSLPAKFKKLLVPGKIQHILCT 41
>CR533468-1|CAG38499.1| 182|Homo sapiens VPS29 protein.
Length = 182
Score = 160 bits (389), Expect = 4e-39
Identities = 70/84 (83%), Positives = 77/84 (91%)
Frame = +2
Query: 257 NLCTKDSYDYLKTLASDVHVVRGDFDENATYPEQKVVTVGQFRIGLIHGHQVVPWGDEES 436
NLCTK+SYDYLKTLA DVH+VRGDFDEN YPEQKVVTVGQF+IGLIHGHQV+PWGD S
Sbjct: 39 NLCTKESYDYLKTLAGDVHIVRGDFDENLNYPEQKVVTVGQFKIGLIHGHQVIPWGDMAS 98
Query: 437 LALIQRQLDVDILISGHTHRFEAY 508
LAL+QRQ DVDILISGHTH+ EA+
Sbjct: 99 LALLQRQFDVDILISGHTHKSEAF 122
Score = 97.9 bits (233), Expect = 3e-20
Identities = 50/79 (63%), Positives = 58/79 (73%)
Frame = +1
Query: 442 FDTEAAGCGHPDIRAHASL*GLQHENKFYINPGSATGGYSPLYRDPTPSFVLMDIQSSTV 621
FD + GH H S +HENKFYINPGSATG Y+ L + PSFVLMDIQ+STV
Sbjct: 106 FDVDILISGH----THKSE-AFEHENKFYINPGSATGAYNALETNIIPSFVLMDIQASTV 160
Query: 622 VTYVYKLLGDEVKVERIEY 678
VTYVY+L+GD+VKVERIEY
Sbjct: 161 VTYVYQLIGDDVKVERIEY 179
Score = 79.0 bits (186), Expect = 2e-14
Identities = 34/37 (91%), Positives = 37/37 (100%)
Frame = +3
Query: 144 MLVLVLGDLHIPHRCSSLPAKFKKLLLPGRIQHILCT 254
MLVLVLGDLHIPHRC+SLPAKFKKLL+PG+IQHILCT
Sbjct: 1 MLVLVLGDLHIPHRCNSLPAKFKKLLVPGKIQHILCT 37
>BC015095-1|AAH15095.1| 87|Homo sapiens VPS29 protein protein.
Length = 87
Score = 97.5 bits (232), Expect = 4e-20
Identities = 44/57 (77%), Positives = 51/57 (89%)
Frame = +1
Query: 508 QHENKFYINPGSATGGYSPLYRDPTPSFVLMDIQSSTVVTYVYKLLGDEVKVERIEY 678
+HENKFYINPGSATG Y+ L + PSFVLMDIQ+STVVTYVY+L+GD+VKVERIEY
Sbjct: 28 EHENKFYINPGSATGAYNALETNIIPSFVLMDIQASTVVTYVYQLIGDDVKVERIEY 84
Score = 49.2 bits (112), Expect = 1e-05
Identities = 21/25 (84%), Positives = 24/25 (96%)
Frame = +2
Query: 434 SLALIQRQLDVDILISGHTHRFEAY 508
SLAL+QRQ DVDILISGHTH+FEA+
Sbjct: 3 SLALLQRQFDVDILISGHTHKFEAF 27
>AF238374-1|AAF97749.1| 174|Homo sapiens mutant fibroblast growth
factor receptor 3 protein.
Length = 174
Score = 30.3 bits (65), Expect = 6.9
Identities = 12/31 (38%), Positives = 19/31 (61%)
Frame = -1
Query: 492 CVCPDIRMSTSSCLCIKARDSSSPQGTTWCP 400
CVC + + TS+C C++A +S +GT P
Sbjct: 79 CVCVCVCVCTSACACVRAHLASRCRGTLGVP 109
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 104,601,320
Number of Sequences: 237096
Number of extensions: 2462638
Number of successful extensions: 5111
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 4940
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5111
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 8063224416
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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