Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= br--1441
         (680 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    24   1.3  
EF592539-1|ABQ95985.1|  630|Tribolium castaneum beta-N-acetylglu...    23   2.3  
AM292381-1|CAL23193.2|  364|Tribolium castaneum gustatory recept...    22   4.0  
AM292361-1|CAL23173.2|  373|Tribolium castaneum gustatory recept...    21   9.3  

>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 23.8 bits (49), Expect = 1.3
 Identities = 12/33 (36%), Positives = 19/33 (57%), Gaps = 2/33 (6%)
 Frame = -2

Query: 667 FQVIIVTYTYIASRMFTV*LVF--CVSIVFCLY 575
           F ++ + Y Y A  +FTV L+F  C+   FC +
Sbjct: 141 FFLLCIYYFYCAFIIFTVHLLFLLCIYHFFCAF 173



 Score = 23.4 bits (48), Expect = 1.8
 Identities = 11/28 (39%), Positives = 15/28 (53%)
 Frame = -1

Query: 659 YYCNIHIYCITYVYSLVSILCVHCILFI 576
           YY  I + C+ Y Y    I  VH +LF+
Sbjct: 104 YYAFIILLCVYYFYYAFIIFTVH-LLFL 130



 Score = 22.6 bits (46), Expect = 3.1
 Identities = 11/30 (36%), Positives = 18/30 (60%)
 Frame = -2

Query: 673 SFFQVIIVTYTYIASRMFTV*LVFCVSIVF 584
           +F  ++ V Y Y A  +FTV L+F + I +
Sbjct: 106 AFIILLCVYYFYYAFIIFTVHLLFLLCIYY 135



 Score = 22.6 bits (46), Expect = 3.1
 Identities = 10/29 (34%), Positives = 15/29 (51%), Gaps = 1/29 (3%)
 Frame = -1

Query: 659 YYCNIHIY-CITYVYSLVSILCVHCILFI 576
           +YC + I  CI Y Y    +  VH +L +
Sbjct: 228 FYCVLIILLCIYYFYYAFILFTVHLLLLV 256



 Score = 21.8 bits (44), Expect = 5.3
 Identities = 8/32 (25%), Positives = 19/32 (59%)
 Frame = -2

Query: 679 TLSFFQVIIVTYTYIASRMFTV*LVFCVSIVF 584
           T+    ++ + + + A  +FT+ L+FC + +F
Sbjct: 157 TVHLLFLLCIYHFFCAFIIFTMHLLFCCAFIF 188



 Score = 21.4 bits (43), Expect = 7.1
 Identities = 10/29 (34%), Positives = 16/29 (55%)
 Frame = -2

Query: 661 VIIVTYTYIASRMFTV*LVFCVSIVFCLY 575
           ++ + Y Y A  +FTV L+  V I +  Y
Sbjct: 235 LLCIYYFYYAFILFTVHLLLLVCIYYFYY 263


>EF592539-1|ABQ95985.1|  630|Tribolium castaneum
           beta-N-acetylglucosaminidase FDL protein.
          Length = 630

 Score = 23.0 bits (47), Expect = 2.3
 Identities = 12/45 (26%), Positives = 24/45 (53%), Gaps = 2/45 (4%)
 Frame = +3

Query: 69  SIFIVFYFLNLFWTSTNNL-RPKLAKSV-QPFSNFSETNEQQFIY 197
           S   + +F+ L+W  T+NL   KL  +  QP+    +++  Q+ +
Sbjct: 14  SFCCILFFIYLYWQQTSNLTTSKLLYTYRQPYPRQKKSHPPQWTW 58


>AM292381-1|CAL23193.2|  364|Tribolium castaneum gustatory receptor
           candidate 60 protein.
          Length = 364

 Score = 22.2 bits (45), Expect = 4.0
 Identities = 8/26 (30%), Positives = 17/26 (65%)
 Frame = +1

Query: 181 NSNSFIYSFIYIDFRNSEPRRSKNET 258
           N++ FI+  I++ FR ++  +  N+T
Sbjct: 142 NASLFIFDLIFLSFRCTKLCKEANKT 167


>AM292361-1|CAL23173.2|  373|Tribolium castaneum gustatory receptor
           candidate 40 protein.
          Length = 373

 Score = 21.0 bits (42), Expect = 9.3
 Identities = 10/46 (21%), Positives = 22/46 (47%)
 Frame = +1

Query: 262 IFFNSGTKLVRT*NKNFRFKTD*NLLIAHDLYEILIHFISHKCFKL 399
           +F N  TK+     K+++  TD +  I +  + ++   +   CF +
Sbjct: 118 LFLNEWTKIEINLLKHYQSTTDLHKKIRYSAFGMIFVALLEHCFSM 163


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 143,458
Number of Sequences: 336
Number of extensions: 2715
Number of successful extensions: 9
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 17801955
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)