Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= br--1440
         (598 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U94747-1|AAC18913.1|  342|Homo sapiens HAN11 protein.                 169   6e-42
BC001264-1|AAH01264.1|  342|Homo sapiens WDR68 protein protein.       169   6e-42

>U94747-1|AAC18913.1|  342|Homo sapiens HAN11 protein.
          Length = 342

 Score =  169 bits (411), Expect = 6e-42
 Identities = 69/85 (81%), Positives = 81/85 (95%)
 Frame = +3

Query: 252 SPWPLYSMNWSVRPDKRFRLALGSFVEEYNNKVQIISLDEDTSEFTAKSTFDHPYPTTKI 431
           +PW +Y+MNWSVRPDKRFRLALGSFVEEYNNKVQ++ LDE++SEF  ++TFDHPYPTTK+
Sbjct: 15  APWTVYAMNWSVRPDKRFRLALGSFVEEYNNKVQLVGLDEESSEFICRNTFDHPYPTTKL 74

Query: 432 MWIPDSKGVYPDLLATSGDYLRIWR 506
           MWIPD+KGVYPDLLATSGDYLR+WR
Sbjct: 75  MWIPDTKGVYPDLLATSGDYLRVWR 99



 Score = 61.3 bits (142), Expect = 3e-09
 Identities = 25/30 (83%), Positives = 26/30 (86%)
 Frame = +2

Query: 509 GEPYTLFECVLNNNKNSDFCAPLTSFDWNE 598
           GE  T  EC+LNNNKNSDFCAPLTSFDWNE
Sbjct: 101 GETETRLECLLNNNKNSDFCAPLTSFDWNE 130


>BC001264-1|AAH01264.1|  342|Homo sapiens WDR68 protein protein.
          Length = 342

 Score =  169 bits (411), Expect = 6e-42
 Identities = 69/85 (81%), Positives = 81/85 (95%)
 Frame = +3

Query: 252 SPWPLYSMNWSVRPDKRFRLALGSFVEEYNNKVQIISLDEDTSEFTAKSTFDHPYPTTKI 431
           +PW +Y+MNWSVRPDKRFRLALGSFVEEYNNKVQ++ LDE++SEF  ++TFDHPYPTTK+
Sbjct: 15  APWTVYAMNWSVRPDKRFRLALGSFVEEYNNKVQLVGLDEESSEFICRNTFDHPYPTTKL 74

Query: 432 MWIPDSKGVYPDLLATSGDYLRIWR 506
           MWIPD+KGVYPDLLATSGDYLR+WR
Sbjct: 75  MWIPDTKGVYPDLLATSGDYLRVWR 99



 Score = 61.3 bits (142), Expect = 3e-09
 Identities = 25/30 (83%), Positives = 26/30 (86%)
 Frame = +2

Query: 509 GEPYTLFECVLNNNKNSDFCAPLTSFDWNE 598
           GE  T  EC+LNNNKNSDFCAPLTSFDWNE
Sbjct: 101 GETETRLECLLNNNKNSDFCAPLTSFDWNE 130


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 92,111,445
Number of Sequences: 237096
Number of extensions: 1994229
Number of successful extensions: 3582
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 3446
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3582
length of database: 76,859,062
effective HSP length: 86
effective length of database: 56,468,806
effective search space used: 6324506272
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)