Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= br--1436
         (653 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF222292-1|ABN79652.1|  354|Tribolium castaneum cardioactive pep...    22   5.1  
AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory recept...    21   8.9  
AM292322-1|CAL23134.1|  373|Tribolium castaneum gustatory recept...    21   8.9  

>EF222292-1|ABN79652.1|  354|Tribolium castaneum cardioactive
           peptide receptor 2 protein.
          Length = 354

 Score = 21.8 bits (44), Expect = 5.1
 Identities = 10/23 (43%), Positives = 15/23 (65%)
 Frame = -3

Query: 165 DLLRDRDFLPSVSTSISIYTLIK 97
           DLL+    +P   T+I+I TLI+
Sbjct: 306 DLLQVYGHIPKTQTNIAIATLIQ 328


>AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory receptor
            candidate 46 protein.
          Length = 1451

 Score = 21.0 bits (42), Expect = 8.9
 Identities = 9/39 (23%), Positives = 20/39 (51%)
 Frame = -1

Query: 251  ICCGTENEILIWIFFLSVWNHHETFLNPQIYYGIETSCH 135
            +C  T  E+   I+F  +   ++   + ++ + IET+ H
Sbjct: 1015 VCYATIQEVRAKIYFFYLVKFYKVSKSGELIHKIETNEH 1053


>AM292322-1|CAL23134.1|  373|Tribolium castaneum gustatory receptor
           candidate 1 protein.
          Length = 373

 Score = 21.0 bits (42), Expect = 8.9
 Identities = 9/39 (23%), Positives = 20/39 (51%)
 Frame = -1

Query: 251 ICCGTENEILIWIFFLSVWNHHETFLNPQIYYGIETSCH 135
           +C  T  E+   I+F  +   ++   + ++ + IET+ H
Sbjct: 296 VCYATIQEVRAKIYFFYLVKFYKVSKSGELIHKIETNEH 334


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 135,989
Number of Sequences: 336
Number of extensions: 2798
Number of successful extensions: 4
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 16865010
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)