Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= br--1436
         (653 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

M93690-2|AAA29363.1| 1212|Anopheles gambiae unknown protein.           27   0.68 
AY534995-1|AAT07393.1|  461|Anopheles gambiae XK-related protein.      24   3.7  
AJ439353-3|CAD27925.1| 1200|Anopheles gambiae putative TPR-conta...    24   3.7  
DQ182016-1|ABA56308.1|  353|Anopheles gambiae G(alpha)i protein.       23   8.4  
AY705394-1|AAU12503.1|  557|Anopheles gambiae nicotinic acetylch...    23   8.4  

>M93690-2|AAA29363.1| 1212|Anopheles gambiae unknown protein.
          Length = 1212

 Score = 26.6 bits (56), Expect = 0.68
 Identities = 13/54 (24%), Positives = 26/54 (48%)
 Frame = +2

Query: 368 GHRLNQDLVVDHLRNLDPEVVPMRKVVLGANRGPRLVLEAAR*SLAAITKRFEI 529
           G R+ QDLV+   R ++ +V+ +          PR  ++A++      T R+ +
Sbjct: 70  GGRIAQDLVLQTARQMEVDVLVLSHTYRPPENNPRWAVDASKKVAVVATGRYPL 123


>AY534995-1|AAT07393.1|  461|Anopheles gambiae XK-related protein.
          Length = 461

 Score = 24.2 bits (50), Expect = 3.7
 Identities = 12/31 (38%), Positives = 19/31 (61%)
 Frame = -2

Query: 640 LHQSLSWQGSLTCFCCLSCQLLGVTLRDVLW 548
           + QS+ W G LTCF  ++  L+G+ L  V +
Sbjct: 410 IRQSVLWTGLLTCF-PIATFLVGIGLMLVFY 439


>AJ439353-3|CAD27925.1| 1200|Anopheles gambiae putative TPR-containing
            phosphoprotein protein.
          Length = 1200

 Score = 24.2 bits (50), Expect = 3.7
 Identities = 20/47 (42%), Positives = 25/47 (53%)
 Frame = +3

Query: 441  KSYSERIAGRGSF*KRLVKVSQQSRSGSRSKFNSASQRTSRSVTPKS 581
            +S S   A RGS   R  +   +SRSGSRS+  S S   SR  +P S
Sbjct: 1149 RSRSGSQASRGS---RRSRSRSRSRSGSRSRSRSGS--GSRQASPIS 1190



 Score = 23.8 bits (49), Expect = 4.8
 Identities = 12/35 (34%), Positives = 20/35 (57%)
 Frame = +3

Query: 495  KVSQQSRSGSRSKFNSASQRTSRSVTPKS*QERQQ 599
            +   ++ SGSRS+  S S+  SRS + K  + R +
Sbjct: 1086 RAGSRAGSGSRSRSRSRSRSRSRSGSAKGSRSRSR 1120


>DQ182016-1|ABA56308.1|  353|Anopheles gambiae G(alpha)i protein.
          Length = 353

 Score = 23.0 bits (47), Expect = 8.4
 Identities = 14/43 (32%), Positives = 22/43 (51%)
 Frame = +3

Query: 57  QNLSKNITQSELYI*LKCISKWMSIQMAGSLDPVVDLWIQKCL 185
           +NL++   Q E+Y  L C +   +IQ     D V D+ I+  L
Sbjct: 307 ENLNRRKDQKEIYTHLTCATDTSNIQFV--FDAVSDVIIKNNL 347


>AY705394-1|AAU12503.1|  557|Anopheles gambiae nicotinic
           acetylcholine receptor subunitalpha 1 protein.
          Length = 557

 Score = 23.0 bits (47), Expect = 8.4
 Identities = 13/46 (28%), Positives = 26/46 (56%)
 Frame = -1

Query: 281 LLDLDLEGEVICCGTENEILIWIFFLSVWNHHETFLNPQIYYGIET 144
           L+D++L+ +++   T N   +W+     WN ++   NP  Y G++T
Sbjct: 60  LIDVNLKNQIM---TTN---VWVE--QEWNDYKLKWNPDDYGGVDT 97


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 605,988
Number of Sequences: 2352
Number of extensions: 11413
Number of successful extensions: 32
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 23
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 28
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 64814025
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)