Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= br--1435
         (653 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ850294-1|CAH64514.1|  539|Tribolium castaneum putative esteras...    22   5.1  
AJ850293-1|CAH64513.1|  539|Tribolium castaneum putative esteras...    22   5.1  
AJ850292-1|CAH64512.1|  539|Tribolium castaneum putative esteras...    22   5.1  
U14732-1|AAC46491.1|  322|Tribolium castaneum fushi-tarazu protein.    21   6.7  
AY043292-2|AAK96032.1|  290|Tribolium castaneum homeodomain tran...    21   6.7  
AJ850297-1|CAH64517.1|  539|Tribolium castaneum putative esteras...    21   8.9  
AJ850295-1|CAH64515.1|  539|Tribolium castaneum putative esteras...    21   8.9  
AF321227-1|AAK16421.1|  290|Tribolium castaneum Ftz protein.           21   8.9  

>AJ850294-1|CAH64514.1|  539|Tribolium castaneum putative esterase
           protein.
          Length = 539

 Score = 21.8 bits (44), Expect = 5.1
 Identities = 7/20 (35%), Positives = 12/20 (60%)
 Frame = -1

Query: 278 GSPLTRWLRQPLVPSHR*QV 219
           G  +  W  QP++P+H  Q+
Sbjct: 285 GPVIDSWATQPVLPTHPYQI 304


>AJ850293-1|CAH64513.1|  539|Tribolium castaneum putative esterase
           protein.
          Length = 539

 Score = 21.8 bits (44), Expect = 5.1
 Identities = 7/20 (35%), Positives = 12/20 (60%)
 Frame = -1

Query: 278 GSPLTRWLRQPLVPSHR*QV 219
           G  +  W  QP++P+H  Q+
Sbjct: 285 GPVIDSWATQPVLPTHPYQI 304


>AJ850292-1|CAH64512.1|  539|Tribolium castaneum putative esterase
           protein.
          Length = 539

 Score = 21.8 bits (44), Expect = 5.1
 Identities = 7/20 (35%), Positives = 12/20 (60%)
 Frame = -1

Query: 278 GSPLTRWLRQPLVPSHR*QV 219
           G  +  W  QP++P+H  Q+
Sbjct: 285 GPVIDSWATQPVLPTHPYQI 304


>U14732-1|AAC46491.1|  322|Tribolium castaneum fushi-tarazu protein.
          Length = 322

 Score = 21.4 bits (43), Expect = 6.7
 Identities = 9/21 (42%), Positives = 11/21 (52%)
 Frame = -3

Query: 618 SVCLKNHNILTLLPHNNDLNH 556
           S C KN N      HNN++ H
Sbjct: 27  SDCDKNQNTEQNYTHNNEMYH 47


>AY043292-2|AAK96032.1|  290|Tribolium castaneum homeodomain
           transcription factor Fushitarazu protein.
          Length = 290

 Score = 21.4 bits (43), Expect = 6.7
 Identities = 9/21 (42%), Positives = 11/21 (52%)
 Frame = -3

Query: 618 SVCLKNHNILTLLPHNNDLNH 556
           S C KN N      HNN++ H
Sbjct: 27  SDCDKNQNTEQNYTHNNEMYH 47


>AJ850297-1|CAH64517.1|  539|Tribolium castaneum putative esterase
           protein.
          Length = 539

 Score = 21.0 bits (42), Expect = 8.9
 Identities = 6/16 (37%), Positives = 10/16 (62%)
 Frame = -1

Query: 278 GSPLTRWLRQPLVPSH 231
           G  +  W  QP++P+H
Sbjct: 285 GPVIDSWATQPVLPTH 300


>AJ850295-1|CAH64515.1|  539|Tribolium castaneum putative esterase
           protein.
          Length = 539

 Score = 21.0 bits (42), Expect = 8.9
 Identities = 6/16 (37%), Positives = 10/16 (62%)
 Frame = -1

Query: 278 GSPLTRWLRQPLVPSH 231
           G  +  W  QP++P+H
Sbjct: 285 GPVIDSWATQPVLPTH 300


>AF321227-1|AAK16421.1|  290|Tribolium castaneum Ftz protein.
          Length = 290

 Score = 21.0 bits (42), Expect = 8.9
 Identities = 9/21 (42%), Positives = 11/21 (52%)
 Frame = -3

Query: 618 SVCLKNHNILTLLPHNNDLNH 556
           S C KN N      HNN++ H
Sbjct: 27  SDCDKNQNTEHNYTHNNEMYH 47


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 168,003
Number of Sequences: 336
Number of extensions: 4129
Number of successful extensions: 9
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 16865010
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)