Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= br--1435
(653 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
X58531-1|CAA41418.1| 2628|Homo sapiens laminin A chain protein. 37 0.072
AB076353-1|BAD01540.1| 365|Homo sapiens keratin associated prot... 35 0.29
BC062318-1|AAH62318.1| 559|Homo sapiens LAMA1 protein protein. 34 0.51
BC039051-1|AAH39051.1| 747|Homo sapiens LAMA1 protein protein. 34 0.51
Z99289-2|CAI42325.1| 1823|Homo sapiens laminin, alpha 4 protein. 33 0.67
X91171-1|CAA62596.1| 1816|Homo sapiens laminin alpha 4 protein. 33 0.67
X76939-1|CAA54258.1| 1581|Homo sapiens laminin A3 protein. 33 0.67
S78569-1|AAB34635.1| 1816|Homo sapiens laminin alpha 4 chain pro... 33 0.67
BC066552-1|AAH66552.1| 1816|Homo sapiens LAMA4 protein protein. 33 0.67
AL590106-3|CAI12950.1| 1823|Homo sapiens laminin, alpha 4 protein. 33 0.67
AB210027-1|BAE06109.1| 1852|Homo sapiens LAMA4 variant protein p... 33 0.67
AB076351-1|BAD01538.1| 401|Homo sapiens keratin associated prot... 33 1.2
BC146674-1|AAI46675.1| 788|Homo sapiens Unknown (protein for MG... 32 1.6
AK128761-1|BAC87604.1| 215|Homo sapiens protein ( Homo sapiens ... 32 1.6
BC133677-1|AAI33678.1| 194|Homo sapiens KRTAP10-3 protein protein. 31 2.7
AB076350-1|BAD01537.1| 221|Homo sapiens keratin associated prot... 31 2.7
BC125049-1|AAI25050.1| 401|Homo sapiens keratin associated prot... 31 3.6
BC125048-1|AAI25049.1| 401|Homo sapiens keratin associated prot... 31 3.6
BC119643-1|AAI19644.1| 370|Homo sapiens keratin associated prot... 31 3.6
AK096940-1|BAC04906.1| 226|Homo sapiens protein ( Homo sapiens ... 31 3.6
AB076354-1|BAD01541.1| 370|Homo sapiens keratin associated prot... 31 3.6
AK127601-1|BAC87052.1| 415|Homo sapiens protein ( Homo sapiens ... 31 4.7
BC062374-1|AAH62374.1| 455|Homo sapiens IBRDC3 protein protein. 30 6.3
AY210418-1|AAO34701.1| 3487|Homo sapiens CUB and sushi multiple ... 30 6.3
AK131439-1|BAD18585.1| 486|Homo sapiens protein ( Homo sapiens ... 30 6.3
AB212622-1|BAD97692.1| 3631|Homo sapiens CSMD2 protein protein. 30 6.3
AK122706-1|BAC85504.1| 814|Homo sapiens ISOFORM. protein. 25 7.7
BC113560-1|AAI13561.1| 548|Homo sapiens IBRDC3 protein protein. 30 8.3
AL031602-2|CAI19337.1| 541|Homo sapiens IBR domain containing 3... 30 8.3
AL031602-1|CAI19336.1| 396|Homo sapiens IBR domain containing 3... 30 8.3
AK074486-1|BAC11017.1| 541|Homo sapiens protein ( Homo sapiens ... 30 8.3
AB076364-1|BAD01551.1| 245|Homo sapiens keratin associated prot... 30 8.3
AB065580-1|BAC05810.1| 346|Homo sapiens seven transmembrane hel... 30 8.3
>X58531-1|CAA41418.1| 2628|Homo sapiens laminin A chain protein.
Length = 2628
Score = 36.7 bits (81), Expect = 0.072
Identities = 17/48 (35%), Positives = 27/48 (56%)
Frame = -3
Query: 189 SSQSGPQEYRFDGRGYATMAGRGYLTPQSNQVLLFFRTYAPNGLIYLL 46
SSQ+ + FDG GY+ + L Q+++ F T++PNGL+ L
Sbjct: 2300 SSQNEDPSFHFDGSGYSVVEKS--LPATVTQIIMLFNTFSPNGLLLYL 2345
>AB076353-1|BAD01540.1| 365|Homo sapiens keratin associated protein
protein.
Length = 365
Score = 34.7 bits (76), Expect = 0.29
Identities = 29/87 (33%), Positives = 39/87 (44%), Gaps = 6/87 (6%)
Frame = +3
Query: 246 RLSQPSCQWRPSPDPGQVRSCPRC-PSLHTGIRSECRSPC--SRPKKR*CEILEIVLK-- 410
R+S P C P P Q C PS +S C+ C S P ++ C + + K
Sbjct: 62 RVSSPCCPVTCEPSPCQSGCTSSCTPSCCQ--QSSCQLACCASSPCQQAC-CVPVCCKTV 118
Query: 411 CCECVTCVSVCFYDVRVL-RSECEFVC 488
CC+ V CVSVC D +S C+ C
Sbjct: 119 CCKPVCCVSVCCGDSSCCQQSSCQSAC 145
>BC062318-1|AAH62318.1| 559|Homo sapiens LAMA1 protein protein.
Length = 559
Score = 33.9 bits (74), Expect = 0.51
Identities = 15/45 (33%), Positives = 23/45 (51%)
Frame = -3
Query: 159 FDGRGYATMAGRGYLTPQSNQVLLFFRTYAPNGLIYLLKASVFEA 25
FDG GYA + GY + L FRT + NG++ + + +A
Sbjct: 379 FDGSGYAALVKEGYKVQSDVNITLEFRTSSQNGVLLGISTAKVDA 423
>BC039051-1|AAH39051.1| 747|Homo sapiens LAMA1 protein protein.
Length = 747
Score = 33.9 bits (74), Expect = 0.51
Identities = 15/45 (33%), Positives = 23/45 (51%)
Frame = -3
Query: 159 FDGRGYATMAGRGYLTPQSNQVLLFFRTYAPNGLIYLLKASVFEA 25
FDG GYA + GY + L FRT + NG++ + + +A
Sbjct: 567 FDGSGYAALVKEGYKVQSDVNITLEFRTSSQNGVLLGISTAKVDA 611
>Z99289-2|CAI42325.1| 1823|Homo sapiens laminin, alpha 4 protein.
Length = 1823
Score = 33.5 bits (73), Expect = 0.67
Identities = 23/55 (41%), Positives = 28/55 (50%), Gaps = 2/55 (3%)
Frame = -3
Query: 204 RDKLISSQSGPQEYRFDGRGYATMAG--RGYLTPQSNQVLLFFRTYAPNGLIYLL 46
RDKL +QS Y FDG GYA + R Q + + RT A NGLI L+
Sbjct: 1037 RDKLAFTQSRAASYFFDGSGYAVVRDITRRGKFGQVTRFDIEVRTPADNGLILLM 1091
>X91171-1|CAA62596.1| 1816|Homo sapiens laminin alpha 4 protein.
Length = 1816
Score = 33.5 bits (73), Expect = 0.67
Identities = 23/55 (41%), Positives = 28/55 (50%), Gaps = 2/55 (3%)
Frame = -3
Query: 204 RDKLISSQSGPQEYRFDGRGYATMAG--RGYLTPQSNQVLLFFRTYAPNGLIYLL 46
RDKL +QS Y FDG GYA + R Q + + RT A NGLI L+
Sbjct: 1030 RDKLAFTQSRAASYFFDGSGYAVVRDITRRGKFGQVTRFDIEVRTPADNGLILLM 1084
>X76939-1|CAA54258.1| 1581|Homo sapiens laminin A3 protein.
Length = 1581
Score = 33.5 bits (73), Expect = 0.67
Identities = 23/55 (41%), Positives = 28/55 (50%), Gaps = 2/55 (3%)
Frame = -3
Query: 204 RDKLISSQSGPQEYRFDGRGYATMAG--RGYLTPQSNQVLLFFRTYAPNGLIYLL 46
RDKL +QS Y FDG GYA + R Q + + RT A NGLI L+
Sbjct: 795 RDKLAFTQSRAASYFFDGSGYAVVRDITRRGKFGQVTRFDIEVRTPADNGLILLM 849
>S78569-1|AAB34635.1| 1816|Homo sapiens laminin alpha 4 chain protein.
Length = 1816
Score = 33.5 bits (73), Expect = 0.67
Identities = 23/55 (41%), Positives = 28/55 (50%), Gaps = 2/55 (3%)
Frame = -3
Query: 204 RDKLISSQSGPQEYRFDGRGYATMAG--RGYLTPQSNQVLLFFRTYAPNGLIYLL 46
RDKL +QS Y FDG GYA + R Q + + RT A NGLI L+
Sbjct: 1030 RDKLAFTQSRAASYFFDGSGYAVVRDIPRRGKFGQVTRFDIEVRTPADNGLILLM 1084
>BC066552-1|AAH66552.1| 1816|Homo sapiens LAMA4 protein protein.
Length = 1816
Score = 33.5 bits (73), Expect = 0.67
Identities = 23/55 (41%), Positives = 28/55 (50%), Gaps = 2/55 (3%)
Frame = -3
Query: 204 RDKLISSQSGPQEYRFDGRGYATMAG--RGYLTPQSNQVLLFFRTYAPNGLIYLL 46
RDKL +QS Y FDG GYA + R Q + + RT A NGLI L+
Sbjct: 1030 RDKLAFTQSRAASYFFDGSGYAVVRDITRRGKFGQVTRFDIEVRTPADNGLILLM 1084
>AL590106-3|CAI12950.1| 1823|Homo sapiens laminin, alpha 4 protein.
Length = 1823
Score = 33.5 bits (73), Expect = 0.67
Identities = 23/55 (41%), Positives = 28/55 (50%), Gaps = 2/55 (3%)
Frame = -3
Query: 204 RDKLISSQSGPQEYRFDGRGYATMAG--RGYLTPQSNQVLLFFRTYAPNGLIYLL 46
RDKL +QS Y FDG GYA + R Q + + RT A NGLI L+
Sbjct: 1037 RDKLAFTQSRAASYFFDGSGYAVVRDITRRGKFGQVTRFDIEVRTPADNGLILLM 1091
>AB210027-1|BAE06109.1| 1852|Homo sapiens LAMA4 variant protein
protein.
Length = 1852
Score = 33.5 bits (73), Expect = 0.67
Identities = 23/55 (41%), Positives = 28/55 (50%), Gaps = 2/55 (3%)
Frame = -3
Query: 204 RDKLISSQSGPQEYRFDGRGYATMAG--RGYLTPQSNQVLLFFRTYAPNGLIYLL 46
RDKL +QS Y FDG GYA + R Q + + RT A NGLI L+
Sbjct: 1066 RDKLAFTQSRAASYFFDGSGYAVVRDITRRGKFGQVTRFDIEVRTPADNGLILLM 1120
>AB076351-1|BAD01538.1| 401|Homo sapiens keratin associated protein
protein.
Length = 401
Score = 32.7 bits (71), Expect = 1.2
Identities = 28/87 (32%), Positives = 38/87 (43%), Gaps = 6/87 (6%)
Frame = +3
Query: 246 RLSQPSCQWRPSPDPGQVRSCPRC-PSLHTGIRSECRSPC--SRPKKR*CEILEIVLK-- 410
R+S P C P P Q C PS +S C+ C S P ++ C + + K
Sbjct: 62 RVSSPCCPVTCEPSPCQSGCTSSCTPSCCQ--QSSCQLACCASSPCQQAC-CVPVCCKTV 118
Query: 411 CCECVTCVSVCFYDVRVL-RSECEFVC 488
CC+ V CV VC D +S C+ C
Sbjct: 119 CCKPVCCVPVCCGDSSCCQQSSCQSAC 145
Score = 31.1 bits (67), Expect = 3.6
Identities = 27/86 (31%), Positives = 35/86 (40%), Gaps = 6/86 (6%)
Frame = +3
Query: 249 LSQPSCQ--WRPSP-DPGQVRSC-PRCPSLHTGIRSECRSPCSRPKKR*CEILEIVLKCC 416
+S P CQ PSP G + SC P C +S C+ C C+ V CC
Sbjct: 182 VSSPCCQAVCEPSPCQSGCISSCTPSCCQ-----QSSCQPACCTSSS--CQQACCVPVCC 234
Query: 417 ECVTCVSVCFYDVR--VLRSECEFVC 488
+ V C VC D +S C+ C
Sbjct: 235 KTVCCKPVCSEDSSSCCQQSSCQPAC 260
>BC146674-1|AAI46675.1| 788|Homo sapiens Unknown (protein for
MGC:164982) protein.
Length = 788
Score = 32.3 bits (70), Expect = 1.6
Identities = 16/59 (27%), Positives = 29/59 (49%)
Frame = -3
Query: 291 QDPARVSIDKMVATTAGTKSSLTGNSTEPRDKLISSQSGPQEYRFDGRGYATMAGRGYL 115
Q P++ + ++ + GT+ S+ G P+ ++ + S FDGR + GR YL
Sbjct: 719 QAPSKPAQALLLNSIQGTEGSIEGFLEAPKMEMSQAPSSVMSLHFDGRAQDSRTGRDYL 777
>AK128761-1|BAC87604.1| 215|Homo sapiens protein ( Homo sapiens
cDNA FLJ45064 fis, clone BRAWH3024242. ).
Length = 215
Score = 32.3 bits (70), Expect = 1.6
Identities = 20/47 (42%), Positives = 20/47 (42%), Gaps = 1/47 (2%)
Frame = +3
Query: 234 TWYQRLSQPSCQWRPSPDPGQVRSCPRCPSLHTGIRSECRS-PCSRP 371
TW Q L P P P P S P CP LH S CR P S P
Sbjct: 142 TWQQCLQTPGWPICP-PAPLSDLSLPGCPCLHPSSPSHCRCLPTSHP 187
>BC133677-1|AAI33678.1| 194|Homo sapiens KRTAP10-3 protein protein.
Length = 194
Score = 31.5 bits (68), Expect = 2.7
Identities = 26/81 (32%), Positives = 31/81 (38%), Gaps = 1/81 (1%)
Frame = +3
Query: 249 LSQPSCQWRPSPDPGQVRSCPRC-PSLHTGIRSECRSPCSRPKKR*CEILEIVLKCCECV 425
+S P CQ P P Q C PS +S C+ C C+ V CC+ V
Sbjct: 53 VSSPCCQAACEPSPCQSGCTSSCTPSCCQ--QSSCQPACCTSSP--CQQACCVPVCCKPV 108
Query: 426 TCVSVCFYDVRVLRSECEFVC 488
CV VC V C VC
Sbjct: 109 CCVPVCCKPVCCKPICCVPVC 129
>AB076350-1|BAD01537.1| 221|Homo sapiens keratin associated protein
protein.
Length = 221
Score = 31.5 bits (68), Expect = 2.7
Identities = 26/81 (32%), Positives = 31/81 (38%), Gaps = 1/81 (1%)
Frame = +3
Query: 249 LSQPSCQWRPSPDPGQVRSCPRC-PSLHTGIRSECRSPCSRPKKR*CEILEIVLKCCECV 425
+S P CQ P P Q C PS +S C+ C C+ V CC+ V
Sbjct: 53 VSSPCCQAACEPSPCQSGCTSSCTPSCCQ--QSSCQPACCTSSP--CQQACCVPVCCKPV 108
Query: 426 TCVSVCFYDVRVLRSECEFVC 488
CV VC V C VC
Sbjct: 109 CCVPVCCKPVCCKPICCVPVC 129
>BC125049-1|AAI25050.1| 401|Homo sapiens keratin associated protein
10-4 protein.
Length = 401
Score = 31.1 bits (67), Expect = 3.6
Identities = 27/86 (31%), Positives = 35/86 (40%), Gaps = 6/86 (6%)
Frame = +3
Query: 249 LSQPSCQ--WRPSP-DPGQVRSC-PRCPSLHTGIRSECRSPCSRPKKR*CEILEIVLKCC 416
+S P CQ PSP G + SC P C +S C+ C C+ V CC
Sbjct: 182 VSSPCCQAVCEPSPCQSGCISSCTPSCCQ-----QSSCQPACCTSSS--CQQACCVPVCC 234
Query: 417 ECVTCVSVCFYDVR--VLRSECEFVC 488
+ V C VC D +S C+ C
Sbjct: 235 KTVCCKPVCSEDSSSCCQQSSCQPAC 260
Score = 30.7 bits (66), Expect = 4.7
Identities = 27/86 (31%), Positives = 37/86 (43%), Gaps = 6/86 (6%)
Frame = +3
Query: 249 LSQPSCQWRPSPDPGQVRSCPRC-PSLHTGIRSECRSPC--SRPKKR*CEILEIVLK--C 413
+S P C P P Q C PS +S C+ C S P ++ C + + K C
Sbjct: 63 VSSPCCPVTCEPSPCQSGCTSSCTPSCCQ--QSSCQLACCASSPCQQAC-CVPVCCKTVC 119
Query: 414 CECVTCVSVCFYDVRVL-RSECEFVC 488
C+ V CV VC D +S C+ C
Sbjct: 120 CKPVCCVPVCCGDSSCCQQSSCQSAC 145
>BC125048-1|AAI25049.1| 401|Homo sapiens keratin associated protein
10-4 protein.
Length = 401
Score = 31.1 bits (67), Expect = 3.6
Identities = 27/86 (31%), Positives = 35/86 (40%), Gaps = 6/86 (6%)
Frame = +3
Query: 249 LSQPSCQ--WRPSP-DPGQVRSC-PRCPSLHTGIRSECRSPCSRPKKR*CEILEIVLKCC 416
+S P CQ PSP G + SC P C +S C+ C C+ V CC
Sbjct: 182 VSSPCCQAVCEPSPCQSGCISSCTPSCCQ-----QSSCQPACCTSSS--CQQACCVPVCC 234
Query: 417 ECVTCVSVCFYDVR--VLRSECEFVC 488
+ V C VC D +S C+ C
Sbjct: 235 KTVCCKPVCSEDSSSCCQQSSCQPAC 260
Score = 30.7 bits (66), Expect = 4.7
Identities = 27/86 (31%), Positives = 37/86 (43%), Gaps = 6/86 (6%)
Frame = +3
Query: 249 LSQPSCQWRPSPDPGQVRSCPRC-PSLHTGIRSECRSPC--SRPKKR*CEILEIVLK--C 413
+S P C P P Q C PS +S C+ C S P ++ C + + K C
Sbjct: 63 VSSPCCPVTCEPSPCQSGCTSSCTPSCCQ--QSSCQLACCASSPCQQAC-CVPVCCKTVC 119
Query: 414 CECVTCVSVCFYDVRVL-RSECEFVC 488
C+ V CV VC D +S C+ C
Sbjct: 120 CKPVCCVPVCCGDSSCCQQSSCQSAC 145
>BC119643-1|AAI19644.1| 370|Homo sapiens keratin associated protein
10-7 protein.
Length = 370
Score = 31.1 bits (67), Expect = 3.6
Identities = 27/86 (31%), Positives = 38/86 (44%), Gaps = 6/86 (6%)
Frame = +3
Query: 249 LSQPSCQWRPSPDPGQVRSCPRC-PSLHTGIRSECRSPC--SRPKKR*CEILEIVLK--C 413
+S P C+ P P Q C PS +S C+ C S P ++ C + + K C
Sbjct: 63 VSSPCCRVTCEPSPCQSGCTSSCTPSCCQ--QSSCQLACCASSPCQQAC-CVPVCCKTVC 119
Query: 414 CECVTCVSVCFYDVRVL-RSECEFVC 488
C+ V CV VC D +S C+ C
Sbjct: 120 CKPVYCVPVCSGDSSCCQQSSCQSAC 145
Score = 29.9 bits (64), Expect = 8.3
Identities = 24/72 (33%), Positives = 30/72 (41%), Gaps = 4/72 (5%)
Frame = +3
Query: 249 LSQPSCQ--WRPSP-DPGQVRSC-PRCPSLHTGIRSECRSPCSRPKKR*CEILEIVLKCC 416
+S P CQ PSP G + SC P C +S C+ C C+ V CC
Sbjct: 182 VSSPCCQAVCEPSPCQSGCISSCTPSCCQ-----QSSCKPACCTSSP--CQQACCVPVCC 234
Query: 417 ECVTCVSVCFYD 452
+ V CV C D
Sbjct: 235 KPVCCVPTCSDD 246
>AK096940-1|BAC04906.1| 226|Homo sapiens protein ( Homo sapiens
cDNA FLJ39621 fis, clone SMINT2001158. ).
Length = 226
Score = 31.1 bits (67), Expect = 3.6
Identities = 25/83 (30%), Positives = 35/83 (42%), Gaps = 9/83 (10%)
Frame = -3
Query: 624 PKSVCLKNHNILTLLPHNNDLNHITAYNKLITHS*VHALI*PALYNTQTHTHFVTRAH-- 451
P +V H L H++ H ++ HS H+ I NT THTH +T H
Sbjct: 66 PLTVTHITHTHLLTHIHSHSFTHAHMHSHTHIHSHTHSHIHS---NTPTHTHPLTSTHIQ 122
Query: 450 -------HKNTHSHM*RTHNTST 403
H +TH+H +TST
Sbjct: 123 TSTVTHTHSHTHAHKHTYTHTST 145
>AB076354-1|BAD01541.1| 370|Homo sapiens keratin associated protein
protein.
Length = 370
Score = 31.1 bits (67), Expect = 3.6
Identities = 27/86 (31%), Positives = 38/86 (44%), Gaps = 6/86 (6%)
Frame = +3
Query: 249 LSQPSCQWRPSPDPGQVRSCPRC-PSLHTGIRSECRSPC--SRPKKR*CEILEIVLK--C 413
+S P C+ P P Q C PS +S C+ C S P ++ C + + K C
Sbjct: 63 VSSPCCRVTCEPSPCQSGCTSSCTPSCCQ--QSSCQLACCASSPCQQAC-CVPVCCKTVC 119
Query: 414 CECVTCVSVCFYDVRVL-RSECEFVC 488
C+ V CV VC D +S C+ C
Sbjct: 120 CKPVYCVPVCSGDSSCCQQSSCQSAC 145
Score = 29.9 bits (64), Expect = 8.3
Identities = 24/72 (33%), Positives = 30/72 (41%), Gaps = 4/72 (5%)
Frame = +3
Query: 249 LSQPSCQ--WRPSP-DPGQVRSC-PRCPSLHTGIRSECRSPCSRPKKR*CEILEIVLKCC 416
+S P CQ PSP G + SC P C +S C+ C C+ V CC
Sbjct: 182 VSSPCCQAVCEPSPCQSGCISSCTPSCCQ-----QSSCKPACCTSSP--CQQACCVPVCC 234
Query: 417 ECVTCVSVCFYD 452
+ V CV C D
Sbjct: 235 KPVCCVPTCSDD 246
>AK127601-1|BAC87052.1| 415|Homo sapiens protein ( Homo sapiens
cDNA FLJ45698 fis, clone FEBRA2017811. ).
Length = 415
Score = 30.7 bits (66), Expect = 4.7
Identities = 25/79 (31%), Positives = 37/79 (46%), Gaps = 6/79 (7%)
Frame = -3
Query: 600 HNILTLLPHNN--DLNHITAYNKLITHS*VHALI*PALYNTQTHTHFVTRAH---HKNTH 436
H + PH + H+ ++ + TH+ HA I ++ T THTH T AH H NT+
Sbjct: 266 HTHMDTYPHTHIHTCTHMHSHAHINTHT--HAHIHMHMH-THTHTHTYTHAHAHIHINTY 322
Query: 435 SHM*R-THNTSTQFLIFHT 382
H TH + + HT
Sbjct: 323 MHTYTYTHIRTYTHIQMHT 341
>BC062374-1|AAH62374.1| 455|Homo sapiens IBRDC3 protein protein.
Length = 455
Score = 30.3 bits (65), Expect = 6.3
Identities = 18/55 (32%), Positives = 24/55 (43%), Gaps = 3/55 (5%)
Frame = +3
Query: 201 PWVLWSYLSTMTWYQRLSQPSCQWRPSPDPGQ---VRSCPRCPSLHTGIRSECRS 356
P ++ Y M S P C+W P+PD G C CP L T R C++
Sbjct: 50 PPLMHKYEEFMLRRYLASDPDCRWCPAPDCGYAVIAYGCASCPKL-TCEREGCQT 103
>AY210418-1|AAO34701.1| 3487|Homo sapiens CUB and sushi multiple
domains 2 protein.
Length = 3487
Score = 30.3 bits (65), Expect = 6.3
Identities = 21/74 (28%), Positives = 32/74 (43%)
Frame = -3
Query: 243 GTKSSLTGNSTEPRDKLISSQSGPQEYRFDGRGYATMAGRGYLTPQSNQVLLFFRTYAPN 64
G + +L+ TEP I+ GPQ+ + + + SNQVLL F A
Sbjct: 2219 GVRLNLSLLQTEPSGDFITIWDGPQQTAPRLGVFTRSMAKKTVQSSSNQVLLKFHRDAAT 2278
Query: 63 GLIYLLKASVFEAT 22
G I+ + S + T
Sbjct: 2279 GGIFAIAFSAYPLT 2292
>AK131439-1|BAD18585.1| 486|Homo sapiens protein ( Homo sapiens
cDNA FLJ16569 fis, clone TESOP2001796, moderately
similar to RING finger protein 19. ).
Length = 486
Score = 30.3 bits (65), Expect = 6.3
Identities = 18/55 (32%), Positives = 24/55 (43%), Gaps = 3/55 (5%)
Frame = +3
Query: 201 PWVLWSYLSTMTWYQRLSQPSCQWRPSPDPGQ---VRSCPRCPSLHTGIRSECRS 356
P ++ Y M S P C+W P+PD G C CP L T R C++
Sbjct: 81 PPLMHKYEEFMLRRYLASDPDCRWCPAPDCGYAVIAYGCASCPKL-TCEREGCQT 134
>AB212622-1|BAD97692.1| 3631|Homo sapiens CSMD2 protein protein.
Length = 3631
Score = 30.3 bits (65), Expect = 6.3
Identities = 21/74 (28%), Positives = 32/74 (43%)
Frame = -3
Query: 243 GTKSSLTGNSTEPRDKLISSQSGPQEYRFDGRGYATMAGRGYLTPQSNQVLLFFRTYAPN 64
G + +L+ TEP I+ GPQ+ + + + SNQVLL F A
Sbjct: 2217 GVRLNLSLLQTEPSGDFITIWDGPQQTAPRLGVFTRSMAKKTVQSSSNQVLLKFHRDAAT 2276
Query: 63 GLIYLLKASVFEAT 22
G I+ + S + T
Sbjct: 2277 GGIFAIAFSAYPLT 2290
>AK122706-1|BAC85504.1| 814|Homo sapiens ISOFORM. protein.
Length = 814
Score = 25.0 bits (52), Expect(2) = 7.7
Identities = 11/21 (52%), Positives = 12/21 (57%)
Frame = +3
Query: 258 PSCQWRPSPDPGQVRSCPRCP 320
P+ RP PGQ CPRCP
Sbjct: 522 PTTCARPQSGPGQC--CPRCP 540
Score = 23.4 bits (48), Expect(2) = 7.7
Identities = 10/24 (41%), Positives = 12/24 (50%)
Frame = +3
Query: 294 QVRSCPRCPSLHTGIRSECRSPCS 365
Q R CPR P H + C + CS
Sbjct: 575 QPRPCPRAPCAHPLPGTCCPNDCS 598
>BC113560-1|AAI13561.1| 548|Homo sapiens IBRDC3 protein protein.
Length = 548
Score = 29.9 bits (64), Expect = 8.3
Identities = 15/38 (39%), Positives = 19/38 (50%), Gaps = 3/38 (7%)
Frame = +3
Query: 252 SQPSCQWRPSPDPGQ---VRSCPRCPSLHTGIRSECRS 356
S P C+W P+PD G C CP L T R C++
Sbjct: 15 SDPDCRWCPAPDCGYAVIAYGCASCPKL-TCEREGCQT 51
>AL031602-2|CAI19337.1| 541|Homo sapiens IBR domain containing 3
protein.
Length = 541
Score = 29.9 bits (64), Expect = 8.3
Identities = 15/38 (39%), Positives = 19/38 (50%), Gaps = 3/38 (7%)
Frame = +3
Query: 252 SQPSCQWRPSPDPGQ---VRSCPRCPSLHTGIRSECRS 356
S P C+W P+PD G C CP L T R C++
Sbjct: 8 SDPDCRWCPAPDCGYAVIAYGCASCPKL-TCEREGCQT 44
>AL031602-1|CAI19336.1| 396|Homo sapiens IBR domain containing 3
protein.
Length = 396
Score = 29.9 bits (64), Expect = 8.3
Identities = 15/38 (39%), Positives = 19/38 (50%), Gaps = 3/38 (7%)
Frame = +3
Query: 252 SQPSCQWRPSPDPGQ---VRSCPRCPSLHTGIRSECRS 356
S P C+W P+PD G C CP L T R C++
Sbjct: 8 SDPDCRWCPAPDCGYAVIAYGCASCPKL-TCEREGCQT 44
>AK074486-1|BAC11017.1| 541|Homo sapiens protein ( Homo sapiens
cDNA FLJ90005 fis, clone HEMBA1000084, moderately
similar to GAMETOGENESIS EXPRESSED PROTEIN GEG-154. ).
Length = 541
Score = 29.9 bits (64), Expect = 8.3
Identities = 15/38 (39%), Positives = 19/38 (50%), Gaps = 3/38 (7%)
Frame = +3
Query: 252 SQPSCQWRPSPDPGQ---VRSCPRCPSLHTGIRSECRS 356
S P C+W P+PD G C CP L T R C++
Sbjct: 8 SDPDCRWCPAPDCGYAVIAYGCASCPKL-TCEREGCQT 44
>AB076364-1|BAD01551.1| 245|Homo sapiens keratin associated protein
protein.
Length = 245
Score = 29.9 bits (64), Expect = 8.3
Identities = 21/67 (31%), Positives = 27/67 (40%), Gaps = 1/67 (1%)
Frame = +3
Query: 246 RLSQPSCQWRPSPDPGQVRSCPRC-PSLHTGIRSECRSPCSRPKKR*CEILEIVLKCCEC 422
R+S P C+ P P Q C PS +S C+ C C+ V CC+
Sbjct: 57 RVSSPCCRVTCEPSPCQSGCTSSCTPSCCQ--QSSCQPACCTSSP--CQQACCVPVCCKT 112
Query: 423 VTCVSVC 443
V C VC
Sbjct: 113 VCCKPVC 119
>AB065580-1|BAC05810.1| 346|Homo sapiens seven transmembrane helix
receptor protein.
Length = 346
Score = 29.9 bits (64), Expect = 8.3
Identities = 17/46 (36%), Positives = 27/46 (58%), Gaps = 6/46 (13%)
Frame = +1
Query: 400 LC*SVVSALHV*VCVFM---MCACYEVSVSLCV---I*CRLY*CVY 519
LC V ++V VC+++ +C C VSVS+C+ + +Y CVY
Sbjct: 75 LCVCVSVCVYVSVCMYLCVFLCVCVYVSVSVCLCVYLHISVYLCVY 120
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 103,794,897
Number of Sequences: 237096
Number of extensions: 2619628
Number of successful extensions: 10078
Number of sequences better than 10.0: 33
Number of HSP's better than 10.0 without gapping: 9454
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10044
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 7310122300
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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