Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= br--1434
         (678 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ787088-1|ABG79574.1|  266|Homo sapiens angiotonin transactivat...    37   0.076
BC014204-1|AAH14204.1|  268|Homo sapiens transmembrane protein 1...    37   0.076
BC000623-1|AAH00623.1|  268|Homo sapiens transmembrane protein 1...    37   0.076
AK000218-1|BAA91017.1|  250|Homo sapiens protein ( Homo sapiens ...    37   0.076

>DQ787088-1|ABG79574.1|  266|Homo sapiens angiotonin transactivated
           protein 1 protein.
          Length = 266

 Score = 36.7 bits (81), Expect = 0.076
 Identities = 18/55 (32%), Positives = 32/55 (58%)
 Frame = +1

Query: 346 DGSFIVNCVISYCIKRNSPLLIVSSHNSITHYHNVGLRMNHNLFKSCEAGVIDYL 510
           DGSF+V+  +S+ +K N  +  V+   S +HY  VG ++  +L  + E G + +L
Sbjct: 30  DGSFLVHHFLSFYLKANCKVCFVALIQSFSHYSIVGQKLGVSLTMARERGQLVFL 84


>BC014204-1|AAH14204.1|  268|Homo sapiens transmembrane protein 103
           protein.
          Length = 268

 Score = 36.7 bits (81), Expect = 0.076
 Identities = 18/55 (32%), Positives = 32/55 (58%)
 Frame = +1

Query: 346 DGSFIVNCVISYCIKRNSPLLIVSSHNSITHYHNVGLRMNHNLFKSCEAGVIDYL 510
           DGSF+V+  +S+ +K N  +  V+   S +HY  VG ++  +L  + E G + +L
Sbjct: 30  DGSFLVHHFLSFYLKANCKVCFVALIQSFSHYSIVGQKLGVSLTMARERGQLVFL 84


>BC000623-1|AAH00623.1|  268|Homo sapiens transmembrane protein 103
           protein.
          Length = 268

 Score = 36.7 bits (81), Expect = 0.076
 Identities = 18/55 (32%), Positives = 32/55 (58%)
 Frame = +1

Query: 346 DGSFIVNCVISYCIKRNSPLLIVSSHNSITHYHNVGLRMNHNLFKSCEAGVIDYL 510
           DGSF+V+  +S+ +K N  +  V+   S +HY  VG ++  +L  + E G + +L
Sbjct: 30  DGSFLVHHFLSFYLKANCKVCFVALIQSFSHYSIVGQKLGVSLTMARERGQLVFL 84


>AK000218-1|BAA91017.1|  250|Homo sapiens protein ( Homo sapiens
           cDNA FLJ20211 fis, clone COLF1807. ).
          Length = 250

 Score = 36.7 bits (81), Expect = 0.076
 Identities = 18/55 (32%), Positives = 32/55 (58%)
 Frame = +1

Query: 346 DGSFIVNCVISYCIKRNSPLLIVSSHNSITHYHNVGLRMNHNLFKSCEAGVIDYL 510
           DGSF+V+  +S+ +K N  +  V+   S +HY  VG ++  +L  + E G + +L
Sbjct: 30  DGSFLVHHFLSFYLKANCKVCFVALIQSFSHYSIVGQKLGVSLTMARERGQLVFL 84


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 87,884,038
Number of Sequences: 237096
Number of extensions: 1627157
Number of successful extensions: 2259
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 2232
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2259
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 7671262118
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)