Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= br--1433X
(583 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
D38542-1|BAA07545.1| 256|Caenorhabditis elegans CeTMIII protein. 87 9e-18
D38539-3|BAA07542.1| 256|Caenorhabditis elegans CeTMIII protein. 87 9e-18
AL132877-5|CAD45604.1| 256|Caenorhabditis elegans Hypothetical ... 87 9e-18
AL132877-3|CAC70115.1| 256|Caenorhabditis elegans Hypothetical ... 87 9e-18
AF298180-1|AAG10302.1| 256|Caenorhabditis elegans tropomyosin i... 87 9e-18
D38541-1|BAA07544.1| 284|Caenorhabditis elegans CeTMII protein. 86 2e-17
D38540-1|BAA07543.1| 284|Caenorhabditis elegans CeTMI protein. 86 2e-17
D38539-2|BAA07541.1| 284|Caenorhabditis elegans CeTMII protein. 86 2e-17
D38539-1|BAA07540.1| 284|Caenorhabditis elegans CeTMI protein. 86 2e-17
AL132877-4|CAC70112.1| 284|Caenorhabditis elegans Hypothetical ... 86 2e-17
AL132877-2|CAC70113.2| 193|Caenorhabditis elegans Hypothetical ... 86 2e-17
AL132877-1|CAC70114.1| 284|Caenorhabditis elegans Hypothetical ... 86 2e-17
Z72502-7|CAA96592.1| 140|Caenorhabditis elegans Hypothetical pr... 32 0.26
Z82080-4|CAC70117.1| 1125|Caenorhabditis elegans Hypothetical pr... 29 2.4
AF016687-1|AAC48094.2| 315|Caenorhabditis elegans Dumpy : short... 29 3.2
U41538-4|AAG00011.1| 175|Caenorhabditis elegans Hypothetical pr... 27 7.4
AL110501-1|CAB54509.1| 2129|Caenorhabditis elegans Hypothetical ... 27 7.4
AC006620-1|AAF39780.1| 754|Caenorhabditis elegans Hypothetical ... 27 7.4
Z46791-5|CAA86755.2| 948|Caenorhabditis elegans Hypothetical pr... 27 9.7
AF024502-6|AAB70378.4| 402|Caenorhabditis elegans Hypothetical ... 27 9.7
>D38542-1|BAA07545.1| 256|Caenorhabditis elegans CeTMIII protein.
Length = 256
Score = 87.0 bits (206), Expect = 9e-18
Identities = 45/71 (63%), Positives = 53/71 (74%)
Frame = +2
Query: 257 EEVARKLAMVEADLXXXXXXXXXXXXKIVELEEELRVVGNNLKSLEVSEEKATKREETYX 436
EEVARKLAMVEADL KIVELEEELRVVGNNLKSLEVSEEKA +RE++Y
Sbjct: 135 EEVARKLAMVEADLERAEERAEAGENKIVELEEELRVVGNNLKSLEVSEEKALQREDSYE 194
Query: 437 THLKLLDAQLK 469
++ + ++LK
Sbjct: 195 EQIRTVSSRLK 205
Score = 35.1 bits (77), Expect = 0.037
Identities = 15/24 (62%), Positives = 21/24 (87%)
Frame = +1
Query: 508 EKLQKEVDRLEDDLVAEREKSKLL 579
+KLQKEVDRLED+L+ E+E+ + L
Sbjct: 219 QKLQKEVDRLEDELLLEKERVRNL 242
Score = 27.9 bits (59), Expect = 5.6
Identities = 16/33 (48%), Positives = 18/33 (54%)
Frame = +3
Query: 12 AESEVAALNRRIQXXXXXXXXXXXXXATATAKL 110
AE+EVAALNRRI TAT+KL
Sbjct: 53 AEAEVAALNRRIVLVEEDLERTEDRLKTATSKL 85
>D38539-3|BAA07542.1| 256|Caenorhabditis elegans CeTMIII protein.
Length = 256
Score = 87.0 bits (206), Expect = 9e-18
Identities = 45/71 (63%), Positives = 53/71 (74%)
Frame = +2
Query: 257 EEVARKLAMVEADLXXXXXXXXXXXXKIVELEEELRVVGNNLKSLEVSEEKATKREETYX 436
EEVARKLAMVEADL KIVELEEELRVVGNNLKSLEVSEEKA +RE++Y
Sbjct: 135 EEVARKLAMVEADLERAEERAEAGENKIVELEEELRVVGNNLKSLEVSEEKALQREDSYE 194
Query: 437 THLKLLDAQLK 469
++ + ++LK
Sbjct: 195 EQIRTVSSRLK 205
Score = 35.1 bits (77), Expect = 0.037
Identities = 15/24 (62%), Positives = 21/24 (87%)
Frame = +1
Query: 508 EKLQKEVDRLEDDLVAEREKSKLL 579
+KLQKEVDRLED+L+ E+E+ + L
Sbjct: 219 QKLQKEVDRLEDELLLEKERVRNL 242
Score = 27.9 bits (59), Expect = 5.6
Identities = 16/33 (48%), Positives = 18/33 (54%)
Frame = +3
Query: 12 AESEVAALNRRIQXXXXXXXXXXXXXATATAKL 110
AE+EVAALNRRI TAT+KL
Sbjct: 53 AEAEVAALNRRIVLVEEDLERTEDRLKTATSKL 85
>AL132877-5|CAD45604.1| 256|Caenorhabditis elegans Hypothetical
protein Y105E8B.1e protein.
Length = 256
Score = 87.0 bits (206), Expect = 9e-18
Identities = 45/71 (63%), Positives = 53/71 (74%)
Frame = +2
Query: 257 EEVARKLAMVEADLXXXXXXXXXXXXKIVELEEELRVVGNNLKSLEVSEEKATKREETYX 436
EEVARKLAMVEADL KIVELEEELRVVGNNLKSLEVSEEKA +RE++Y
Sbjct: 135 EEVARKLAMVEADLERAEERAEAGENKIVELEEELRVVGNNLKSLEVSEEKALQREDSYE 194
Query: 437 THLKLLDAQLK 469
++ + ++LK
Sbjct: 195 EQIRTVSSRLK 205
Score = 35.1 bits (77), Expect = 0.037
Identities = 15/24 (62%), Positives = 21/24 (87%)
Frame = +1
Query: 508 EKLQKEVDRLEDDLVAEREKSKLL 579
+KLQKEVDRLED+L+ E+E+ + L
Sbjct: 219 QKLQKEVDRLEDELLLEKERVRNL 242
Score = 27.9 bits (59), Expect = 5.6
Identities = 16/33 (48%), Positives = 18/33 (54%)
Frame = +3
Query: 12 AESEVAALNRRIQXXXXXXXXXXXXXATATAKL 110
AE+EVAALNRRI TAT+KL
Sbjct: 53 AEAEVAALNRRIVLVEEDLERTEDRLKTATSKL 85
>AL132877-3|CAC70115.1| 256|Caenorhabditis elegans Hypothetical
protein Y105E8B.1c protein.
Length = 256
Score = 87.0 bits (206), Expect = 9e-18
Identities = 45/71 (63%), Positives = 53/71 (74%)
Frame = +2
Query: 257 EEVARKLAMVEADLXXXXXXXXXXXXKIVELEEELRVVGNNLKSLEVSEEKATKREETYX 436
EEVARKLAMVEADL KIVELEEELRVVGNNLKSLEVSEEKA +RE++Y
Sbjct: 135 EEVARKLAMVEADLERAEERAEAGENKIVELEEELRVVGNNLKSLEVSEEKALQREDSYE 194
Query: 437 THLKLLDAQLK 469
++ + ++LK
Sbjct: 195 EQIRTVSSRLK 205
Score = 28.7 bits (61), Expect = 3.2
Identities = 15/25 (60%), Positives = 19/25 (76%)
Frame = +1
Query: 508 EKLQKEVDRLEDDLVAEREKSKLLQ 582
+KLQKEVDRLE+ AE K++ LQ
Sbjct: 219 QKLQKEVDRLEELRDAEVLKARQLQ 243
Score = 27.9 bits (59), Expect = 5.6
Identities = 16/33 (48%), Positives = 18/33 (54%)
Frame = +3
Query: 12 AESEVAALNRRIQXXXXXXXXXXXXXATATAKL 110
AE+EVAALNRRI TAT+KL
Sbjct: 53 AEAEVAALNRRIVLVEEDLERTEDRLKTATSKL 85
>AF298180-1|AAG10302.1| 256|Caenorhabditis elegans tropomyosin
isoform IV protein.
Length = 256
Score = 87.0 bits (206), Expect = 9e-18
Identities = 45/71 (63%), Positives = 53/71 (74%)
Frame = +2
Query: 257 EEVARKLAMVEADLXXXXXXXXXXXXKIVELEEELRVVGNNLKSLEVSEEKATKREETYX 436
EEVARKLAMVEADL KIVELEEELRVVGNNLKSLEVSEEKA +RE++Y
Sbjct: 135 EEVARKLAMVEADLERAEERAEAGENKIVELEEELRVVGNNLKSLEVSEEKALQREDSYE 194
Query: 437 THLKLLDAQLK 469
++ + ++LK
Sbjct: 195 EQIRTVSSRLK 205
Score = 28.7 bits (61), Expect = 3.2
Identities = 15/25 (60%), Positives = 19/25 (76%)
Frame = +1
Query: 508 EKLQKEVDRLEDDLVAEREKSKLLQ 582
+KLQKEVDRLE+ AE K++ LQ
Sbjct: 219 QKLQKEVDRLEELRDAEVLKARQLQ 243
Score = 27.9 bits (59), Expect = 5.6
Identities = 16/33 (48%), Positives = 18/33 (54%)
Frame = +3
Query: 12 AESEVAALNRRIQXXXXXXXXXXXXXATATAKL 110
AE+EVAALNRRI TAT+KL
Sbjct: 53 AEAEVAALNRRIVLVEEDLERTEDRLKTATSKL 85
>D38541-1|BAA07544.1| 284|Caenorhabditis elegans CeTMII protein.
Length = 284
Score = 85.8 bits (203), Expect = 2e-17
Identities = 44/71 (61%), Positives = 53/71 (74%)
Frame = +2
Query: 257 EEVARKLAMVEADLXXXXXXXXXXXXKIVELEEELRVVGNNLKSLEVSEEKATKREETYX 436
+EVARKLAMVEADL KIVELEEELRVVGNNLKSLEVSEEKA +RE++Y
Sbjct: 163 DEVARKLAMVEADLERAEERAEAGENKIVELEEELRVVGNNLKSLEVSEEKALQREDSYE 222
Query: 437 THLKLLDAQLK 469
++ + ++LK
Sbjct: 223 EQIRTVSSRLK 233
Score = 28.7 bits (61), Expect = 3.2
Identities = 15/25 (60%), Positives = 19/25 (76%)
Frame = +1
Query: 508 EKLQKEVDRLEDDLVAEREKSKLLQ 582
+KLQKEVDRLE+ AE K++ LQ
Sbjct: 247 QKLQKEVDRLEELRDAEVLKARQLQ 271
Score = 27.1 bits (57), Expect = 9.7
Identities = 12/34 (35%), Positives = 19/34 (55%)
Frame = +1
Query: 154 KALENRTNMEDDRVAILEAQLSQANSSPRSRTRK 255
K +ENR+ +++R +EAQL +A RK
Sbjct: 128 KVMENRSLQDEERANTVEAQLKEAQLLAEEADRK 161
>D38540-1|BAA07543.1| 284|Caenorhabditis elegans CeTMI protein.
Length = 284
Score = 85.8 bits (203), Expect = 2e-17
Identities = 44/71 (61%), Positives = 53/71 (74%)
Frame = +2
Query: 257 EEVARKLAMVEADLXXXXXXXXXXXXKIVELEEELRVVGNNLKSLEVSEEKATKREETYX 436
+EVARKLAMVEADL KIVELEEELRVVGNNLKSLEVSEEKA +RE++Y
Sbjct: 163 DEVARKLAMVEADLERAEERAEAGENKIVELEEELRVVGNNLKSLEVSEEKALQREDSYE 222
Query: 437 THLKLLDAQLK 469
++ + ++LK
Sbjct: 223 EQIRTVSSRLK 233
Score = 37.1 bits (82), Expect = 0.009
Identities = 16/24 (66%), Positives = 21/24 (87%)
Frame = +1
Query: 508 EKLQKEVDRLEDDLVAEREKSKLL 579
+KLQKEVDRLED+LV E+E+ K +
Sbjct: 247 QKLQKEVDRLEDELVHEKERYKTI 270
Score = 27.1 bits (57), Expect = 9.7
Identities = 12/34 (35%), Positives = 19/34 (55%)
Frame = +1
Query: 154 KALENRTNMEDDRVAILEAQLSQANSSPRSRTRK 255
K +ENR+ +++R +EAQL +A RK
Sbjct: 128 KVMENRSLQDEERANTVEAQLKEAQLLAEEADRK 161
>D38539-2|BAA07541.1| 284|Caenorhabditis elegans CeTMII protein.
Length = 284
Score = 85.8 bits (203), Expect = 2e-17
Identities = 44/71 (61%), Positives = 53/71 (74%)
Frame = +2
Query: 257 EEVARKLAMVEADLXXXXXXXXXXXXKIVELEEELRVVGNNLKSLEVSEEKATKREETYX 436
+EVARKLAMVEADL KIVELEEELRVVGNNLKSLEVSEEKA +RE++Y
Sbjct: 163 DEVARKLAMVEADLERAEERAEAGENKIVELEEELRVVGNNLKSLEVSEEKALQREDSYE 222
Query: 437 THLKLLDAQLK 469
++ + ++LK
Sbjct: 223 EQIRTVSSRLK 233
Score = 28.7 bits (61), Expect = 3.2
Identities = 15/25 (60%), Positives = 19/25 (76%)
Frame = +1
Query: 508 EKLQKEVDRLEDDLVAEREKSKLLQ 582
+KLQKEVDRLE+ AE K++ LQ
Sbjct: 247 QKLQKEVDRLEELRDAEVLKARQLQ 271
Score = 27.1 bits (57), Expect = 9.7
Identities = 12/34 (35%), Positives = 19/34 (55%)
Frame = +1
Query: 154 KALENRTNMEDDRVAILEAQLSQANSSPRSRTRK 255
K +ENR+ +++R +EAQL +A RK
Sbjct: 128 KVMENRSLQDEERANTVEAQLKEAQLLAEEADRK 161
>D38539-1|BAA07540.1| 284|Caenorhabditis elegans CeTMI protein.
Length = 284
Score = 85.8 bits (203), Expect = 2e-17
Identities = 44/71 (61%), Positives = 53/71 (74%)
Frame = +2
Query: 257 EEVARKLAMVEADLXXXXXXXXXXXXKIVELEEELRVVGNNLKSLEVSEEKATKREETYX 436
+EVARKLAMVEADL KIVELEEELRVVGNNLKSLEVSEEKA +RE++Y
Sbjct: 163 DEVARKLAMVEADLERAEERAEAGENKIVELEEELRVVGNNLKSLEVSEEKALQREDSYE 222
Query: 437 THLKLLDAQLK 469
++ + ++LK
Sbjct: 223 EQIRTVSSRLK 233
Score = 37.1 bits (82), Expect = 0.009
Identities = 16/24 (66%), Positives = 21/24 (87%)
Frame = +1
Query: 508 EKLQKEVDRLEDDLVAEREKSKLL 579
+KLQKEVDRLED+LV E+E+ K +
Sbjct: 247 QKLQKEVDRLEDELVHEKERYKTI 270
Score = 27.1 bits (57), Expect = 9.7
Identities = 12/34 (35%), Positives = 19/34 (55%)
Frame = +1
Query: 154 KALENRTNMEDDRVAILEAQLSQANSSPRSRTRK 255
K +ENR+ +++R +EAQL +A RK
Sbjct: 128 KVMENRSLQDEERANTVEAQLKEAQLLAEEADRK 161
>AL132877-4|CAC70112.1| 284|Caenorhabditis elegans Hypothetical
protein Y105E8B.1d protein.
Length = 284
Score = 85.8 bits (203), Expect = 2e-17
Identities = 44/71 (61%), Positives = 53/71 (74%)
Frame = +2
Query: 257 EEVARKLAMVEADLXXXXXXXXXXXXKIVELEEELRVVGNNLKSLEVSEEKATKREETYX 436
+EVARKLAMVEADL KIVELEEELRVVGNNLKSLEVSEEKA +RE++Y
Sbjct: 163 DEVARKLAMVEADLERAEERAEAGENKIVELEEELRVVGNNLKSLEVSEEKALQREDSYE 222
Query: 437 THLKLLDAQLK 469
++ + ++LK
Sbjct: 223 EQIRTVSSRLK 233
Score = 28.7 bits (61), Expect = 3.2
Identities = 15/25 (60%), Positives = 19/25 (76%)
Frame = +1
Query: 508 EKLQKEVDRLEDDLVAEREKSKLLQ 582
+KLQKEVDRLE+ AE K++ LQ
Sbjct: 247 QKLQKEVDRLEELRDAEVLKARQLQ 271
Score = 27.1 bits (57), Expect = 9.7
Identities = 12/34 (35%), Positives = 19/34 (55%)
Frame = +1
Query: 154 KALENRTNMEDDRVAILEAQLSQANSSPRSRTRK 255
K +ENR+ +++R +EAQL +A RK
Sbjct: 128 KVMENRSLQDEERANTVEAQLKEAQLLAEEADRK 161
>AL132877-2|CAC70113.2| 193|Caenorhabditis elegans Hypothetical
protein Y105E8B.1b protein.
Length = 193
Score = 85.8 bits (203), Expect = 2e-17
Identities = 44/71 (61%), Positives = 53/71 (74%)
Frame = +2
Query: 257 EEVARKLAMVEADLXXXXXXXXXXXXKIVELEEELRVVGNNLKSLEVSEEKATKREETYX 436
+EVARKLAMVEADL KIVELEEELRVVGNNLKSLEVSEEKA +RE++Y
Sbjct: 72 DEVARKLAMVEADLERAEERAEAGENKIVELEEELRVVGNNLKSLEVSEEKALQREDSYE 131
Query: 437 THLKLLDAQLK 469
++ + ++LK
Sbjct: 132 EQIRTVSSRLK 142
Score = 28.7 bits (61), Expect = 3.2
Identities = 15/25 (60%), Positives = 19/25 (76%)
Frame = +1
Query: 508 EKLQKEVDRLEDDLVAEREKSKLLQ 582
+KLQKEVDRLE+ AE K++ LQ
Sbjct: 156 QKLQKEVDRLEELRDAEVLKARQLQ 180
Score = 27.1 bits (57), Expect = 9.7
Identities = 12/34 (35%), Positives = 19/34 (55%)
Frame = +1
Query: 154 KALENRTNMEDDRVAILEAQLSQANSSPRSRTRK 255
K +ENR+ +++R +EAQL +A RK
Sbjct: 37 KVMENRSLQDEERANTVEAQLKEAQLLAEEADRK 70
>AL132877-1|CAC70114.1| 284|Caenorhabditis elegans Hypothetical
protein Y105E8B.1a protein.
Length = 284
Score = 85.8 bits (203), Expect = 2e-17
Identities = 44/71 (61%), Positives = 53/71 (74%)
Frame = +2
Query: 257 EEVARKLAMVEADLXXXXXXXXXXXXKIVELEEELRVVGNNLKSLEVSEEKATKREETYX 436
+EVARKLAMVEADL KIVELEEELRVVGNNLKSLEVSEEKA +RE++Y
Sbjct: 163 DEVARKLAMVEADLERAEERAEAGENKIVELEEELRVVGNNLKSLEVSEEKALQREDSYE 222
Query: 437 THLKLLDAQLK 469
++ + ++LK
Sbjct: 223 EQIRTVSSRLK 233
Score = 37.1 bits (82), Expect = 0.009
Identities = 16/24 (66%), Positives = 21/24 (87%)
Frame = +1
Query: 508 EKLQKEVDRLEDDLVAEREKSKLL 579
+KLQKEVDRLED+LV E+E+ K +
Sbjct: 247 QKLQKEVDRLEDELVHEKERYKTI 270
Score = 27.1 bits (57), Expect = 9.7
Identities = 12/34 (35%), Positives = 19/34 (55%)
Frame = +1
Query: 154 KALENRTNMEDDRVAILEAQLSQANSSPRSRTRK 255
K +ENR+ +++R +EAQL +A RK
Sbjct: 128 KVMENRSLQDEERANTVEAQLKEAQLLAEEADRK 161
>Z72502-7|CAA96592.1| 140|Caenorhabditis elegans Hypothetical
protein C08B6.10 protein.
Length = 140
Score = 32.3 bits (70), Expect = 0.26
Identities = 16/40 (40%), Positives = 18/40 (45%), Gaps = 2/40 (5%)
Frame = -2
Query: 150 YSHRIHRRPGWPRTAWRWRSRDAP--RTSRGPPPAVGYVG 37
+ H H RP W R W WR P GPPP G+ G
Sbjct: 101 WHHHHHHRPPWMRGPW-WRRPPPPWGPPPPGPPPPFGWRG 139
>Z82080-4|CAC70117.1| 1125|Caenorhabditis elegans Hypothetical
protein W09G3.6 protein.
Length = 1125
Score = 29.1 bits (62), Expect = 2.4
Identities = 16/48 (33%), Positives = 21/48 (43%)
Frame = -3
Query: 374 YQRHGAPPQAQRFWIRRTRHAPRRAPSQPQPWPAYEQPLRFLVRLLGD 231
+QR+GA PQ+ W RH SQ P E L + R+ D
Sbjct: 803 FQRNGAIPQSHVAWSTLLRHVASVTSSQEAICPKCEMSLSTVERVCSD 850
>AF016687-1|AAC48094.2| 315|Caenorhabditis elegans Dumpy : shorter
than wild-typeprotein 9 protein.
Length = 315
Score = 28.7 bits (61), Expect = 3.2
Identities = 16/44 (36%), Positives = 22/44 (50%), Gaps = 1/44 (2%)
Frame = +2
Query: 5 EKG*VRSGCPE-PTYPTAGGGPREVRGASRDRHRQAVRGQPGRR 133
++G V +G P PT P GPR + G + + GQPG R
Sbjct: 198 DRGKVLNGAPPGPTGPPGKVGPRGLSGGKGHDGKPGLGGQPGVR 241
>U41538-4|AAG00011.1| 175|Caenorhabditis elegans Hypothetical
protein R04E5.9 protein.
Length = 175
Score = 27.5 bits (58), Expect = 7.4
Identities = 16/39 (41%), Positives = 21/39 (53%)
Frame = +1
Query: 448 TTGRPTQRG*STCRVRRAFREKLQKEVDRLEDDLVAERE 564
TT + +G S RV+R REK QK R DD++ E
Sbjct: 76 TTSKSLDKGESIGRVKRYGREKEQKLHIRQNDDVIVVDE 114
>AL110501-1|CAB54509.1| 2129|Caenorhabditis elegans Hypothetical
protein Y79H2A.3a protein.
Length = 2129
Score = 27.5 bits (58), Expect = 7.4
Identities = 15/39 (38%), Positives = 24/39 (61%), Gaps = 1/39 (2%)
Frame = -3
Query: 374 YQRHGAPPQ-AQRFWIRRTRHAPRRAPSQPQPWPAYEQP 261
YQ+ PQ AQ++ I++ + ++AP Q Q P Y+QP
Sbjct: 2039 YQQQPPQPQYAQQYGIQQPIY--QQAPPQQQQQPVYQQP 2075
>AC006620-1|AAF39780.1| 754|Caenorhabditis elegans Hypothetical
protein C51G7.3 protein.
Length = 754
Score = 27.5 bits (58), Expect = 7.4
Identities = 15/39 (38%), Positives = 24/39 (61%), Gaps = 1/39 (2%)
Frame = -3
Query: 374 YQRHGAPPQ-AQRFWIRRTRHAPRRAPSQPQPWPAYEQP 261
YQ+ PQ AQ++ I++ + ++AP Q Q P Y+QP
Sbjct: 664 YQQQPPQPQYAQQYGIQQPIY--QQAPPQQQQQPVYQQP 700
>Z46791-5|CAA86755.2| 948|Caenorhabditis elegans Hypothetical
protein C09G5.6 protein.
Length = 948
Score = 27.1 bits (57), Expect = 9.7
Identities = 11/30 (36%), Positives = 14/30 (46%)
Frame = -1
Query: 583 PAGVCSFRARPPDRLQAYRPPFAVSHGTLG 494
P + FRA PP YRPP ++ G
Sbjct: 135 PRTIQGFRAPPPAATSTYRPPHGSNYDNYG 164
>AF024502-6|AAB70378.4| 402|Caenorhabditis elegans Hypothetical
protein M151.1 protein.
Length = 402
Score = 27.1 bits (57), Expect = 9.7
Identities = 10/28 (35%), Positives = 19/28 (67%)
Frame = +2
Query: 335 KIVELEEELRVVGNNLKSLEVSEEKATK 418
+ ++LE+E+ + NN+ SL V ++K K
Sbjct: 211 RCLQLEQEMEKLSNNISSLTVEKDKEIK 238
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,432,571
Number of Sequences: 27780
Number of extensions: 196105
Number of successful extensions: 886
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 802
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 886
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1215936170
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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