Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= br--1432
         (710 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF592537-1|ABQ95983.1|  593|Tribolium castaneum beta-N-acetylglu...    22   5.7  
AF265213-1|AAF75277.1|  143|Tribolium castaneum putative cytochr...    22   5.7  
AM712903-1|CAN84642.1|  148|Tribolium castaneum hypothetical pro...    21   7.5  
DQ211693-1|ABB16909.1|  314|Tribolium castaneum dorsocross protein.    21   9.9  
AY675073-1|AAV74190.1|  533|Tribolium castaneum chitinase 5 prot...    21   9.9  
AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory recept...    21   9.9  
AM292322-1|CAL23134.1|  373|Tribolium castaneum gustatory recept...    21   9.9  

>EF592537-1|ABQ95983.1|  593|Tribolium castaneum
           beta-N-acetylglucosaminidase NAG2 protein.
          Length = 593

 Score = 21.8 bits (44), Expect = 5.7
 Identities = 5/11 (45%), Positives = 8/11 (72%)
 Frame = +3

Query: 384 FWGRAKFFNWK 416
           FWG  ++ NW+
Sbjct: 493 FWGTTEYHNWR 503


>AF265213-1|AAF75277.1|  143|Tribolium castaneum putative cytochrome
           P450 monooxigenaseCYP4Q3 protein.
          Length = 143

 Score = 21.8 bits (44), Expect = 5.7
 Identities = 8/15 (53%), Positives = 10/15 (66%)
 Frame = +1

Query: 466 VHFIHNKRGQPTMTC 510
           VHFI  K G+  +TC
Sbjct: 79  VHFISRKLGEDFVTC 93


>AM712903-1|CAN84642.1|  148|Tribolium castaneum hypothetical
           protein protein.
          Length = 148

 Score = 21.4 bits (43), Expect = 7.5
 Identities = 10/35 (28%), Positives = 16/35 (45%)
 Frame = +1

Query: 76  LKDMTNLLD*IMYT*CGKKNEFSV*KKNTKIQKLQ 180
           ++D  NL    + T C    +FS   K    +K+Q
Sbjct: 27  MEDANNLTQSTILTTCESNTDFSFGSKTIDFRKIQ 61


>DQ211693-1|ABB16909.1|  314|Tribolium castaneum dorsocross protein.
          Length = 314

 Score = 21.0 bits (42), Expect = 9.9
 Identities = 7/17 (41%), Positives = 12/17 (70%)
 Frame = -2

Query: 304 NFIIFREMLKNYNCRFK 254
           ++ +F EM   ++CRFK
Sbjct: 64  DYCLFLEMTLAHHCRFK 80


>AY675073-1|AAV74190.1|  533|Tribolium castaneum chitinase 5
           protein.
          Length = 533

 Score = 21.0 bits (42), Expect = 9.9
 Identities = 8/20 (40%), Positives = 12/20 (60%)
 Frame = +2

Query: 437 KHSLKTNLCLFILYTIKGVN 496
           +  L  +LC  I+Y+  GVN
Sbjct: 43  QEDLPVDLCTHIVYSFIGVN 62


>AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory receptor
            candidate 46 protein.
          Length = 1451

 Score = 21.0 bits (42), Expect = 9.9
 Identities = 10/25 (40%), Positives = 13/25 (52%)
 Frame = -3

Query: 276  KITIVDLNLLNE*FILNTKGYFERD 202
            KI +  L +LNE    N  G+F  D
Sbjct: 1058 KIEMFSLQILNERAEFNAAGFFPID 1082


>AM292322-1|CAL23134.1|  373|Tribolium castaneum gustatory receptor
           candidate 1 protein.
          Length = 373

 Score = 21.0 bits (42), Expect = 9.9
 Identities = 10/25 (40%), Positives = 13/25 (52%)
 Frame = -3

Query: 276 KITIVDLNLLNE*FILNTKGYFERD 202
           KI +  L +LNE    N  G+F  D
Sbjct: 339 KIEMFSLQILNERAEFNAAGFFPID 363


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 166,042
Number of Sequences: 336
Number of extensions: 3779
Number of successful extensions: 8
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 18843005
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)